Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 Y_RNA.804-201ENST00000615262 101 ntBASIC0.53□□□□□ -2.32
RFC4P35249 RNU6-396P-201ENST00000365369 105 ntBASIC0.52□□□□□ -2.33
RFC4P35249 Y_RNA.418-201ENST00000384029 102 ntBASIC0.52□□□□□ -2.33
RFC4P35249 RNU6-102P-201ENST00000384485 104 ntBASIC0.52□□□□□ -2.33
RFC4P35249 RNU6-308P-201ENST00000390957 107 ntBASIC0.52□□□□□ -2.33
RFC4P35249 MIR1302-11-201ENST00000408051 138 ntBASIC0.52□□□□□ -2.33
RFC4P35249 MIR1302-9-201ENST00000408365 138 ntBASIC0.52□□□□□ -2.33
RFC4P35249 MIR1302-10-201ENST00000408734 138 ntBASIC0.52□□□□□ -2.33
RFC4P35249 RNU6-613P-201ENST00000410412 108 ntBASIC0.52□□□□□ -2.33
RFC4P35249 MTND3P22-201ENST00000510932 243 ntBASIC0.52□□□□□ -2.33
RFC4P35249 MIR2115-201ENST00000516657 100 ntBASIC0.52□□□□□ -2.33
RFC4P35249 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.52□□□□□ -2.33
RFC4P35249 MIR1302-2-201ENST00000607096 138 ntBASIC0.52□□□□□ -2.33
RFC4P35249 AC006441.5-201ENST00000612680 209 ntBASIC0.52□□□□□ -2.33
RFC4P35249 uc_338.22-201ENST00000622722 187 ntBASIC0.52□□□□□ -2.33
RFC4P35249 MIR1-1-201ENST00000362147 71 ntBASIC0.51□□□□□ -2.33
RFC4P35249 MIR369-201ENST00000362155 70 ntBASIC0.51□□□□□ -2.33
RFC4P35249 Y_RNA.424-201ENST00000384063 103 ntBASIC0.51□□□□□ -2.33
RFC4P35249 SNORA50A-201ENST00000384225 134 ntBASIC0.51□□□□□ -2.33
RFC4P35249 RNY3P14-201ENST00000384309 102 ntBASIC0.51□□□□□ -2.33
RFC4P35249 Y_RNA.537-201ENST00000384626 109 ntBASIC0.51□□□□□ -2.33
RFC4P35249 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC0.51□□□□□ -2.33
RFC4P35249 RNU6-763P-201ENST00000390865 106 ntBASIC0.51□□□□□ -2.33
RFC4P35249 RNU1-119P-201ENST00000391122 165 ntBASIC0.51□□□□□ -2.33
RFC4P35249 MIR1827-201ENST00000408549 66 ntBASIC0.51□□□□□ -2.33
RFC4P35249 RNU6-383P-201ENST00000410864 94 ntBASIC0.51□□□□□ -2.33
RFC4P35249 RNA5SP222-201ENST00000411039 105 ntBASIC0.51□□□□□ -2.33
RFC4P35249 AC244098.3-201ENST00000424803 96 ntBASIC0.51□□□□□ -2.33
RFC4P35249 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC0.51□□□□□ -2.33
RFC4P35249 snoU13.21-201ENST00000459368 105 ntBASIC0.51□□□□□ -2.33
RFC4P35249 MRPS35P2-201ENST00000508242 191 ntBASIC0.51□□□□□ -2.33
RFC4P35249 RNU4-57P-201ENST00000515980 135 ntBASIC0.51□□□□□ -2.33
RFC4P35249 RNU6-764P-201ENST00000516396 105 ntBASIC0.51□□□□□ -2.33
RFC4P35249 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.51□□□□□ -2.33
RFC4P35249 AL136317.1-201ENST00000612653 226 ntBASIC0.51□□□□□ -2.33
RFC4P35249 Y_RNA.419-201ENST00000384041 102 ntBASIC0.5□□□□□ -2.33
RFC4P35249 SNORD105-201ENST00000386910 85 ntBASIC0.5□□□□□ -2.33
RFC4P35249 RNU6-205P-201ENST00000390858 107 ntBASIC0.5□□□□□ -2.33
RFC4P35249 RNU6-1248P-201ENST00000391096 64 ntBASIC0.5□□□□□ -2.33
RFC4P35249 MIR4801-201ENST00000582704 82 ntBASIC0.5□□□□□ -2.33
RFC4P35249 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.5□□□□□ -2.33
RFC4P35249 MIR376A1-201ENST00000616574 68 ntBASIC0.5□□□□□ -2.33
RFC4P35249 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.5□□□□□ -2.33
RFC4P35249 Y_RNA.31-201ENST00000362574 102 ntBASIC0.49□□□□□ -2.33
RFC4P35249 Y_RNA.168-201ENST00000363740 102 ntBASIC0.49□□□□□ -2.33
RFC4P35249 Y_RNA.222-201ENST00000364264 102 ntBASIC0.49□□□□□ -2.33
RFC4P35249 RNU6-450P-201ENST00000364654 107 ntBASIC0.49□□□□□ -2.33
RFC4P35249 Y_RNA.494-201ENST00000384432 111 ntBASIC0.49□□□□□ -2.33
RFC4P35249 AC015818.7-201ENST00000428754 109 ntBASIC0.49□□□□□ -2.33
RFC4P35249 AC087499.7-201ENST00000441958 109 ntBASIC0.49□□□□□ -2.33
RFC4P35249 HSPE1P25-201ENST00000455484 251 ntBASIC0.49□□□□□ -2.33
RFC4P35249 RNU7-25P-201ENST00000516544 62 ntBASIC0.49□□□□□ -2.33
RFC4P35249 RNU6-1007P-201ENST00000516586 107 ntBASIC0.49□□□□□ -2.33
RFC4P35249 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
RFC4P35249 AC104695.3-201ENST00000604052 296 ntBASIC0.49□□□□□ -2.33
RFC4P35249 AC124312.5-201ENST00000604451 268 ntBASIC0.49□□□□□ -2.33
RFC4P35249 AL133255.1-201ENST00000606374 441 ntBASIC0.49□□□□□ -2.33
RFC4P35249 AC243994.1-201ENST00000618627 109 ntBASIC0.49□□□□□ -2.33
RFC4P35249 RNU6-1205P-201ENST00000363625 106 ntBASIC0.48□□□□□ -2.33
RFC4P35249 SNORD45.3-201ENST00000363836 72 ntBASIC0.48□□□□□ -2.33
RFC4P35249 RNU6-899P-201ENST00000363947 107 ntBASIC0.48□□□□□ -2.33
RFC4P35249 SNORA1.2-201ENST00000365189 134 ntBASIC0.48□□□□□ -2.33
RFC4P35249 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
RFC4P35249 RNU6-945P-201ENST00000383947 107 ntBASIC0.48□□□□□ -2.33
RFC4P35249 RNY1P8-201ENST00000383970 114 ntBASIC0.48□□□□□ -2.33
RFC4P35249 SNORA36.2-201ENST00000384004 127 ntBASIC0.48□□□□□ -2.33
RFC4P35249 RNU6-125P-201ENST00000384505 107 ntBASIC0.48□□□□□ -2.33
RFC4P35249 Y_RNA.547-201ENST00000384654 119 ntBASIC0.48□□□□□ -2.33
RFC4P35249 Y_RNA.645-201ENST00000391229 102 ntBASIC0.48□□□□□ -2.33
RFC4P35249 RNU6-847P-201ENST00000411115 108 ntBASIC0.48□□□□□ -2.33
RFC4P35249 MTND4P19-201ENST00000446659 478 ntBASIC0.48□□□□□ -2.33
RFC4P35249 RNU6-475P-201ENST00000516073 104 ntBASIC0.48□□□□□ -2.33
RFC4P35249 RNA5SP395-201ENST00000516567 118 ntBASIC0.48□□□□□ -2.33
RFC4P35249 AC023932.2-201ENST00000603176 175 ntBASIC0.48□□□□□ -2.33
RFC4P35249 AL360085.1-201ENST00000604713 532 ntBASIC0.48□□□□□ -2.33
RFC4P35249 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.48□□□□□ -2.33
RFC4P35249 RNU6-369P-201ENST00000362515 102 ntBASIC0.47□□□□□ -2.33
RFC4P35249 Y_RNA.280-201ENST00000364765 112 ntBASIC0.47□□□□□ -2.33
RFC4P35249 Y_RNA.569-201ENST00000384749 103 ntBASIC0.47□□□□□ -2.33
RFC4P35249 RNA5SP63-201ENST00000391225 112 ntBASIC0.47□□□□□ -2.33
RFC4P35249 SNORD83.1-201ENST00000411362 77 ntBASIC0.47□□□□□ -2.33
RFC4P35249 AC090844.1-201ENST00000422019 156 ntBASIC0.47□□□□□ -2.33
RFC4P35249 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.47□□□□□ -2.33
RFC4P35249 Y_RNA.637-201ENST00000459424 114 ntBASIC0.47□□□□□ -2.33
RFC4P35249 RNU2-13P-201ENST00000515909 113 ntBASIC0.47□□□□□ -2.33
RFC4P35249 RNU6-1170P-201ENST00000515974 106 ntBASIC0.47□□□□□ -2.33
RFC4P35249 RNU6-897P-201ENST00000517135 105 ntBASIC0.47□□□□□ -2.33
RFC4P35249 AL049861.1-201ENST00000603130 150 ntBASIC0.47□□□□□ -2.33
RFC4P35249 AC022140.2-201ENST00000623500 188 ntBASIC0.47□□□□□ -2.33
RFC4P35249 Y_RNA.105-201ENST00000363182 111 ntBASIC0.46□□□□□ -2.34
RFC4P35249 SNORD18A-201ENST00000363753 72 ntBASIC0.46□□□□□ -2.34
RFC4P35249 SNORD115-46-201ENST00000390982 71 ntBASIC0.46□□□□□ -2.34
RFC4P35249 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.46□□□□□ -2.34
RFC4P35249 MTCO1P5-201ENST00000433573 344 ntBASIC0.46□□□□□ -2.34
RFC4P35249 SCARNA8-201ENST00000515924 131 ntBASIC0.46□□□□□ -2.34
RFC4P35249 Y_RNA.666-201ENST00000516187 112 ntBASIC0.46□□□□□ -2.34
RFC4P35249 RNU7-149P-201ENST00000516739 59 ntBASIC0.46□□□□□ -2.34
RFC4P35249 RAC1P9-201ENST00000604990 392 ntBASIC0.46□□□□□ -2.34
RFC4P35249 Y_RNA.183-201ENST00000363882 113 ntBASIC0.45□□□□□ -2.34
RFC4P35249 RNU6-934P-201ENST00000365154 107 ntBASIC0.45□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms