Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 Y_RNA.241-201ENST00000364470 117 ntBASIC0.35□□□□□ -2.35
HLA-DPA1P20036 Y_RNA.813-201ENST00000364639 102 ntBASIC0.35□□□□□ -2.35
HLA-DPA1P20036 RNY1P4-201ENST00000384595 115 ntBASIC0.35□□□□□ -2.35
HLA-DPA1P20036 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.35□□□□□ -2.35
HLA-DPA1P20036 AC244023.1-201ENST00000426884 112 ntBASIC0.35□□□□□ -2.35
HLA-DPA1P20036 RNA5SP134-201ENST00000516492 96 ntBASIC0.35□□□□□ -2.35
HLA-DPA1P20036 AC242498.1-201ENST00000604134 111 ntBASIC0.35□□□□□ -2.35
HLA-DPA1P20036 AC022140.2-201ENST00000623500 188 ntBASIC0.35□□□□□ -2.35
HLA-DPA1P20036 RNU6-1205P-201ENST00000363625 106 ntBASIC0.34□□□□□ -2.36
HLA-DPA1P20036 Y_RNA.390-201ENST00000383932 102 ntBASIC0.34□□□□□ -2.36
HLA-DPA1P20036 RNU6-144P-201ENST00000383951 107 ntBASIC0.34□□□□□ -2.36
HLA-DPA1P20036 SNORA24-201ENST00000384096 131 ntBASIC0.34□□□□□ -2.36
HLA-DPA1P20036 RNU6-308P-201ENST00000390957 107 ntBASIC0.34□□□□□ -2.36
HLA-DPA1P20036 RBMX2P4-201ENST00000441256 376 ntBASIC0.34□□□□□ -2.36
HLA-DPA1P20036 RNU6-1170P-201ENST00000515974 106 ntBASIC0.34□□□□□ -2.36
HLA-DPA1P20036 RNU6-976P-201ENST00000516086 111 ntBASIC0.34□□□□□ -2.36
HLA-DPA1P20036 RNU6-191P-201ENST00000516295 94 ntBASIC0.34□□□□□ -2.36
HLA-DPA1P20036 RNU7-149P-201ENST00000516739 59 ntBASIC0.34□□□□□ -2.36
HLA-DPA1P20036 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.34□□□□□ -2.36
HLA-DPA1P20036 AC020891.4-201ENST00000605745 93 ntBASIC0.34□□□□□ -2.36
HLA-DPA1P20036 AC092634.7-201ENST00000621022 103 ntBASIC0.34□□□□□ -2.36
HLA-DPA1P20036 AC090625.1-201ENST00000357130 210 ntBASIC0.33□□□□□ -2.36
HLA-DPA1P20036 Y_RNA.5-201ENST00000362334 102 ntBASIC0.33□□□□□ -2.36
HLA-DPA1P20036 RNU7-56P-201ENST00000458744 62 ntBASIC0.33□□□□□ -2.36
HLA-DPA1P20036 RNU6-958P-201ENST00000516995 106 ntBASIC0.33□□□□□ -2.36
HLA-DPA1P20036 AC040926.1-201ENST00000530195 238 ntBASIC0.33□□□□□ -2.36
HLA-DPA1P20036 SNORD115-34-201ENST00000362441 82 ntBASIC0.32□□□□□ -2.36
HLA-DPA1P20036 SNORD115-12-201ENST00000362583 82 ntBASIC0.32□□□□□ -2.36
HLA-DPA1P20036 Y_RNA.36-201ENST00000362602 112 ntBASIC0.32□□□□□ -2.36
HLA-DPA1P20036 SNORD115-29-201ENST00000362834 82 ntBASIC0.32□□□□□ -2.36
HLA-DPA1P20036 SNORD115-9-201ENST00000362912 82 ntBASIC0.32□□□□□ -2.36
HLA-DPA1P20036 SNORD115-21-201ENST00000362963 81 ntBASIC0.32□□□□□ -2.36
HLA-DPA1P20036 SNORD115-14-201ENST00000363090 81 ntBASIC0.32□□□□□ -2.36
HLA-DPA1P20036 SNORD115-13-201ENST00000363358 82 ntBASIC0.32□□□□□ -2.36
HLA-DPA1P20036 SNORD115-41-201ENST00000363608 82 ntBASIC0.32□□□□□ -2.36
HLA-DPA1P20036 SNORD115-11-201ENST00000363616 82 ntBASIC0.32□□□□□ -2.36
HLA-DPA1P20036 SNORD115-5-201ENST00000363633 82 ntBASIC0.32□□□□□ -2.36
HLA-DPA1P20036 SNORD115-39-201ENST00000363694 82 ntBASIC0.32□□□□□ -2.36
HLA-DPA1P20036 SNORD115-4-201ENST00000363810 82 ntBASIC0.32□□□□□ -2.36
HLA-DPA1P20036 SNORD115-16-201ENST00000363887 82 ntBASIC0.32□□□□□ -2.36
HLA-DPA1P20036 SNORD115-6-201ENST00000363942 82 ntBASIC0.32□□□□□ -2.36
HLA-DPA1P20036 SNORD115-42-201ENST00000364273 82 ntBASIC0.32□□□□□ -2.36
HLA-DPA1P20036 SNORA63C-201ENST00000364578 129 ntBASIC0.32□□□□□ -2.36
HLA-DPA1P20036 SNORD115-15-201ENST00000364809 81 ntBASIC0.32□□□□□ -2.36
HLA-DPA1P20036 SNORD115-1-201ENST00000364961 82 ntBASIC0.32□□□□□ -2.36
HLA-DPA1P20036 SNORD115-26-201ENST00000365067 82 ntBASIC0.32□□□□□ -2.36
HLA-DPA1P20036 SNORD115-10-201ENST00000365073 81 ntBASIC0.32□□□□□ -2.36
HLA-DPA1P20036 SNORD115-43-201ENST00000365503 82 ntBASIC0.32□□□□□ -2.36
HLA-DPA1P20036 SNORD115-36-201ENST00000365629 82 ntBASIC0.32□□□□□ -2.36
HLA-DPA1P20036 Y_RNA.494-201ENST00000384432 111 ntBASIC0.32□□□□□ -2.36
HLA-DPA1P20036 Y_RNA.540-201ENST00000384638 111 ntBASIC0.32□□□□□ -2.36
HLA-DPA1P20036 RNU6-679P-201ENST00000391003 106 ntBASIC0.32□□□□□ -2.36
HLA-DPA1P20036 MIR938-201ENST00000401216 83 ntBASIC0.32□□□□□ -2.36
HLA-DPA1P20036 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.32□□□□□ -2.36
HLA-DPA1P20036 SNORD115-40-201ENST00000606510 82 ntBASIC0.32□□□□□ -2.36
HLA-DPA1P20036 PART1_1.1-201ENST00000611761 217 ntBASIC0.32□□□□□ -2.36
HLA-DPA1P20036 SNORD38B-201ENST00000384690 67 ntBASIC0.31□□□□□ -2.36
HLA-DPA1P20036 RNU6-130P-201ENST00000411112 103 ntBASIC0.31□□□□□ -2.36
HLA-DPA1P20036 AC002350.1-201ENST00000490759 375 ntBASIC0.31□□□□□ -2.36
HLA-DPA1P20036 AC091959.1-201ENST00000495857 238 ntBASIC0.31□□□□□ -2.36
HLA-DPA1P20036 FGF7P4-201ENST00000509595 295 ntBASIC0.31□□□□□ -2.36
HLA-DPA1P20036 SNORA18.4-201ENST00000516440 124 ntBASIC0.31□□□□□ -2.36
HLA-DPA1P20036 RNA5SP480-201ENST00000516840 109 ntBASIC0.31□□□□□ -2.36
HLA-DPA1P20036 AC006157.1-201ENST00000611750 366 ntBASIC0.31□□□□□ -2.36
HLA-DPA1P20036 SNORD38B-202ENST00000625943 69 ntBASIC0.31□□□□□ -2.36
HLA-DPA1P20036 Y_RNA.222-201ENST00000364264 102 ntBASIC0.3□□□□□ -2.36
HLA-DPA1P20036 Y_RNA.418-201ENST00000384029 102 ntBASIC0.3□□□□□ -2.36
HLA-DPA1P20036 RNU6-763P-201ENST00000390865 106 ntBASIC0.3□□□□□ -2.36
HLA-DPA1P20036 RNU6-383P-201ENST00000410864 94 ntBASIC0.3□□□□□ -2.36
HLA-DPA1P20036 Y_RNA.666-201ENST00000516187 112 ntBASIC0.3□□□□□ -2.36
HLA-DPA1P20036 RNU6-764P-201ENST00000516396 105 ntBASIC0.3□□□□□ -2.36
HLA-DPA1P20036 AC010487.4-201ENST00000637027 61 ntBASIC0.3□□□□□ -2.36
HLA-DPA1P20036 Y_RNA.14-201ENST00000362415 103 ntBASIC0.29□□□□□ -2.36
HLA-DPA1P20036 SNORA72.1-201ENST00000363485 129 ntBASIC0.29□□□□□ -2.36
HLA-DPA1P20036 SNORD113-8-201ENST00000363497 74 ntBASIC0.29□□□□□ -2.36
HLA-DPA1P20036 BTF3P11-201ENST00000426582 477 ntBASIC0.29□□□□□ -2.36
HLA-DPA1P20036 AC087499.4-201ENST00000448505 178 ntBASIC0.29□□□□□ -2.36
HLA-DPA1P20036 SNORA25.12-201ENST00000516202 82 ntBASIC0.29□□□□□ -2.36
HLA-DPA1P20036 RNU6-1046P-201ENST00000516538 107 ntBASIC0.29□□□□□ -2.36
HLA-DPA1P20036 AL049861.1-201ENST00000603130 150 ntBASIC0.29□□□□□ -2.36
HLA-DPA1P20036 uc_338.6-201ENST00000613544 171 ntBASIC0.29□□□□□ -2.36
HLA-DPA1P20036 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
HLA-DPA1P20036 AC010332.2-201ENST00000613083 1904 ntBASIC0.28□□□□□ -2.36
HLA-DPA1P20036 SNORD115-28-201ENST00000363931 81 ntBASIC0.28□□□□□ -2.36
HLA-DPA1P20036 MIR193B-201ENST00000384907 83 ntBASIC0.28□□□□□ -2.36
HLA-DPA1P20036 RNA5SP496-201ENST00000391240 109 ntBASIC0.28□□□□□ -2.36
HLA-DPA1P20036 MIR18B-201ENST00000454574 71 ntBASIC0.28□□□□□ -2.36
HLA-DPA1P20036 AP000942.4-201ENST00000604811 241 ntBASIC0.28□□□□□ -2.36
HLA-DPA1P20036 MIR6740-201ENST00000618268 113 ntBASIC0.28□□□□□ -2.36
HLA-DPA1P20036 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.27□□□□□ -2.37
HLA-DPA1P20036 RNU6-1327P-201ENST00000365302 105 ntBASIC0.27□□□□□ -2.37
HLA-DPA1P20036 RNU6-1138P-201ENST00000365359 106 ntBASIC0.27□□□□□ -2.37
HLA-DPA1P20036 RNU6-364P-201ENST00000384387 107 ntBASIC0.27□□□□□ -2.37
HLA-DPA1P20036 RNU7-73P-201ENST00000458743 63 ntBASIC0.27□□□□□ -2.37
HLA-DPA1P20036 MRPS35P2-201ENST00000508242 191 ntBASIC0.27□□□□□ -2.37
HLA-DPA1P20036 RNU6-475P-201ENST00000516073 104 ntBASIC0.27□□□□□ -2.37
HLA-DPA1P20036 C8orf59P2-201ENST00000603441 271 ntBASIC0.27□□□□□ -2.37
HLA-DPA1P20036 AL021707.8-201ENST00000609428 183 ntBASIC0.27□□□□□ -2.37
HLA-DPA1P20036 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.27□□□□□ -2.37
HLA-DPA1P20036 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.26□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 183.7 ms