Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 SNORA63C-201ENST00000364578 129 ntBASIC0.23□□□□□ -2.37
CD28P10747 SNORD115-15-201ENST00000364809 81 ntBASIC0.23□□□□□ -2.37
CD28P10747 SNORD115-1-201ENST00000364961 82 ntBASIC0.23□□□□□ -2.37
CD28P10747 SNORD115-26-201ENST00000365067 82 ntBASIC0.23□□□□□ -2.37
CD28P10747 SNORD115-10-201ENST00000365073 81 ntBASIC0.23□□□□□ -2.37
CD28P10747 SNORD115-43-201ENST00000365503 82 ntBASIC0.23□□□□□ -2.37
CD28P10747 SNORD115-36-201ENST00000365629 82 ntBASIC0.23□□□□□ -2.37
CD28P10747 Y_RNA.384-201ENST00000383909 102 ntBASIC0.23□□□□□ -2.37
CD28P10747 Y_RNA.439-201ENST00000384119 94 ntBASIC0.23□□□□□ -2.37
CD28P10747 Y_RNA.526-201ENST00000384572 110 ntBASIC0.23□□□□□ -2.37
CD28P10747 Y_RNA.547-201ENST00000384654 119 ntBASIC0.23□□□□□ -2.37
CD28P10747 MIR520F-201ENST00000384824 87 ntBASIC0.23□□□□□ -2.37
CD28P10747 MIR520H-201ENST00000385126 88 ntBASIC0.23□□□□□ -2.37
CD28P10747 RNU6-205P-201ENST00000390858 107 ntBASIC0.23□□□□□ -2.37
CD28P10747 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.23□□□□□ -2.37
CD28P10747 RNU4-30P-201ENST00000410245 143 ntBASIC0.23□□□□□ -2.37
CD28P10747 AC090844.1-201ENST00000422019 156 ntBASIC0.23□□□□□ -2.37
CD28P10747 RNU7-56P-201ENST00000458744 62 ntBASIC0.23□□□□□ -2.37
CD28P10747 SNORD19B-201ENST00000459623 84 ntBASIC0.23□□□□□ -2.37
CD28P10747 AC108740.1-201ENST00000498629 225 ntBASIC0.23□□□□□ -2.37
CD28P10747 RNU6-475P-201ENST00000516073 104 ntBASIC0.23□□□□□ -2.37
CD28P10747 SNORA62.5-201ENST00000516634 120 ntBASIC0.23□□□□□ -2.37
CD28P10747 MIR3612-201ENST00000579753 87 ntBASIC0.23□□□□□ -2.37
CD28P10747 RPS29P30-201ENST00000600975 111 ntBASIC0.23□□□□□ -2.37
CD28P10747 AC092447.9-201ENST00000603395 144 ntBASIC0.23□□□□□ -2.37
CD28P10747 SNORD115-40-201ENST00000606510 82 ntBASIC0.23□□□□□ -2.37
CD28P10747 AC104985.2-201ENST00000620598 500 ntBASIC0.23□□□□□ -2.37
CD28P10747 MIR1302-1-201ENST00000637932 143 ntBASIC0.23□□□□□ -2.37
CD28P10747 RNU4-80P-201ENST00000363200 141 ntBASIC0.22□□□□□ -2.37
CD28P10747 Y_RNA.136-201ENST00000363444 102 ntBASIC0.22□□□□□ -2.37
CD28P10747 RNU6-1327P-201ENST00000365302 105 ntBASIC0.22□□□□□ -2.37
CD28P10747 RNU6-1138P-201ENST00000365359 106 ntBASIC0.22□□□□□ -2.37
CD28P10747 RNY3-201ENST00000365484 102 ntBASIC0.22□□□□□ -2.37
CD28P10747 Y_RNA.374-201ENST00000365606 101 ntBASIC0.22□□□□□ -2.37
CD28P10747 RNU6-144P-201ENST00000383951 107 ntBASIC0.22□□□□□ -2.37
CD28P10747 RNU6-21P-201ENST00000384710 107 ntBASIC0.22□□□□□ -2.37
CD28P10747 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.22□□□□□ -2.37
CD28P10747 RNU6-130P-201ENST00000411112 103 ntBASIC0.22□□□□□ -2.37
CD28P10747 SNORD83.1-201ENST00000411362 77 ntBASIC0.22□□□□□ -2.37
CD28P10747 AC002350.1-201ENST00000490759 375 ntBASIC0.22□□□□□ -2.37
CD28P10747 SEPT14P8-201ENST00000508026 178 ntBASIC0.22□□□□□ -2.37
CD28P10747 RNU6-976P-201ENST00000516086 111 ntBASIC0.22□□□□□ -2.37
CD28P10747 RNU6-191P-201ENST00000516295 94 ntBASIC0.22□□□□□ -2.37
CD28P10747 RNU6-977P-201ENST00000516411 103 ntBASIC0.22□□□□□ -2.37
CD28P10747 RNU7-25P-201ENST00000516544 62 ntBASIC0.22□□□□□ -2.37
CD28P10747 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC0.22□□□□□ -2.37
CD28P10747 MIR4676-201ENST00000583078 72 ntBASIC0.22□□□□□ -2.37
CD28P10747 UBE2V2P2-201ENST00000587677 504 ntBASIC0.22□□□□□ -2.37
CD28P10747 AL355297.3-201ENST00000604082 446 ntBASIC0.22□□□□□ -2.37
CD28P10747 AC020891.4-201ENST00000605745 93 ntBASIC0.22□□□□□ -2.37
CD28P10747 SNORD113-5-201ENST00000607261 78 ntBASIC0.22□□□□□ -2.37
CD28P10747 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC0.22□□□□□ -2.37
CD28P10747 RNU6-899P-201ENST00000363947 107 ntBASIC0.21□□□□□ -2.38
CD28P10747 Y_RNA.286-201ENST00000364813 102 ntBASIC0.21□□□□□ -2.38
CD28P10747 RNU6-1283P-201ENST00000365314 105 ntBASIC0.21□□□□□ -2.38
CD28P10747 Y_RNA.390-201ENST00000383932 102 ntBASIC0.21□□□□□ -2.38
CD28P10747 Y_RNA.418-201ENST00000384029 102 ntBASIC0.21□□□□□ -2.38
CD28P10747 MTND1P14-201ENST00000427400 950 ntBASIC0.21□□□□□ -2.38
CD28P10747 POLR2KP2-201ENST00000438155 177 ntBASIC0.21□□□□□ -2.38
CD28P10747 RNU7-73P-201ENST00000458743 63 ntBASIC0.21□□□□□ -2.38
CD28P10747 Y_RNA.632-201ENST00000459189 102 ntBASIC0.21□□□□□ -2.38
CD28P10747 RNU6-1170P-201ENST00000515974 106 ntBASIC0.21□□□□□ -2.38
CD28P10747 RNA5SP134-201ENST00000516492 96 ntBASIC0.21□□□□□ -2.38
CD28P10747 MIR4771-2-201ENST00000577758 74 ntBASIC0.21□□□□□ -2.38
CD28P10747 MIR4771-1-201ENST00000582617 74 ntBASIC0.21□□□□□ -2.38
CD28P10747 AP000942.4-201ENST00000604811 241 ntBASIC0.21□□□□□ -2.38
CD28P10747 MIR8055-201ENST00000610739 97 ntBASIC0.21□□□□□ -2.38
CD28P10747 PART1_1.1-201ENST00000611761 217 ntBASIC0.21□□□□□ -2.38
CD28P10747 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.21□□□□□ -2.38
CD28P10747 Y_RNA.85-201ENST00000363014 111 ntBASIC0.2□□□□□ -2.38
CD28P10747 Y_RNA.143-201ENST00000363520 106 ntBASIC0.2□□□□□ -2.38
CD28P10747 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.2□□□□□ -2.38
CD28P10747 Y_RNA.494-201ENST00000384432 111 ntBASIC0.2□□□□□ -2.38
CD28P10747 Y_RNA.587-201ENST00000391210 103 ntBASIC0.2□□□□□ -2.38
CD28P10747 SNORD100-201ENST00000408573 76 ntBASIC0.2□□□□□ -2.38
CD28P10747 MIR548O-201ENST00000408583 114 ntBASIC0.2□□□□□ -2.38
CD28P10747 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC0.2□□□□□ -2.38
CD28P10747 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.2□□□□□ -2.38
CD28P10747 AC087499.4-201ENST00000448505 178 ntBASIC0.2□□□□□ -2.38
CD28P10747 MIR18B-201ENST00000454574 71 ntBASIC0.2□□□□□ -2.38
CD28P10747 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.2□□□□□ -2.38
CD28P10747 RNU7-62P-201ENST00000458856 62 ntBASIC0.2□□□□□ -2.38
CD28P10747 AC007751.1-201ENST00000529260 376 ntBASIC0.2□□□□□ -2.38
CD28P10747 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC0.2□□□□□ -2.38
CD28P10747 AC124312.5-201ENST00000604451 268 ntBASIC0.2□□□□□ -2.38
CD28P10747 uc_338.6-201ENST00000613544 171 ntBASIC0.2□□□□□ -2.38
CD28P10747 Z97988.1-201ENST00000637697 135 ntBASIC0.2□□□□□ -2.38
CD28P10747 RNU4-67P-201ENST00000364569 141 ntBASIC0.19□□□□□ -2.38
CD28P10747 RNU6-308P-201ENST00000390957 107 ntBASIC0.19□□□□□ -2.38
CD28P10747 RNA5SP496-201ENST00000391240 109 ntBASIC0.19□□□□□ -2.38
CD28P10747 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.19□□□□□ -2.38
CD28P10747 AC107297.1-201ENST00000459991 176 ntBASIC0.19□□□□□ -2.38
CD28P10747 SNORA18.4-201ENST00000516440 124 ntBASIC0.19□□□□□ -2.38
CD28P10747 AC023932.2-201ENST00000603176 175 ntBASIC0.19□□□□□ -2.38
CD28P10747 C8orf59P2-201ENST00000603441 271 ntBASIC0.19□□□□□ -2.38
CD28P10747 MIR6740-201ENST00000618268 113 ntBASIC0.19□□□□□ -2.38
CD28P10747 AC134878.1-201ENST00000619901 243 ntBASIC0.19□□□□□ -2.38
CD28P10747 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.19□□□□□ -2.38
CD28P10747 Y_RNA.471-201ENST00000384312 102 ntBASIC0.18□□□□□ -2.38
CD28P10747 MIR563-201ENST00000385080 79 ntBASIC0.18□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms