Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 MT-TN-201ENST00000387400 73 ntBASIC0.36□□□□□ -2.35
HLA-DQA1P01909 RNU6-823P-201ENST00000391042 103 ntBASIC0.36□□□□□ -2.35
HLA-DQA1P01909 MIR548O-201ENST00000408583 114 ntBASIC0.36□□□□□ -2.35
HLA-DQA1P01909 RNU6-121P-201ENST00000410525 99 ntBASIC0.36□□□□□ -2.35
HLA-DQA1P01909 RNA5SP247-201ENST00000411181 105 ntBASIC0.36□□□□□ -2.35
HLA-DQA1P01909 Y_RNA.639-201ENST00000458981 102 ntBASIC0.36□□□□□ -2.35
HLA-DQA1P01909 SCARNA8-201ENST00000515924 131 ntBASIC0.36□□□□□ -2.35
HLA-DQA1P01909 RNA5SP220-201ENST00000516298 104 ntBASIC0.36□□□□□ -2.35
HLA-DQA1P01909 Y_RNA.715-201ENST00000517082 110 ntBASIC0.36□□□□□ -2.35
HLA-DQA1P01909 RNU6-1223P-201ENST00000517124 104 ntBASIC0.36□□□□□ -2.35
HLA-DQA1P01909 AC018659.1-201ENST00000551083 169 ntBASIC0.36□□□□□ -2.35
HLA-DQA1P01909 MIR5000-201ENST00000577717 103 ntBASIC0.36□□□□□ -2.35
HLA-DQA1P01909 AL021707.8-201ENST00000609428 183 ntBASIC0.36□□□□□ -2.35
HLA-DQA1P01909 AC013791.1-201ENST00000616619 62 ntBASIC0.36□□□□□ -2.35
HLA-DQA1P01909 AC090971.5-201ENST00000621102 293 ntBASIC0.36□□□□□ -2.35
HLA-DQA1P01909 MIR5087-201ENST00000635826 76 ntBASIC0.36□□□□□ -2.35
HLA-DQA1P01909 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
HLA-DQA1P01909 MIR377-201ENST00000362145 69 ntBASIC0.35□□□□□ -2.35
HLA-DQA1P01909 RNU4-90P-201ENST00000362773 141 ntBASIC0.35□□□□□ -2.35
HLA-DQA1P01909 Y_RNA.242-201ENST00000364473 110 ntBASIC0.35□□□□□ -2.35
HLA-DQA1P01909 Y_RNA.376-201ENST00000365638 108 ntBASIC0.35□□□□□ -2.35
HLA-DQA1P01909 Y_RNA.486-201ENST00000384398 107 ntBASIC0.35□□□□□ -2.35
HLA-DQA1P01909 RNU6-1237P-201ENST00000384777 107 ntBASIC0.35□□□□□ -2.35
HLA-DQA1P01909 MIR520F-201ENST00000384824 87 ntBASIC0.35□□□□□ -2.35
HLA-DQA1P01909 MIR520H-201ENST00000385126 88 ntBASIC0.35□□□□□ -2.35
HLA-DQA1P01909 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.35□□□□□ -2.35
HLA-DQA1P01909 PMCHL1-202ENST00000423102 261 ntBASIC0.35□□□□□ -2.35
HLA-DQA1P01909 RNU7-67P-201ENST00000459003 62 ntBASIC0.35□□□□□ -2.35
HLA-DQA1P01909 AC107297.1-201ENST00000459991 176 ntBASIC0.35□□□□□ -2.35
HLA-DQA1P01909 RNU6-977P-201ENST00000516411 103 ntBASIC0.35□□□□□ -2.35
HLA-DQA1P01909 RNU6-958P-201ENST00000516995 106 ntBASIC0.35□□□□□ -2.35
HLA-DQA1P01909 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.35□□□□□ -2.35
HLA-DQA1P01909 AP000753.3-201ENST00000604083 169 ntBASIC0.35□□□□□ -2.35
HLA-DQA1P01909 uc_338.6-201ENST00000613544 171 ntBASIC0.35□□□□□ -2.35
HLA-DQA1P01909 AC090574.1-201ENST00000623186 233 ntBASIC0.35□□□□□ -2.35
HLA-DQA1P01909 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.34□□□□□ -2.35
HLA-DQA1P01909 Y_RNA.241-201ENST00000364470 117 ntBASIC0.34□□□□□ -2.36
HLA-DQA1P01909 SNORA24-201ENST00000384096 131 ntBASIC0.34□□□□□ -2.36
HLA-DQA1P01909 MIR1287-201ENST00000408492 90 ntBASIC0.34□□□□□ -2.36
HLA-DQA1P01909 RNU6-938P-201ENST00000411285 103 ntBASIC0.34□□□□□ -2.36
HLA-DQA1P01909 AC023449.1-201ENST00000454464 154 ntBASIC0.34□□□□□ -2.36
HLA-DQA1P01909 snoU13.16-201ENST00000459350 104 ntBASIC0.34□□□□□ -2.36
HLA-DQA1P01909 MIR4771-2-201ENST00000577758 74 ntBASIC0.34□□□□□ -2.36
HLA-DQA1P01909 MIR5692C2-201ENST00000577959 77 ntBASIC0.34□□□□□ -2.36
HLA-DQA1P01909 MIR4771-1-201ENST00000582617 74 ntBASIC0.34□□□□□ -2.36
HLA-DQA1P01909 AC020891.4-201ENST00000605745 93 ntBASIC0.34□□□□□ -2.36
HLA-DQA1P01909 Y_RNA.226-201ENST00000364337 114 ntBASIC0.33□□□□□ -2.36
HLA-DQA1P01909 SNORA63.7-201ENST00000365579 123 ntBASIC0.33□□□□□ -2.36
HLA-DQA1P01909 Y_RNA.394-201ENST00000383942 103 ntBASIC0.33□□□□□ -2.36
HLA-DQA1P01909 RNU6-662P-201ENST00000384253 104 ntBASIC0.33□□□□□ -2.36
HLA-DQA1P01909 MIR215-201ENST00000384858 110 ntBASIC0.33□□□□□ -2.36
HLA-DQA1P01909 MIR573-201ENST00000384964 99 ntBASIC0.33□□□□□ -2.36
HLA-DQA1P01909 MT-TD-201ENST00000387419 68 ntBASIC0.33□□□□□ -2.36
HLA-DQA1P01909 RNU6-913P-201ENST00000390913 95 ntBASIC0.33□□□□□ -2.36
HLA-DQA1P01909 Y_RNA.581-201ENST00000391017 97 ntBASIC0.33□□□□□ -2.36
HLA-DQA1P01909 RNA5SP496-201ENST00000391240 109 ntBASIC0.33□□□□□ -2.36
HLA-DQA1P01909 MIR1252-201ENST00000408861 65 ntBASIC0.33□□□□□ -2.36
HLA-DQA1P01909 RNU6-177P-201ENST00000411257 104 ntBASIC0.33□□□□□ -2.36
HLA-DQA1P01909 AC114737.2-201ENST00000421583 173 ntBASIC0.33□□□□□ -2.36
HLA-DQA1P01909 MTCO2P12-201ENST00000427426 682 ntBASIC0.33□□□□□ -2.36
HLA-DQA1P01909 AC091959.1-201ENST00000495857 238 ntBASIC0.33□□□□□ -2.36
HLA-DQA1P01909 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.33□□□□□ -2.36
HLA-DQA1P01909 MIR4804-201ENST00000581683 73 ntBASIC0.33□□□□□ -2.36
HLA-DQA1P01909 MIR4264-201ENST00000583520 66 ntBASIC0.33□□□□□ -2.36
HLA-DQA1P01909 AL512605.2-201ENST00000592972 256 ntBASIC0.33□□□□□ -2.36
HLA-DQA1P01909 AC134878.1-201ENST00000619901 243 ntBASIC0.33□□□□□ -2.36
HLA-DQA1P01909 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.32□□□□□ -2.36
HLA-DQA1P01909 Y_RNA.14-201ENST00000362415 103 ntBASIC0.32□□□□□ -2.36
HLA-DQA1P01909 SNORD115-34-201ENST00000362441 82 ntBASIC0.32□□□□□ -2.36
HLA-DQA1P01909 SNORD115-12-201ENST00000362583 82 ntBASIC0.32□□□□□ -2.36
HLA-DQA1P01909 RNU6-1272P-201ENST00000362776 107 ntBASIC0.32□□□□□ -2.36
HLA-DQA1P01909 SNORD115-29-201ENST00000362834 82 ntBASIC0.32□□□□□ -2.36
HLA-DQA1P01909 SNORD115-9-201ENST00000362912 82 ntBASIC0.32□□□□□ -2.36
HLA-DQA1P01909 SNORD115-21-201ENST00000362963 81 ntBASIC0.32□□□□□ -2.36
HLA-DQA1P01909 snoU2_19.2-201ENST00000363024 80 ntBASIC0.32□□□□□ -2.36
HLA-DQA1P01909 SNORD115-14-201ENST00000363090 81 ntBASIC0.32□□□□□ -2.36
HLA-DQA1P01909 SNORD115-13-201ENST00000363358 82 ntBASIC0.32□□□□□ -2.36
HLA-DQA1P01909 SNORD115-41-201ENST00000363608 82 ntBASIC0.32□□□□□ -2.36
HLA-DQA1P01909 SNORD115-11-201ENST00000363616 82 ntBASIC0.32□□□□□ -2.36
HLA-DQA1P01909 SNORD115-5-201ENST00000363633 82 ntBASIC0.32□□□□□ -2.36
HLA-DQA1P01909 SNORD115-39-201ENST00000363694 82 ntBASIC0.32□□□□□ -2.36
HLA-DQA1P01909 SNORD115-4-201ENST00000363810 82 ntBASIC0.32□□□□□ -2.36
HLA-DQA1P01909 SNORD115-16-201ENST00000363887 82 ntBASIC0.32□□□□□ -2.36
HLA-DQA1P01909 SNORD115-6-201ENST00000363942 82 ntBASIC0.32□□□□□ -2.36
HLA-DQA1P01909 SNORD115-42-201ENST00000364273 82 ntBASIC0.32□□□□□ -2.36
HLA-DQA1P01909 RNU4-10P-201ENST00000364383 140 ntBASIC0.32□□□□□ -2.36
HLA-DQA1P01909 SNORD115-15-201ENST00000364809 81 ntBASIC0.32□□□□□ -2.36
HLA-DQA1P01909 Y_RNA.293-201ENST00000364908 93 ntBASIC0.32□□□□□ -2.36
HLA-DQA1P01909 SNORD115-1-201ENST00000364961 82 ntBASIC0.32□□□□□ -2.36
HLA-DQA1P01909 SNORD115-26-201ENST00000365067 82 ntBASIC0.32□□□□□ -2.36
HLA-DQA1P01909 SNORD115-10-201ENST00000365073 81 ntBASIC0.32□□□□□ -2.36
HLA-DQA1P01909 RNU6-1138P-201ENST00000365359 106 ntBASIC0.32□□□□□ -2.36
HLA-DQA1P01909 SNORD115-43-201ENST00000365503 82 ntBASIC0.32□□□□□ -2.36
HLA-DQA1P01909 SNORD115-36-201ENST00000365629 82 ntBASIC0.32□□□□□ -2.36
HLA-DQA1P01909 Y_RNA.389-201ENST00000383924 113 ntBASIC0.32□□□□□ -2.36
HLA-DQA1P01909 RNU6-474P-201ENST00000384243 107 ntBASIC0.32□□□□□ -2.36
HLA-DQA1P01909 Y_RNA.541-201ENST00000384640 113 ntBASIC0.32□□□□□ -2.36
HLA-DQA1P01909 MIR140-201ENST00000385282 100 ntBASIC0.32□□□□□ -2.36
HLA-DQA1P01909 ELOCP20-201ENST00000422460 345 ntBASIC0.32□□□□□ -2.36
HLA-DQA1P01909 BTF3P11-201ENST00000426582 477 ntBASIC0.32□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms