Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 SNORD115-16-201ENST00000363887 82 ntBASIC0.27□□□□□ -2.37
MT-ND3P03897 Y_RNA.187-201ENST00000363918 113 ntBASIC0.27□□□□□ -2.37
MT-ND3P03897 SNORD115-6-201ENST00000363942 82 ntBASIC0.27□□□□□ -2.37
MT-ND3P03897 RNU6-899P-201ENST00000363947 107 ntBASIC0.27□□□□□ -2.37
MT-ND3P03897 SNORD115-42-201ENST00000364273 82 ntBASIC0.27□□□□□ -2.37
MT-ND3P03897 SNORD115-15-201ENST00000364809 81 ntBASIC0.27□□□□□ -2.37
MT-ND3P03897 SNORD115-1-201ENST00000364961 82 ntBASIC0.27□□□□□ -2.37
MT-ND3P03897 SNORD115-26-201ENST00000365067 82 ntBASIC0.27□□□□□ -2.37
MT-ND3P03897 SNORD115-10-201ENST00000365073 81 ntBASIC0.27□□□□□ -2.37
MT-ND3P03897 RNU1-115P-201ENST00000365329 160 ntBASIC0.27□□□□□ -2.37
MT-ND3P03897 SNORD115-43-201ENST00000365503 82 ntBASIC0.27□□□□□ -2.37
MT-ND3P03897 SNORD115-36-201ENST00000365629 82 ntBASIC0.27□□□□□ -2.37
MT-ND3P03897 RNA5SP127-201ENST00000411051 133 ntBASIC0.27□□□□□ -2.37
MT-ND3P03897 SNORD71-201ENST00000411292 86 ntBASIC0.27□□□□□ -2.37
MT-ND3P03897 AL160004.2-201ENST00000432935 350 ntBASIC0.27□□□□□ -2.37
MT-ND3P03897 MIR18B-201ENST00000454574 71 ntBASIC0.27□□□□□ -2.37
MT-ND3P03897 AC023932.2-201ENST00000603176 175 ntBASIC0.27□□□□□ -2.37
MT-ND3P03897 SNORD115-40-201ENST00000606510 82 ntBASIC0.27□□□□□ -2.37
MT-ND3P03897 SNORD113-5-201ENST00000607261 78 ntBASIC0.27□□□□□ -2.37
MT-ND3P03897 uc_338.16-201ENST00000621804 95 ntBASIC0.27□□□□□ -2.37
MT-ND3P03897 AC139792.2-201ENST00000624218 587 ntBASIC0.27□□□□□ -2.37
MT-ND3P03897 SNORD116-29-201ENST00000384516 83 ntBASIC0.26□□□□□ -2.37
MT-ND3P03897 Y_RNA.547-201ENST00000384654 119 ntBASIC0.26□□□□□ -2.37
MT-ND3P03897 SNORD38B-201ENST00000384690 67 ntBASIC0.26□□□□□ -2.37
MT-ND3P03897 RNU4-30P-201ENST00000410245 143 ntBASIC0.26□□□□□ -2.37
MT-ND3P03897 RNU2-70P-201ENST00000410718 179 ntBASIC0.26□□□□□ -2.37
MT-ND3P03897 AC092447.9-201ENST00000603395 144 ntBASIC0.26□□□□□ -2.37
MT-ND3P03897 AL109933.3-201ENST00000619095 188 ntBASIC0.26□□□□□ -2.37
MT-ND3P03897 SNORD38B-202ENST00000625943 69 ntBASIC0.26□□□□□ -2.37
MT-ND3P03897 MIR103A1-201ENST00000362165 78 ntBASIC0.25□□□□□ -2.37
MT-ND3P03897 RNU6-801P-201ENST00000364087 105 ntBASIC0.25□□□□□ -2.37
MT-ND3P03897 RNU6-937P-201ENST00000384325 106 ntBASIC0.25□□□□□ -2.37
MT-ND3P03897 MIR548O-201ENST00000408583 114 ntBASIC0.25□□□□□ -2.37
MT-ND3P03897 MIR1197-201ENST00000408818 88 ntBASIC0.25□□□□□ -2.37
MT-ND3P03897 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.25□□□□□ -2.37
MT-ND3P03897 AC236972.2-201ENST00000434979 310 ntBASIC0.25□□□□□ -2.37
MT-ND3P03897 AC087499.4-201ENST00000448505 178 ntBASIC0.25□□□□□ -2.37
MT-ND3P03897 SNORA25.12-201ENST00000516202 82 ntBASIC0.25□□□□□ -2.37
MT-ND3P03897 SNORA18.4-201ENST00000516440 124 ntBASIC0.25□□□□□ -2.37
MT-ND3P03897 RNU7-25P-201ENST00000516544 62 ntBASIC0.25□□□□□ -2.37
MT-ND3P03897 MIR4514-201ENST00000581410 57 ntBASIC0.25□□□□□ -2.37
MT-ND3P03897 AL606534.2-204ENST00000635008 178 ntBASIC0.25□□□□□ -2.37
MT-ND3P03897 Y_RNA.142-201ENST00000363491 102 ntBASIC0.24□□□□□ -2.37
MT-ND3P03897 RNU6-1048P-201ENST00000364054 107 ntBASIC0.24□□□□□ -2.37
MT-ND3P03897 Y_RNA.241-201ENST00000364470 117 ntBASIC0.24□□□□□ -2.37
MT-ND3P03897 SNORD100-201ENST00000408573 76 ntBASIC0.24□□□□□ -2.37
MT-ND3P03897 SNORA40.8-201ENST00000411034 126 ntBASIC0.24□□□□□ -2.37
MT-ND3P03897 AC108740.1-201ENST00000498629 225 ntBASIC0.24□□□□□ -2.37
MT-ND3P03897 RNU6-1170P-201ENST00000515974 106 ntBASIC0.24□□□□□ -2.37
MT-ND3P03897 AC084781.2-201ENST00000615568 161 ntBASIC0.24□□□□□ -2.37
MT-ND3P03897 AC022140.2-201ENST00000623500 188 ntBASIC0.24□□□□□ -2.37
MT-ND3P03897 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.24□□□□□ -2.37
MT-ND3P03897 RNU4-80P-201ENST00000363200 141 ntBASIC0.23□□□□□ -2.37
MT-ND3P03897 Y_RNA.143-201ENST00000363520 106 ntBASIC0.23□□□□□ -2.37
MT-ND3P03897 MIR518A1-201ENST00000385068 85 ntBASIC0.23□□□□□ -2.37
MT-ND3P03897 RNU6-1319P-201ENST00000390855 104 ntBASIC0.23□□□□□ -2.37
MT-ND3P03897 RNU6-747P-201ENST00000390928 104 ntBASIC0.23□□□□□ -2.37
MT-ND3P03897 RNU6-679P-201ENST00000391003 106 ntBASIC0.23□□□□□ -2.37
MT-ND3P03897 RNU6-241P-201ENST00000391148 104 ntBASIC0.23□□□□□ -2.37
MT-ND3P03897 RNA5SP496-201ENST00000391240 109 ntBASIC0.23□□□□□ -2.37
MT-ND3P03897 RNU6-447P-201ENST00000410293 104 ntBASIC0.23□□□□□ -2.37
MT-ND3P03897 RNU6-1118P-201ENST00000410382 104 ntBASIC0.23□□□□□ -2.37
MT-ND3P03897 RNU6-1076P-201ENST00000410397 104 ntBASIC0.23□□□□□ -2.37
MT-ND3P03897 RNU6-355P-201ENST00000410427 104 ntBASIC0.23□□□□□ -2.37
MT-ND3P03897 RNU6-791P-201ENST00000410467 104 ntBASIC0.23□□□□□ -2.37
MT-ND3P03897 RNU6-705P-201ENST00000410601 104 ntBASIC0.23□□□□□ -2.37
MT-ND3P03897 RNU6-1100P-201ENST00000410691 104 ntBASIC0.23□□□□□ -2.37
MT-ND3P03897 RNU6-860P-201ENST00000410860 104 ntBASIC0.23□□□□□ -2.37
MT-ND3P03897 RNU2-14P-201ENST00000411053 191 ntBASIC0.23□□□□□ -2.37
MT-ND3P03897 RNU6-1217P-201ENST00000411276 104 ntBASIC0.23□□□□□ -2.37
MT-ND3P03897 RNU6-785P-201ENST00000411324 104 ntBASIC0.23□□□□□ -2.37
MT-ND3P03897 RNU7-152P-201ENST00000458982 64 ntBASIC0.23□□□□□ -2.37
MT-ND3P03897 SNORA20.3-201ENST00000516880 132 ntBASIC0.23□□□□□ -2.37
MT-ND3P03897 AC022523.2-201ENST00000561045 150 ntBASIC0.23□□□□□ -2.37
MT-ND3P03897 AC020891.4-201ENST00000605745 93 ntBASIC0.23□□□□□ -2.37
MT-ND3P03897 U6.90-201ENST00000614007 104 ntBASIC0.23□□□□□ -2.37
MT-ND3P03897 U6.70-201ENST00000620287 104 ntBASIC0.23□□□□□ -2.37
MT-ND3P03897 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.22□□□□□ -2.37
MT-ND3P03897 RNU6-349P-201ENST00000362402 107 ntBASIC0.22□□□□□ -2.37
MT-ND3P03897 Y_RNA.252-201ENST00000364556 101 ntBASIC0.22□□□□□ -2.37
MT-ND3P03897 RNU6-364P-201ENST00000384387 107 ntBASIC0.22□□□□□ -2.37
MT-ND3P03897 RNA5SP63-201ENST00000391225 112 ntBASIC0.22□□□□□ -2.37
MT-ND3P03897 AC138393.2-201ENST00000414742 246 ntBASIC0.22□□□□□ -2.37
MT-ND3P03897 RNU7-73P-201ENST00000458743 63 ntBASIC0.22□□□□□ -2.37
MT-ND3P03897 Y_RNA.661-201ENST00000516003 99 ntBASIC0.22□□□□□ -2.37
MT-ND3P03897 RNU6-277P-201ENST00000516272 106 ntBASIC0.22□□□□□ -2.37
MT-ND3P03897 RNU4-77P-201ENST00000516692 156 ntBASIC0.22□□□□□ -2.37
MT-ND3P03897 MIR5093-201ENST00000583199 100 ntBASIC0.22□□□□□ -2.37
MT-ND3P03897 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.22□□□□□ -2.37
MT-ND3P03897 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC0.22□□□□□ -2.37
MT-ND3P03897 MIR1302-1-201ENST00000637932 143 ntBASIC0.22□□□□□ -2.37
MT-ND3P03897 RNU6-1115P-201ENST00000362490 106 ntBASIC0.21□□□□□ -2.38
MT-ND3P03897 RNU6-1205P-201ENST00000363625 106 ntBASIC0.21□□□□□ -2.38
MT-ND3P03897 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.21□□□□□ -2.38
MT-ND3P03897 RNU7-53P-201ENST00000516705 60 ntBASIC0.21□□□□□ -2.38
MT-ND3P03897 RNU6-958P-201ENST00000516995 106 ntBASIC0.21□□□□□ -2.38
MT-ND3P03897 MIR4662B-201ENST00000579498 81 ntBASIC0.21□□□□□ -2.38
MT-ND3P03897 AC090897.1-201ENST00000580909 226 ntBASIC0.21□□□□□ -2.38
MT-ND3P03897 AP000942.4-201ENST00000604811 241 ntBASIC0.21□□□□□ -2.38
MT-ND3P03897 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.21□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms