Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 NAA50-211ENST00000630058 177 ntTSL 5 BASIC-0.33□□□□□ -2.46
COL4A5P29400 AC090582.1-201ENST00000636321 199 ntBASIC-0.33□□□□□ -2.46
COL4A5P29400 AC010332.2-201ENST00000613083 1904 ntBASIC-0.34□□□□□ -2.46
COL4A5P29400 RNU6-1209P-201ENST00000363655 107 ntBASIC-0.34□□□□□ -2.46
COL4A5P29400 RNY3P3-201ENST00000363816 102 ntBASIC-0.34□□□□□ -2.46
COL4A5P29400 SNORA1.1-201ENST00000364671 133 ntBASIC-0.34□□□□□ -2.46
COL4A5P29400 MIR196A2-201ENST00000385189 110 ntBASIC-0.34□□□□□ -2.46
COL4A5P29400 MTND4P28-201ENST00000426217 387 ntBASIC-0.34□□□□□ -2.46
COL4A5P29400 MTATP6P23-201ENST00000440153 476 ntBASIC-0.34□□□□□ -2.46
COL4A5P29400 RNU6-864P-201ENST00000516256 108 ntBASIC-0.34□□□□□ -2.46
COL4A5P29400 RNU6-314P-201ENST00000516574 104 ntBASIC-0.34□□□□□ -2.46
COL4A5P29400 RNU6-273P-201ENST00000516937 96 ntBASIC-0.34□□□□□ -2.46
COL4A5P29400 AC145350.1-201ENST00000567426 208 ntBASIC-0.34□□□□□ -2.46
COL4A5P29400 AC018462.2-201ENST00000605375 395 ntBASIC-0.34□□□□□ -2.46
COL4A5P29400 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC-0.34□□□□□ -2.46
COL4A5P29400 RN7SL660P-201ENST00000614852 299 ntBASIC-0.34□□□□□ -2.46
COL4A5P29400 MIR548AZ-201ENST00000616567 95 ntBASIC-0.34□□□□□ -2.46
COL4A5P29400 PISRT1.1-201ENST00000616930 107 ntBASIC-0.34□□□□□ -2.46
COL4A5P29400 AL359880.1-201ENST00000621879 266 ntBASIC-0.34□□□□□ -2.46
COL4A5P29400 AC078883.4-201ENST00000623218 367 ntBASIC-0.34□□□□□ -2.46
COL4A5P29400 MIR1321-201ENST00000637766 79 ntBASIC-0.34□□□□□ -2.46
COL4A5P29400 RNU6-1309P-201ENST00000363305 108 ntBASIC-0.35□□□□□ -2.47
COL4A5P29400 Y_RNA.203-201ENST00000364106 102 ntBASIC-0.35□□□□□ -2.47
COL4A5P29400 Y_RNA.310-201ENST00000365063 113 ntBASIC-0.35□□□□□ -2.47
COL4A5P29400 Y_RNA.329-201ENST00000365209 107 ntBASIC-0.35□□□□□ -2.47
COL4A5P29400 MIR588-201ENST00000384900 83 ntBASIC-0.35□□□□□ -2.47
COL4A5P29400 RNU6-127P-201ENST00000390897 107 ntBASIC-0.35□□□□□ -2.47
COL4A5P29400 RNU2-66P-201ENST00000410650 161 ntBASIC-0.35□□□□□ -2.47
COL4A5P29400 RNU6-1199P-201ENST00000411249 104 ntBASIC-0.35□□□□□ -2.47
COL4A5P29400 AC087499.4-201ENST00000448505 178 ntBASIC-0.35□□□□□ -2.47
COL4A5P29400 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC-0.35□□□□□ -2.47
COL4A5P29400 RNU6-138P-201ENST00000515952 107 ntBASIC-0.35□□□□□ -2.47
COL4A5P29400 RNU6-1170P-201ENST00000515974 106 ntBASIC-0.35□□□□□ -2.47
COL4A5P29400 RNU6-155P-201ENST00000516347 100 ntBASIC-0.35□□□□□ -2.47
COL4A5P29400 RNU6-1012P-201ENST00000516606 109 ntBASIC-0.35□□□□□ -2.47
COL4A5P29400 AC144568.1-201ENST00000520139 137 ntBASIC-0.35□□□□□ -2.47
COL4A5P29400 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC-0.35□□□□□ -2.47
COL4A5P29400 MIR5701-3-201ENST00000578890 82 ntBASIC-0.35□□□□□ -2.47
COL4A5P29400 MIR5701-1-201ENST00000585138 82 ntBASIC-0.35□□□□□ -2.47
COL4A5P29400 AL080274.1-201ENST00000605565 220 ntBASIC-0.35□□□□□ -2.47
COL4A5P29400 AC022441.3-201ENST00000605737 136 ntBASIC-0.35□□□□□ -2.47
COL4A5P29400 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC-0.35□□□□□ -2.47
COL4A5P29400 Y_RNA.804-201ENST00000615262 101 ntBASIC-0.35□□□□□ -2.47
COL4A5P29400 MIR5701-2-201ENST00000615634 82 ntBASIC-0.35□□□□□ -2.47
COL4A5P29400 SNORD115-34-201ENST00000362441 82 ntBASIC-0.36□□□□□ -2.47
COL4A5P29400 SNORD115-12-201ENST00000362583 82 ntBASIC-0.36□□□□□ -2.47
COL4A5P29400 Y_RNA.38-201ENST00000362617 102 ntBASIC-0.36□□□□□ -2.47
COL4A5P29400 SNORD115-29-201ENST00000362834 82 ntBASIC-0.36□□□□□ -2.47
COL4A5P29400 SNORD115-9-201ENST00000362912 82 ntBASIC-0.36□□□□□ -2.47
COL4A5P29400 Y_RNA.77-201ENST00000362962 107 ntBASIC-0.36□□□□□ -2.47
COL4A5P29400 SNORD115-21-201ENST00000362963 81 ntBASIC-0.36□□□□□ -2.47
COL4A5P29400 SNORD115-14-201ENST00000363090 81 ntBASIC-0.36□□□□□ -2.47
COL4A5P29400 SNORD115-13-201ENST00000363358 82 ntBASIC-0.36□□□□□ -2.47
COL4A5P29400 SNORD115-11-201ENST00000363616 82 ntBASIC-0.36□□□□□ -2.47
COL4A5P29400 SNORD115-5-201ENST00000363633 82 ntBASIC-0.36□□□□□ -2.47
COL4A5P29400 SNORD115-39-201ENST00000363694 82 ntBASIC-0.36□□□□□ -2.47
COL4A5P29400 SNORD115-4-201ENST00000363810 82 ntBASIC-0.36□□□□□ -2.47
COL4A5P29400 SNORD115-16-201ENST00000363887 82 ntBASIC-0.36□□□□□ -2.47
COL4A5P29400 SNORD115-6-201ENST00000363942 82 ntBASIC-0.36□□□□□ -2.47
COL4A5P29400 SNORD115-42-201ENST00000364273 82 ntBASIC-0.36□□□□□ -2.47
COL4A5P29400 Y_RNA.241-201ENST00000364470 117 ntBASIC-0.36□□□□□ -2.47
COL4A5P29400 RNU4-75P-201ENST00000364621 146 ntBASIC-0.36□□□□□ -2.47
COL4A5P29400 RNU6-593P-201ENST00000364716 112 ntBASIC-0.36□□□□□ -2.47
COL4A5P29400 SNORD115-15-201ENST00000364809 81 ntBASIC-0.36□□□□□ -2.47
COL4A5P29400 SNORD115-1-201ENST00000364961 82 ntBASIC-0.36□□□□□ -2.47
COL4A5P29400 SNORD115-26-201ENST00000365067 82 ntBASIC-0.36□□□□□ -2.47
COL4A5P29400 SNORD115-10-201ENST00000365073 81 ntBASIC-0.36□□□□□ -2.47
COL4A5P29400 SNORD115-43-201ENST00000365503 82 ntBASIC-0.36□□□□□ -2.47
COL4A5P29400 SNORD115-36-201ENST00000365629 82 ntBASIC-0.36□□□□□ -2.47
COL4A5P29400 Y_RNA.553-201ENST00000384670 102 ntBASIC-0.36□□□□□ -2.47
COL4A5P29400 RNU6-510P-201ENST00000391239 108 ntBASIC-0.36□□□□□ -2.47
COL4A5P29400 SNORD75.1-201ENST00000408373 60 ntBASIC-0.36□□□□□ -2.47
COL4A5P29400 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC-0.36□□□□□ -2.47
COL4A5P29400 CHEK2P4-201ENST00000450340 246 ntBASIC-0.36□□□□□ -2.47
COL4A5P29400 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC-0.36□□□□□ -2.47
COL4A5P29400 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC-0.36□□□□□ -2.47
COL4A5P29400 AC024405.2-202ENST00000532731 184 ntBASIC-0.36□□□□□ -2.47
COL4A5P29400 SNORD115-40-201ENST00000606510 82 ntBASIC-0.36□□□□□ -2.47
COL4A5P29400 AC024933.1-201ENST00000608472 348 ntBASIC-0.36□□□□□ -2.47
COL4A5P29400 Z97988.1-201ENST00000637697 135 ntBASIC-0.36□□□□□ -2.47
COL4A5P29400 RNU6-99P-201ENST00000364721 107 ntBASIC-0.37□□□□□ -2.47
COL4A5P29400 RNU6-20P-201ENST00000384106 107 ntBASIC-0.37□□□□□ -2.47
COL4A5P29400 Y_RNA.494-201ENST00000384432 111 ntBASIC-0.37□□□□□ -2.47
COL4A5P29400 RNU6-1248P-201ENST00000391096 64 ntBASIC-0.37□□□□□ -2.47
COL4A5P29400 RNA5SP300-201ENST00000391197 107 ntBASIC-0.37□□□□□ -2.47
COL4A5P29400 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC-0.37□□□□□ -2.47
COL4A5P29400 AC019235.1-201ENST00000503847 207 ntBASIC-0.37□□□□□ -2.47
COL4A5P29400 AC010424.1-201ENST00000506336 297 ntBASIC-0.37□□□□□ -2.47
COL4A5P29400 SNORA18.4-201ENST00000516440 124 ntBASIC-0.37□□□□□ -2.47
COL4A5P29400 MTND3P12-201ENST00000559068 328 ntBASIC-0.37□□□□□ -2.47
COL4A5P29400 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC-0.37□□□□□ -2.47
COL4A5P29400 MIR5706-201ENST00000579841 80 ntBASIC-0.37□□□□□ -2.47
COL4A5P29400 MIR6828-201ENST00000636181 60 ntBASIC-0.37□□□□□ -2.47
COL4A5P29400 RNU4-32P-201ENST00000363404 141 ntBASIC-0.37□□□□□ -2.47
COL4A5P29400 RNU6-1229P-201ENST00000364295 107 ntBASIC-0.37□□□□□ -2.47
COL4A5P29400 Y_RNA.230-201ENST00000364348 109 ntBASIC-0.37□□□□□ -2.47
COL4A5P29400 RNA5SP205-201ENST00000364653 136 ntBASIC-0.37□□□□□ -2.47
COL4A5P29400 Y_RNA.301-201ENST00000364990 103 ntBASIC-0.37□□□□□ -2.47
COL4A5P29400 MIR548O-201ENST00000408583 114 ntBASIC-0.37□□□□□ -2.47
COL4A5P29400 RNA5SP163-201ENST00000410304 99 ntBASIC-0.37□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 123.1 ms