Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.16□□□□□ -2.06
KRT4P19013 MIR2052-201ENST00000636055 55 ntBASIC2.16□□□□□ -2.06
KRT4P19013 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.06
KRT4P19013 RNU6-1084P-201ENST00000362498 107 ntBASIC2.15□□□□□ -2.07
KRT4P19013 Y_RNA.37-201ENST00000362606 108 ntBASIC2.15□□□□□ -2.07
KRT4P19013 Y_RNA.99-201ENST00000363138 105 ntBASIC2.15□□□□□ -2.07
KRT4P19013 SNORD68-201ENST00000363214 84 ntBASIC2.15□□□□□ -2.07
KRT4P19013 RNA5SP160-201ENST00000364866 120 ntBASIC2.15□□□□□ -2.07
KRT4P19013 RNU1-133P-201ENST00000364867 167 ntBASIC2.15□□□□□ -2.07
KRT4P19013 Y_RNA.298-201ENST00000364960 107 ntBASIC2.15□□□□□ -2.07
KRT4P19013 snoU2-30.1-201ENST00000365012 70 ntBASIC2.15□□□□□ -2.07
KRT4P19013 RNA5SP138-201ENST00000365098 114 ntBASIC2.15□□□□□ -2.07
KRT4P19013 RNY1P6-201ENST00000384193 109 ntBASIC2.15□□□□□ -2.07
KRT4P19013 RNU6-49P-201ENST00000384256 107 ntBASIC2.15□□□□□ -2.07
KRT4P19013 U8.17-201ENST00000391292 132 ntBASIC2.15□□□□□ -2.07
KRT4P19013 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.15□□□□□ -2.07
KRT4P19013 RNA5SP356-201ENST00000515972 94 ntBASIC2.15□□□□□ -2.07
KRT4P19013 RNA5SP200-201ENST00000516360 103 ntBASIC2.15□□□□□ -2.07
KRT4P19013 RNU7-25P-201ENST00000516544 62 ntBASIC2.15□□□□□ -2.07
KRT4P19013 MIR4778-201ENST00000577635 80 ntBASIC2.15□□□□□ -2.07
KRT4P19013 MIR7106-201ENST00000612419 65 ntBASIC2.15□□□□□ -2.07
KRT4P19013 uc_338.20-201ENST00000621563 178 ntBASIC2.15□□□□□ -2.07
KRT4P19013 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
KRT4P19013 RNU6-268P-201ENST00000364174 107 ntBASIC2.14□□□□□ -2.07
KRT4P19013 Y_RNA.336-201ENST00000365307 109 ntBASIC2.14□□□□□ -2.07
KRT4P19013 RPS3AP1-201ENST00000413190 320 ntBASIC2.14□□□□□ -2.07
KRT4P19013 CST2P1-201ENST00000425770 87 ntBASIC2.14□□□□□ -2.07
KRT4P19013 AL445646.1-201ENST00000431784 216 ntBASIC2.14□□□□□ -2.07
KRT4P19013 SNRPGP14-201ENST00000435400 219 ntBASIC2.14□□□□□ -2.07
KRT4P19013 AC087499.4-201ENST00000448505 178 ntBASIC2.14□□□□□ -2.07
KRT4P19013 RNU7-80P-201ENST00000459562 61 ntBASIC2.14□□□□□ -2.07
KRT4P19013 RNU6-830P-201ENST00000516353 107 ntBASIC2.14□□□□□ -2.07
KRT4P19013 SUMO2P16-201ENST00000519475 264 ntBASIC2.14□□□□□ -2.07
KRT4P19013 AC084364.2-201ENST00000546924 395 ntBASIC2.14□□□□□ -2.07
KRT4P19013 MIR6132-201ENST00000622083 109 ntBASIC2.14□□□□□ -2.07
KRT4P19013 CTSLP2-204ENST00000629029 392 ntBASIC2.14□□□□□ -2.07
KRT4P19013 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.14□□□□□ -2.07
KRT4P19013 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
KRT4P19013 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
KRT4P19013 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
KRT4P19013 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
KRT4P19013 AL365361.1-201ENST00000566942 3481 ntBASIC2.13□□□□□ -2.07
KRT4P19013 Y_RNA.220-201ENST00000364244 109 ntBASIC2.13□□□□□ -2.07
KRT4P19013 Y_RNA.440-201ENST00000384120 114 ntBASIC2.13□□□□□ -2.07
KRT4P19013 Y_RNA.454-201ENST00000384224 113 ntBASIC2.13□□□□□ -2.07
KRT4P19013 Y_RNA.547-201ENST00000384654 119 ntBASIC2.13□□□□□ -2.07
KRT4P19013 MIR518A2-201ENST00000384966 87 ntBASIC2.13□□□□□ -2.07
KRT4P19013 MIR590-201ENST00000385008 97 ntBASIC2.13□□□□□ -2.07
KRT4P19013 RNU7-164P-201ENST00000459221 62 ntBASIC2.13□□□□□ -2.07
KRT4P19013 RNA5SP364-201ENST00000516938 78 ntBASIC2.13□□□□□ -2.07
KRT4P19013 MIR3683-201ENST00000580847 82 ntBASIC2.13□□□□□ -2.07
KRT4P19013 MIR3163-201ENST00000581592 73 ntBASIC2.13□□□□□ -2.07
KRT4P19013 AC006386.2-201ENST00000624491 75 ntBASIC2.13□□□□□ -2.07
KRT4P19013 AC012005.1-201ENST00000624575 75 ntBASIC2.13□□□□□ -2.07
KRT4P19013 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.13□□□□□ -2.07
KRT4P19013 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.13□□□□□ -2.07
KRT4P19013 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.12□□□□□ -2.07
KRT4P19013 MIR208A-201ENST00000362287 71 ntBASIC2.12□□□□□ -2.07
KRT4P19013 SNORA33-201ENST00000363664 130 ntBASIC2.12□□□□□ -2.07
KRT4P19013 Y_RNA.388-201ENST00000383919 113 ntBASIC2.12□□□□□ -2.07
KRT4P19013 RNU6-160P-201ENST00000384591 107 ntBASIC2.12□□□□□ -2.07
KRT4P19013 MIR548D2-201ENST00000384955 97 ntBASIC2.12□□□□□ -2.07
KRT4P19013 RNA5SP482-201ENST00000391269 118 ntBASIC2.12□□□□□ -2.07
KRT4P19013 AL163195.1-201ENST00000496941 348 ntBASIC2.12□□□□□ -2.07
KRT4P19013 SNORD45.4-201ENST00000516629 73 ntBASIC2.12□□□□□ -2.07
KRT4P19013 RNU7-28P-201ENST00000516759 62 ntBASIC2.12□□□□□ -2.07
KRT4P19013 AP003484.1-201ENST00000530974 250 ntBASIC2.12□□□□□ -2.07
KRT4P19013 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.12□□□□□ -2.07
KRT4P19013 DLEU2_5.2-201ENST00000610606 84 ntBASIC2.12□□□□□ -2.07
KRT4P19013 SNORA80A-201ENST00000363922 136 ntBASIC2.11□□□□□ -2.07
KRT4P19013 SNORD114-6-201ENST00000364393 72 ntBASIC2.11□□□□□ -2.07
KRT4P19013 Y_RNA.344-201ENST00000365381 112 ntBASIC2.11□□□□□ -2.07
KRT4P19013 MIR488-201ENST00000365739 83 ntBASIC2.11□□□□□ -2.07
KRT4P19013 MT-TI-201ENST00000387365 69 ntBASIC2.11□□□□□ -2.07
KRT4P19013 MIR676-201ENST00000390702 67 ntBASIC2.11□□□□□ -2.07
KRT4P19013 AL627390.1-201ENST00000396055 340 ntBASIC2.11□□□□□ -2.07
KRT4P19013 MTATP8P2-201ENST00000435212 202 ntBASIC2.11□□□□□ -2.07
KRT4P19013 RNU6-904P-201ENST00000516206 101 ntBASIC2.11□□□□□ -2.07
KRT4P19013 RNU6-109P-201ENST00000516364 107 ntBASIC2.11□□□□□ -2.07
KRT4P19013 RNU6-184P-201ENST00000516514 107 ntBASIC2.11□□□□□ -2.07
KRT4P19013 SNORD36C-201ENST00000516733 66 ntBASIC2.11□□□□□ -2.07
KRT4P19013 SNORA18.7-201ENST00000516910 131 ntBASIC2.11□□□□□ -2.07
KRT4P19013 RNU6-762P-201ENST00000517107 102 ntBASIC2.11□□□□□ -2.07
KRT4P19013 MIR4305-201ENST00000583252 102 ntBASIC2.11□□□□□ -2.07
KRT4P19013 AL442128.1-201ENST00000615151 90 ntBASIC2.11□□□□□ -2.07
KRT4P19013 AL162726.3-218ENST00000636401 95 ntBASIC2.11□□□□□ -2.07
KRT4P19013 MIR302B-201ENST00000362188 73 ntBASIC2.1□□□□□ -2.07
KRT4P19013 Y_RNA.351-201ENST00000365436 96 ntBASIC2.1□□□□□ -2.07
KRT4P19013 MIR1912-201ENST00000410389 80 ntBASIC2.1□□□□□ -2.07
KRT4P19013 RNU6-938P-201ENST00000411285 103 ntBASIC2.1□□□□□ -2.07
KRT4P19013 RNU7-123P-201ENST00000515911 60 ntBASIC2.1□□□□□ -2.07
KRT4P19013 SCARNA16.3-201ENST00000516595 184 ntBASIC2.1□□□□□ -2.07
KRT4P19013 AC141557.1-201ENST00000540982 400 ntBASIC2.1□□□□□ -2.07
KRT4P19013 Y_RNA.93-201ENST00000363066 109 ntBASIC2.09□□□□□ -2.07
KRT4P19013 Y_RNA.265-201ENST00000364677 108 ntBASIC2.09□□□□□ -2.07
KRT4P19013 MIR29C-201ENST00000385231 88 ntBASIC2.09□□□□□ -2.07
KRT4P19013 RNA5SP450-201ENST00000411206 102 ntBASIC2.09□□□□□ -2.07
KRT4P19013 EIF4BP1-201ENST00000554881 351 ntBASIC2.09□□□□□ -2.07
KRT4P19013 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.09□□□□□ -2.08
KRT4P19013 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.09□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 173.3 ms