Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 RNU4-75P-201ENST00000364621 146 ntBASIC-0.78□□□□□ -2.53
APOEP02649 Y_RNA.536-201ENST00000384621 113 ntBASIC-0.78□□□□□ -2.53
APOEP02649 RNU6-710P-201ENST00000410424 105 ntBASIC-0.78□□□□□ -2.53
APOEP02649 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC-0.78□□□□□ -2.53
APOEP02649 SNORD11-201ENST00000459124 84 ntBASIC-0.78□□□□□ -2.53
APOEP02649 RNU6-864P-201ENST00000516256 108 ntBASIC-0.78□□□□□ -2.53
APOEP02649 RNU7-53P-201ENST00000516705 60 ntBASIC-0.78□□□□□ -2.53
APOEP02649 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.78□□□□□ -2.53
APOEP02649 MIR2681-201ENST00000581814 105 ntBASIC-0.78□□□□□ -2.53
APOEP02649 DLEU2_1.1-201ENST00000612089 120 ntBASIC-0.78□□□□□ -2.53
APOEP02649 SNORA70.25-201ENST00000612741 95 ntBASIC-0.78□□□□□ -2.53
APOEP02649 DLEU2_1.2-201ENST00000614667 120 ntBASIC-0.78□□□□□ -2.53
APOEP02649 MIR3662-201ENST00000637030 95 ntBASIC-0.78□□□□□ -2.53
APOEP02649 RNU6-451P-201ENST00000362921 107 ntBASIC-0.79□□□□□ -2.54
APOEP02649 RNU6-626P-201ENST00000363354 107 ntBASIC-0.79□□□□□ -2.54
APOEP02649 Y_RNA.588-201ENST00000391254 102 ntBASIC-0.79□□□□□ -2.54
APOEP02649 RNU6-284P-201ENST00000411105 106 ntBASIC-0.79□□□□□ -2.54
APOEP02649 AC074085.1-201ENST00000413598 418 ntBASIC-0.79□□□□□ -2.54
APOEP02649 AF228730.4-201ENST00000421457 183 ntBASIC-0.79□□□□□ -2.54
APOEP02649 RPL39P25-201ENST00000449384 154 ntBASIC-0.79□□□□□ -2.54
APOEP02649 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC-0.79□□□□□ -2.54
APOEP02649 AC026782.1-201ENST00000512952 449 ntBASIC-0.79□□□□□ -2.54
APOEP02649 MTND3P12-201ENST00000559068 328 ntBASIC-0.79□□□□□ -2.54
APOEP02649 MTND5P34-201ENST00000568888 325 ntBASIC-0.79□□□□□ -2.54
APOEP02649 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC-0.79□□□□□ -2.54
APOEP02649 MIR548AY-201ENST00000617669 107 ntBASIC-0.79□□□□□ -2.54
APOEP02649 RNU4-50P-201ENST00000364361 141 ntBASIC-0.8□□□□□ -2.54
APOEP02649 Y_RNA.450-201ENST00000384198 113 ntBASIC-0.8□□□□□ -2.54
APOEP02649 Y_RNA.456-201ENST00000384232 111 ntBASIC-0.8□□□□□ -2.54
APOEP02649 RNU6-535P-201ENST00000384722 107 ntBASIC-0.8□□□□□ -2.54
APOEP02649 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-0.8□□□□□ -2.54
APOEP02649 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC-0.8□□□□□ -2.54
APOEP02649 MTND2P22-201ENST00000444325 1033 ntBASIC-0.8□□□□□ -2.54
APOEP02649 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC-0.8□□□□□ -2.54
APOEP02649 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC-0.8□□□□□ -2.54
APOEP02649 RNU6-1007P-201ENST00000516586 107 ntBASIC-0.8□□□□□ -2.54
APOEP02649 RNU6-566P-201ENST00000516790 107 ntBASIC-0.8□□□□□ -2.54
APOEP02649 AP001282.2-201ENST00000616149 309 ntBASIC-0.8□□□□□ -2.54
APOEP02649 AC124864.2-201ENST00000624736 186 ntBASIC-0.8□□□□□ -2.54
APOEP02649 MTND5P26-201ENST00000426018 1752 ntBASIC-0.8□□□□□ -2.54
APOEP02649 Y_RNA.242-201ENST00000364473 110 ntBASIC-0.81□□□□□ -2.54
APOEP02649 RNU6-708P-201ENST00000384217 107 ntBASIC-0.81□□□□□ -2.54
APOEP02649 RNU6-35P-201ENST00000384530 107 ntBASIC-0.81□□□□□ -2.54
APOEP02649 U8.15-201ENST00000390947 134 ntBASIC-0.81□□□□□ -2.54
APOEP02649 RNU4-30P-201ENST00000410245 143 ntBASIC-0.81□□□□□ -2.54
APOEP02649 MTND4LP11-201ENST00000422184 280 ntBASIC-0.81□□□□□ -2.54
APOEP02649 RNU6-437P-201ENST00000459408 95 ntBASIC-0.81□□□□□ -2.54
APOEP02649 RNU6-415P-201ENST00000516252 97 ntBASIC-0.81□□□□□ -2.54
APOEP02649 RNU6-765P-201ENST00000516916 99 ntBASIC-0.81□□□□□ -2.54
APOEP02649 MIR2355-201ENST00000517199 87 ntBASIC-0.81□□□□□ -2.54
APOEP02649 NBR2-204ENST00000587322 63 ntBASIC-0.81□□□□□ -2.54
APOEP02649 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.81□□□□□ -2.54
APOEP02649 AC090617.10-201ENST00000624308 134 ntBASIC-0.81□□□□□ -2.54
APOEP02649 Y_RNA.38-201ENST00000362617 102 ntBASIC-0.82□□□□□ -2.54
APOEP02649 Y_RNA.274-201ENST00000364714 101 ntBASIC-0.82□□□□□ -2.54
APOEP02649 SNORD49B-201ENST00000365172 72 ntBASIC-0.82□□□□□ -2.54
APOEP02649 SNORA40.5-201ENST00000391061 128 ntBASIC-0.82□□□□□ -2.54
APOEP02649 RNU6-938P-201ENST00000411285 103 ntBASIC-0.82□□□□□ -2.54
APOEP02649 FCF1P4-201ENST00000448326 183 ntBASIC-0.82□□□□□ -2.54
APOEP02649 AC007751.1-201ENST00000529260 376 ntBASIC-0.82□□□□□ -2.54
APOEP02649 MIR4491-201ENST00000581087 68 ntBASIC-0.82□□□□□ -2.54
APOEP02649 RNY3P3-201ENST00000363816 102 ntBASIC-0.83□□□□□ -2.54
APOEP02649 Y_RNA.433-201ENST00000384089 102 ntBASIC-0.83□□□□□ -2.54
APOEP02649 SNORA27-201ENST00000384323 126 ntBASIC-0.83□□□□□ -2.54
APOEP02649 SNORA72.6-201ENST00000384520 129 ntBASIC-0.83□□□□□ -2.54
APOEP02649 Y_RNA.539-201ENST00000384635 107 ntBASIC-0.83□□□□□ -2.54
APOEP02649 Y_RNA.553-201ENST00000384670 102 ntBASIC-0.83□□□□□ -2.54
APOEP02649 Y_RNA.594-201ENST00000410373 140 ntBASIC-0.83□□□□□ -2.54
APOEP02649 RPL21P38-201ENST00000418090 167 ntBASIC-0.83□□□□□ -2.54
APOEP02649 RPS29P8-201ENST00000445109 171 ntBASIC-0.83□□□□□ -2.54
APOEP02649 AC098826.2-201ENST00000452011 651 ntBASIC-0.83□□□□□ -2.54
APOEP02649 RPS29P24-201ENST00000486345 171 ntBASIC-0.83□□□□□ -2.54
APOEP02649 AC091951.2-201ENST00000500762 203 ntBASIC-0.83□□□□□ -2.54
APOEP02649 Y_RNA.697-201ENST00000516776 113 ntBASIC-0.83□□□□□ -2.54
APOEP02649 RNU6-897P-201ENST00000517135 105 ntBASIC-0.83□□□□□ -2.54
APOEP02649 MIR5706-201ENST00000579841 80 ntBASIC-0.83□□□□□ -2.54
APOEP02649 MIR4677-201ENST00000584153 80 ntBASIC-0.83□□□□□ -2.54
APOEP02649 AC010205.1-201ENST00000616668 449 ntBASIC-0.83□□□□□ -2.54
APOEP02649 RNU6-831P-201ENST00000384548 107 ntBASIC-0.84□□□□□ -2.54
APOEP02649 DEFB108C-201ENST00000400154 252 ntBASIC-0.84□□□□□ -2.54
APOEP02649 RNA5SP451-201ENST00000410588 110 ntBASIC-0.84□□□□□ -2.54
APOEP02649 MTND4P28-201ENST00000426217 387 ntBASIC-0.84□□□□□ -2.54
APOEP02649 MIR2053-201ENST00000459295 91 ntBASIC-0.84□□□□□ -2.54
APOEP02649 AC019235.1-201ENST00000503847 207 ntBASIC-0.84□□□□□ -2.54
APOEP02649 Y_RNA.666-201ENST00000516187 112 ntBASIC-0.84□□□□□ -2.54
APOEP02649 CR383656.4-201ENST00000546909 122 ntBASIC-0.84□□□□□ -2.54
APOEP02649 AL080274.1-201ENST00000605565 220 ntBASIC-0.84□□□□□ -2.54
APOEP02649 AC022441.3-201ENST00000605737 136 ntBASIC-0.84□□□□□ -2.54
APOEP02649 MIR4788-201ENST00000639104 80 ntBASIC-0.84□□□□□ -2.54
APOEP02649 RNU6-674P-201ENST00000363831 107 ntBASIC-0.85□□□□□ -2.55
APOEP02649 SNORD115-28-201ENST00000363931 81 ntBASIC-0.85□□□□□ -2.55
APOEP02649 SNORD116-9-201ENST00000384000 95 ntBASIC-0.85□□□□□ -2.55
APOEP02649 SNORD116-3-201ENST00000384287 95 ntBASIC-0.85□□□□□ -2.55
APOEP02649 SNORD116-8-201ENST00000384365 95 ntBASIC-0.85□□□□□ -2.55
APOEP02649 SNORD116-7-201ENST00000384404 95 ntBASIC-0.85□□□□□ -2.55
APOEP02649 SNORD116-5-201ENST00000384462 95 ntBASIC-0.85□□□□□ -2.55
APOEP02649 SNORA36B-201ENST00000410438 131 ntBASIC-0.85□□□□□ -2.55
APOEP02649 RNU6-475P-201ENST00000516073 104 ntBASIC-0.85□□□□□ -2.55
APOEP02649 AC006362.1-201ENST00000567392 174 ntBASIC-0.85□□□□□ -2.55
APOEP02649 AC011476.5-201ENST00000615594 130 ntBASIC-0.85□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms