Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 RNU6-756P-201ENST00000383997 107 ntBASIC2.69□□□□□ -1.98
PDGFAP04085 RNU1-52P-201ENST00000384190 164 ntBASIC2.69□□□□□ -1.98
PDGFAP04085 RNU6-1113P-201ENST00000384348 107 ntBASIC2.69□□□□□ -1.98
PDGFAP04085 MIR548D2-201ENST00000384955 97 ntBASIC2.69□□□□□ -1.98
PDGFAP04085 RNA5SP144-201ENST00000410846 116 ntBASIC2.69□□□□□ -1.98
PDGFAP04085 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.69□□□□□ -1.98
PDGFAP04085 RN7SL20P-201ENST00000488827 297 ntBASIC2.69□□□□□ -1.98
PDGFAP04085 RNU7-53P-201ENST00000516705 60 ntBASIC2.69□□□□□ -1.98
PDGFAP04085 RNU6-537P-201ENST00000517277 103 ntBASIC2.69□□□□□ -1.98
PDGFAP04085 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.69□□□□□ -1.98
PDGFAP04085 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
PDGFAP04085 SNORA51.5-201ENST00000384126 131 ntBASIC2.68□□□□□ -1.98
PDGFAP04085 RNU6-1104P-201ENST00000384723 104 ntBASIC2.68□□□□□ -1.98
PDGFAP04085 MT-TI-201ENST00000387365 69 ntBASIC2.68□□□□□ -1.98
PDGFAP04085 RNA5SP450-201ENST00000411206 102 ntBASIC2.68□□□□□ -1.98
PDGFAP04085 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.68□□□□□ -1.98
PDGFAP04085 RNU6-893P-201ENST00000458841 100 ntBASIC2.68□□□□□ -1.98
PDGFAP04085 SNORD109B-201ENST00000458961 67 ntBASIC2.68□□□□□ -1.98
PDGFAP04085 SNORD109A-201ENST00000459128 67 ntBASIC2.68□□□□□ -1.98
PDGFAP04085 AC099513.1-201ENST00000490423 301 ntBASIC2.68□□□□□ -1.98
PDGFAP04085 Y_RNA.677-201ENST00000516401 85 ntBASIC2.68□□□□□ -1.98
PDGFAP04085 SNORA31.25-201ENST00000517242 134 ntBASIC2.68□□□□□ -1.98
PDGFAP04085 IGHVII-40-1-201ENST00000517316 58 ntBASIC2.68□□□□□ -1.98
PDGFAP04085 AC022523.2-201ENST00000561045 150 ntBASIC2.68□□□□□ -1.98
PDGFAP04085 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
PDGFAP04085 MIR424-201ENST00000362227 98 ntBASIC2.67□□□□□ -1.98
PDGFAP04085 RNU6-1255P-201ENST00000363434 112 ntBASIC2.67□□□□□ -1.98
PDGFAP04085 SNORA3A-201ENST00000364113 130 ntBASIC2.67□□□□□ -1.98
PDGFAP04085 RNA5SP100-201ENST00000410903 110 ntBASIC2.67□□□□□ -1.98
PDGFAP04085 RNA5SP59-201ENST00000410922 110 ntBASIC2.67□□□□□ -1.98
PDGFAP04085 RNU7-67P-201ENST00000459003 62 ntBASIC2.67□□□□□ -1.98
PDGFAP04085 RNA5SP281-201ENST00000516504 135 ntBASIC2.67□□□□□ -1.98
PDGFAP04085 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.67□□□□□ -1.98
PDGFAP04085 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.67□□□□□ -1.98
PDGFAP04085 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.67□□□□□ -1.98
PDGFAP04085 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.67□□□□□ -1.98
PDGFAP04085 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
PDGFAP04085 Y_RNA.328-201ENST00000365208 113 ntBASIC2.66□□□□□ -1.98
PDGFAP04085 RNU6-851P-201ENST00000384565 107 ntBASIC2.66□□□□□ -1.98
PDGFAP04085 RPS29P29-201ENST00000456396 171 ntBASIC2.66□□□□□ -1.98
PDGFAP04085 AC068339.1-201ENST00000526965 141 ntBASIC2.66□□□□□ -1.98
PDGFAP04085 MIR3152-201ENST00000579801 74 ntBASIC2.66□□□□□ -1.98
PDGFAP04085 MIR4435-1-201ENST00000582552 80 ntBASIC2.66□□□□□ -1.98
PDGFAP04085 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.66□□□□□ -1.98
PDGFAP04085 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.66□□□□□ -1.98
PDGFAP04085 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.65□□□□□ -1.98
PDGFAP04085 U8.6-201ENST00000364939 135 ntBASIC2.65□□□□□ -1.99
PDGFAP04085 RNU6-1067P-201ENST00000384752 107 ntBASIC2.65□□□□□ -1.99
PDGFAP04085 RNA5SP261-201ENST00000410536 106 ntBASIC2.65□□□□□ -1.99
PDGFAP04085 SNORD123-201ENST00000459473 70 ntBASIC2.65□□□□□ -1.99
PDGFAP04085 RNU7-193P-201ENST00000516723 65 ntBASIC2.65□□□□□ -1.99
PDGFAP04085 MIR5009-201ENST00000578736 100 ntBASIC2.65□□□□□ -1.99
PDGFAP04085 MIR3670-2-201ENST00000582974 65 ntBASIC2.65□□□□□ -1.99
PDGFAP04085 MIR3670-1-201ENST00000584160 65 ntBASIC2.65□□□□□ -1.99
PDGFAP04085 MIR3670-3-201ENST00000584855 65 ntBASIC2.65□□□□□ -1.99
PDGFAP04085 MIR3670-4-201ENST00000612260 65 ntBASIC2.65□□□□□ -1.99
PDGFAP04085 AC092881.1-201ENST00000638218 2733 ntBASIC2.65□□□□□ -1.99
PDGFAP04085 AP000648.3-201ENST00000623539 4507 ntBASIC2.64□□□□□ -1.99
PDGFAP04085 Y_RNA.344-201ENST00000365381 112 ntBASIC2.64□□□□□ -1.99
PDGFAP04085 MIR196B-201ENST00000384852 84 ntBASIC2.64□□□□□ -1.99
PDGFAP04085 MIR526A1-201ENST00000384897 85 ntBASIC2.64□□□□□ -1.99
PDGFAP04085 RNU6-1319P-201ENST00000390855 104 ntBASIC2.64□□□□□ -1.99
PDGFAP04085 RNU6-747P-201ENST00000390928 104 ntBASIC2.64□□□□□ -1.99
PDGFAP04085 RNU6-360P-201ENST00000390944 104 ntBASIC2.64□□□□□ -1.99
PDGFAP04085 RNU6-241P-201ENST00000391148 104 ntBASIC2.64□□□□□ -1.99
PDGFAP04085 RNU6-177P-201ENST00000411257 104 ntBASIC2.64□□□□□ -1.99
PDGFAP04085 RN7SKP192-201ENST00000411291 327 ntBASIC2.64□□□□□ -1.99
PDGFAP04085 SNORA31.4-201ENST00000516049 129 ntBASIC2.64□□□□□ -1.99
PDGFAP04085 RNU7-6P-201ENST00000516845 62 ntBASIC2.64□□□□□ -1.99
PDGFAP04085 RNU6-958P-201ENST00000516995 106 ntBASIC2.64□□□□□ -1.99
PDGFAP04085 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.64□□□□□ -1.99
PDGFAP04085 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.64□□□□□ -1.99
PDGFAP04085 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.64□□□□□ -1.99
PDGFAP04085 SNORA9.2-201ENST00000365361 133 ntBASIC2.63□□□□□ -1.99
PDGFAP04085 Y_RNA.531-201ENST00000384589 121 ntBASIC2.63□□□□□ -1.99
PDGFAP04085 SNORA31.17-201ENST00000516953 127 ntBASIC2.63□□□□□ -1.99
PDGFAP04085 AC004812.1-201ENST00000540773 146 ntBASIC2.63□□□□□ -1.99
PDGFAP04085 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
PDGFAP04085 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
PDGFAP04085 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.62□□□□□ -1.99
PDGFAP04085 RNU1-112P-201ENST00000364401 164 ntBASIC2.62□□□□□ -1.99
PDGFAP04085 Y_RNA.299-201ENST00000364973 94 ntBASIC2.62□□□□□ -1.99
PDGFAP04085 RNU1-138P-201ENST00000384093 164 ntBASIC2.62□□□□□ -1.99
PDGFAP04085 SNORA24-201ENST00000384096 131 ntBASIC2.62□□□□□ -1.99
PDGFAP04085 RNA5SP508-201ENST00000411327 119 ntBASIC2.62□□□□□ -1.99
PDGFAP04085 POLR2J4-204ENST00000418424 324 ntBASIC2.62□□□□□ -1.99
PDGFAP04085 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.62□□□□□ -1.99
PDGFAP04085 RPS23P4-201ENST00000487908 423 ntBASIC2.62□□□□□ -1.99
PDGFAP04085 RNU2-13P-201ENST00000515909 113 ntBASIC2.62□□□□□ -1.99
PDGFAP04085 DNAJC19P9-201ENST00000555084 351 ntBASIC2.62□□□□□ -1.99
PDGFAP04085 MIR548AR-201ENST00000582191 57 ntBASIC2.62□□□□□ -1.99
PDGFAP04085 FAM106DP-201ENST00000586416 501 ntBASIC2.62□□□□□ -1.99
PDGFAP04085 AC243994.1-201ENST00000618627 109 ntBASIC2.62□□□□□ -1.99
PDGFAP04085 RNU6-1123P-201ENST00000362347 106 ntBASIC2.61□□□□□ -1.99
PDGFAP04085 MIR1912-201ENST00000410389 80 ntBASIC2.61□□□□□ -1.99
PDGFAP04085 AL512326.2-201ENST00000426359 151 ntBASIC2.61□□□□□ -1.99
PDGFAP04085 RPS29P6-201ENST00000438196 145 ntBASIC2.61□□□□□ -1.99
PDGFAP04085 RNU7-45P-201ENST00000459460 63 ntBASIC2.61□□□□□ -1.99
PDGFAP04085 AC107016.2-201ENST00000547968 190 ntBASIC2.61□□□□□ -1.99
PDGFAP04085 AC006254.2-201ENST00000603259 279 ntBASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms