Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 RNU6-1170P-201ENST00000515974 106 ntBASIC0.41□□□□□ -2.34
CD74P04233 RNU4-57P-201ENST00000515980 135 ntBASIC0.41□□□□□ -2.34
CD74P04233 RNU6-764P-201ENST00000516396 105 ntBASIC0.41□□□□□ -2.34
CD74P04233 RNU7-25P-201ENST00000516544 62 ntBASIC0.41□□□□□ -2.34
CD74P04233 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
CD74P04233 AC104695.3-201ENST00000604052 296 ntBASIC0.41□□□□□ -2.34
CD74P04233 AC006441.5-201ENST00000612680 209 ntBASIC0.41□□□□□ -2.34
CD74P04233 AC243994.1-201ENST00000618627 109 ntBASIC0.41□□□□□ -2.34
CD74P04233 uc_338.22-201ENST00000622722 187 ntBASIC0.41□□□□□ -2.34
CD74P04233 Y_RNA.168-201ENST00000363740 102 ntBASIC0.4□□□□□ -2.35
CD74P04233 SNORD18A-201ENST00000363753 72 ntBASIC0.4□□□□□ -2.35
CD74P04233 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.4□□□□□ -2.35
CD74P04233 Y_RNA.569-201ENST00000384749 103 ntBASIC0.4□□□□□ -2.35
CD74P04233 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.4□□□□□ -2.35
CD74P04233 AC023449.1-201ENST00000454464 154 ntBASIC0.4□□□□□ -2.35
CD74P04233 HSPE1P25-201ENST00000455484 251 ntBASIC0.4□□□□□ -2.35
CD74P04233 SCARNA8-201ENST00000515924 131 ntBASIC0.4□□□□□ -2.35
CD74P04233 RNU6-475P-201ENST00000516073 104 ntBASIC0.4□□□□□ -2.35
CD74P04233 AL049861.1-201ENST00000603130 150 ntBASIC0.4□□□□□ -2.35
CD74P04233 Y_RNA.31-201ENST00000362574 102 ntBASIC0.39□□□□□ -2.35
CD74P04233 Y_RNA.222-201ENST00000364264 102 ntBASIC0.39□□□□□ -2.35
CD74P04233 RNY1P8-201ENST00000383970 114 ntBASIC0.39□□□□□ -2.35
CD74P04233 RNY1P4-201ENST00000384595 115 ntBASIC0.39□□□□□ -2.35
CD74P04233 Y_RNA.547-201ENST00000384654 119 ntBASIC0.39□□□□□ -2.35
CD74P04233 MIR548O-201ENST00000408583 114 ntBASIC0.39□□□□□ -2.35
CD74P04233 RNA5SP193-201ENST00000410353 107 ntBASIC0.39□□□□□ -2.35
CD74P04233 RNU6-847P-201ENST00000411115 108 ntBASIC0.39□□□□□ -2.35
CD74P04233 SNORD83.1-201ENST00000411362 77 ntBASIC0.39□□□□□ -2.35
CD74P04233 MTND4P19-201ENST00000446659 478 ntBASIC0.39□□□□□ -2.35
CD74P04233 RNU6-496P-201ENST00000516145 99 ntBASIC0.39□□□□□ -2.35
CD74P04233 RNU6-897P-201ENST00000517135 105 ntBASIC0.39□□□□□ -2.35
CD74P04233 AP000753.3-201ENST00000604083 169 ntBASIC0.39□□□□□ -2.35
CD74P04233 Y_RNA.14-201ENST00000362415 103 ntBASIC0.38□□□□□ -2.35
CD74P04233 SNORD114-23-201ENST00000363536 72 ntBASIC0.38□□□□□ -2.35
CD74P04233 SNORD45.3-201ENST00000363836 72 ntBASIC0.38□□□□□ -2.35
CD74P04233 RNA5SP499-201ENST00000363982 119 ntBASIC0.38□□□□□ -2.35
CD74P04233 RNU6-945P-201ENST00000383947 107 ntBASIC0.38□□□□□ -2.35
CD74P04233 Y_RNA.445-201ENST00000384168 102 ntBASIC0.38□□□□□ -2.35
CD74P04233 Y_RNA.494-201ENST00000384432 111 ntBASIC0.38□□□□□ -2.35
CD74P04233 MIR520F-201ENST00000384824 87 ntBASIC0.38□□□□□ -2.35
CD74P04233 Y_RNA.645-201ENST00000391229 102 ntBASIC0.38□□□□□ -2.35
CD74P04233 MTCO1P5-201ENST00000433573 344 ntBASIC0.38□□□□□ -2.35
CD74P04233 RNU7-67P-201ENST00000459003 62 ntBASIC0.38□□□□□ -2.35
CD74P04233 AC107297.1-201ENST00000459991 176 ntBASIC0.38□□□□□ -2.35
CD74P04233 Y_RNA.666-201ENST00000516187 112 ntBASIC0.38□□□□□ -2.35
CD74P04233 RNU7-149P-201ENST00000516739 59 ntBASIC0.38□□□□□ -2.35
CD74P04233 Y_RNA.715-201ENST00000517082 110 ntBASIC0.38□□□□□ -2.35
CD74P04233 RAC1P9-201ENST00000604990 392 ntBASIC0.38□□□□□ -2.35
CD74P04233 AC090574.1-201ENST00000623186 233 ntBASIC0.38□□□□□ -2.35
CD74P04233 AC022140.2-201ENST00000623500 188 ntBASIC0.38□□□□□ -2.35
CD74P04233 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.37□□□□□ -2.35
CD74P04233 RNU4-90P-201ENST00000362773 141 ntBASIC0.37□□□□□ -2.35
CD74P04233 Y_RNA.183-201ENST00000363882 113 ntBASIC0.37□□□□□ -2.35
CD74P04233 Y_RNA.241-201ENST00000364470 117 ntBASIC0.37□□□□□ -2.35
CD74P04233 Y_RNA.242-201ENST00000364473 110 ntBASIC0.37□□□□□ -2.35
CD74P04233 Y_RNA.293-201ENST00000364908 93 ntBASIC0.37□□□□□ -2.35
CD74P04233 RNU6-934P-201ENST00000365154 107 ntBASIC0.37□□□□□ -2.35
CD74P04233 Y_RNA.389-201ENST00000383924 113 ntBASIC0.37□□□□□ -2.35
CD74P04233 SNORA50A-201ENST00000384225 134 ntBASIC0.37□□□□□ -2.35
CD74P04233 RNU6-125P-201ENST00000384505 107 ntBASIC0.37□□□□□ -2.35
CD74P04233 MT-TD-201ENST00000387419 68 ntBASIC0.37□□□□□ -2.35
CD74P04233 SNORD115-46-201ENST00000390982 71 ntBASIC0.37□□□□□ -2.35
CD74P04233 RNU6-823P-201ENST00000391042 103 ntBASIC0.37□□□□□ -2.35
CD74P04233 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.37□□□□□ -2.35
CD74P04233 AC090844.1-201ENST00000422019 156 ntBASIC0.37□□□□□ -2.35
CD74P04233 Y_RNA.639-201ENST00000458981 102 ntBASIC0.37□□□□□ -2.35
CD74P04233 Y_RNA.637-201ENST00000459424 114 ntBASIC0.37□□□□□ -2.35
CD74P04233 RNU6-977P-201ENST00000516411 103 ntBASIC0.37□□□□□ -2.35
CD74P04233 RNU6-958P-201ENST00000516995 106 ntBASIC0.37□□□□□ -2.35
CD74P04233 MIR4771-2-201ENST00000577758 74 ntBASIC0.37□□□□□ -2.35
CD74P04233 MIR4771-1-201ENST00000582617 74 ntBASIC0.37□□□□□ -2.35
CD74P04233 C8orf59P2-201ENST00000603441 271 ntBASIC0.37□□□□□ -2.35
CD74P04233 AC134878.1-201ENST00000619901 243 ntBASIC0.37□□□□□ -2.35
CD74P04233 AC090971.5-201ENST00000621102 293 ntBASIC0.37□□□□□ -2.35
CD74P04233 AC243829.3-201ENST00000622177 108 ntBASIC0.37□□□□□ -2.35
CD74P04233 MIR5087-201ENST00000635826 76 ntBASIC0.37□□□□□ -2.35
CD74P04233 AC010487.4-201ENST00000637027 61 ntBASIC0.37□□□□□ -2.35
CD74P04233 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.37□□□□□ -2.35
CD74P04233 MIR367-201ENST00000362299 68 ntBASIC0.36□□□□□ -2.35
CD74P04233 RNU6-369P-201ENST00000362515 102 ntBASIC0.36□□□□□ -2.35
CD74P04233 Y_RNA.105-201ENST00000363182 111 ntBASIC0.36□□□□□ -2.35
CD74P04233 Y_RNA.205-201ENST00000364128 113 ntBASIC0.36□□□□□ -2.35
CD74P04233 Y_RNA.376-201ENST00000365638 108 ntBASIC0.36□□□□□ -2.35
CD74P04233 RNU6-144P-201ENST00000383951 107 ntBASIC0.36□□□□□ -2.35
CD74P04233 MIR193B-201ENST00000384907 83 ntBASIC0.36□□□□□ -2.35
CD74P04233 MIR520H-201ENST00000385126 88 ntBASIC0.36□□□□□ -2.35
CD74P04233 RNU6-101P-201ENST00000410323 104 ntBASIC0.36□□□□□ -2.35
CD74P04233 BTF3P11-201ENST00000426582 477 ntBASIC0.36□□□□□ -2.35
CD74P04233 RNU2-13P-201ENST00000515909 113 ntBASIC0.36□□□□□ -2.35
CD74P04233 AC013791.1-201ENST00000616619 62 ntBASIC0.36□□□□□ -2.35
CD74P04233 uc_338.4-201ENST00000616635 176 ntBASIC0.36□□□□□ -2.35
CD74P04233 Y_RNA.136-201ENST00000363444 102 ntBASIC0.35□□□□□ -2.35
CD74P04233 SNORA63.7-201ENST00000365579 123 ntBASIC0.35□□□□□ -2.35
CD74P04233 Y_RNA.394-201ENST00000383942 103 ntBASIC0.35□□□□□ -2.35
CD74P04233 Y_RNA.395-201ENST00000383945 109 ntBASIC0.35□□□□□ -2.35
CD74P04233 RNU6-662P-201ENST00000384253 104 ntBASIC0.35□□□□□ -2.35
CD74P04233 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.35□□□□□ -2.35
CD74P04233 MIR5692C2-201ENST00000577959 77 ntBASIC0.35□□□□□ -2.35
CD74P04233 MIR4724-201ENST00000579485 89 ntBASIC0.35□□□□□ -2.35
CD74P04233 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.34□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 131.9 ms