Protein–RNA interactions for Protein: O95716

RAB3D, Ras-related protein Rab-3D, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3DO95716 SNORD115-43-201ENST00000365503 82 ntBASIC0.27□□□□□ -2.37
RAB3DO95716 SNORD115-36-201ENST00000365629 82 ntBASIC0.27□□□□□ -2.37
RAB3DO95716 Y_RNA.424-201ENST00000384063 103 ntBASIC0.27□□□□□ -2.37
RAB3DO95716 Y_RNA.486-201ENST00000384398 107 ntBASIC0.27□□□□□ -2.37
RAB3DO95716 Y_RNA.569-201ENST00000384749 103 ntBASIC0.27□□□□□ -2.37
RAB3DO95716 RNU6-679P-201ENST00000391003 106 ntBASIC0.27□□□□□ -2.37
RAB3DO95716 HMGN1P33-201ENST00000432945 451 ntBASIC0.27□□□□□ -2.37
RAB3DO95716 AC023449.1-201ENST00000454464 154 ntBASIC0.27□□□□□ -2.37
RAB3DO95716 AC002350.1-201ENST00000490759 375 ntBASIC0.27□□□□□ -2.37
RAB3DO95716 RNU6-475P-201ENST00000516073 104 ntBASIC0.27□□□□□ -2.37
RAB3DO95716 SNORA18.4-201ENST00000516440 124 ntBASIC0.27□□□□□ -2.37
RAB3DO95716 Y_RNA.715-201ENST00000517082 110 ntBASIC0.27□□□□□ -2.37
RAB3DO95716 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
RAB3DO95716 AC008608.1-201ENST00000603910 127 ntBASIC0.27□□□□□ -2.37
RAB3DO95716 AC124312.5-201ENST00000604451 268 ntBASIC0.27□□□□□ -2.37
RAB3DO95716 RAC1P9-201ENST00000604990 392 ntBASIC0.27□□□□□ -2.37
RAB3DO95716 SNORD115-40-201ENST00000606510 82 ntBASIC0.27□□□□□ -2.37
RAB3DO95716 MIR8055-201ENST00000610739 97 ntBASIC0.27□□□□□ -2.37
RAB3DO95716 MIR96-201ENST00000362288 78 ntBASIC0.26□□□□□ -2.37
RAB3DO95716 RNU4-73P-201ENST00000363164 141 ntBASIC0.26□□□□□ -2.37
RAB3DO95716 Y_RNA.112-201ENST00000363250 102 ntBASIC0.26□□□□□ -2.37
RAB3DO95716 SNORD115-28-201ENST00000363931 81 ntBASIC0.26□□□□□ -2.37
RAB3DO95716 RNU6-450P-201ENST00000364654 107 ntBASIC0.26□□□□□ -2.37
RAB3DO95716 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.26□□□□□ -2.37
RAB3DO95716 Y_RNA.445-201ENST00000384168 102 ntBASIC0.26□□□□□ -2.37
RAB3DO95716 RNU6-342P-201ENST00000384521 104 ntBASIC0.26□□□□□ -2.37
RAB3DO95716 SNORD115-46-201ENST00000390982 71 ntBASIC0.26□□□□□ -2.37
RAB3DO95716 Y_RNA.645-201ENST00000391229 102 ntBASIC0.26□□□□□ -2.37
RAB3DO95716 MTND4P19-201ENST00000446659 478 ntBASIC0.26□□□□□ -2.37
RAB3DO95716 Y_RNA.639-201ENST00000458981 102 ntBASIC0.26□□□□□ -2.37
RAB3DO95716 AC082651.2-201ENST00000496833 166 ntBASIC0.26□□□□□ -2.37
RAB3DO95716 RNU6-897P-201ENST00000517135 105 ntBASIC0.26□□□□□ -2.37
RAB3DO95716 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.26□□□□□ -2.37
RAB3DO95716 MIR4714-201ENST00000580728 77 ntBASIC0.26□□□□□ -2.37
RAB3DO95716 AL355297.3-201ENST00000604082 446 ntBASIC0.26□□□□□ -2.37
RAB3DO95716 AP000942.4-201ENST00000604811 241 ntBASIC0.26□□□□□ -2.37
RAB3DO95716 AC122108.2-201ENST00000611946 526 ntBASIC0.26□□□□□ -2.37
RAB3DO95716 MIR5087-201ENST00000635826 76 ntBASIC0.26□□□□□ -2.37
RAB3DO95716 MIR369-201ENST00000362155 70 ntBASIC0.25□□□□□ -2.37
RAB3DO95716 MIR103A1-201ENST00000362165 78 ntBASIC0.25□□□□□ -2.37
RAB3DO95716 Y_RNA.14-201ENST00000362415 103 ntBASIC0.25□□□□□ -2.37
RAB3DO95716 Y_RNA.31-201ENST00000362574 102 ntBASIC0.25□□□□□ -2.37
RAB3DO95716 RNU4-10P-201ENST00000364383 140 ntBASIC0.25□□□□□ -2.37
RAB3DO95716 RNU6-1138P-201ENST00000365359 106 ntBASIC0.25□□□□□ -2.37
RAB3DO95716 SNORD38B-201ENST00000384690 67 ntBASIC0.25□□□□□ -2.37
RAB3DO95716 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.25□□□□□ -2.37
RAB3DO95716 MIR938-201ENST00000401216 83 ntBASIC0.25□□□□□ -2.37
RAB3DO95716 RNU6-121P-201ENST00000410525 99 ntBASIC0.25□□□□□ -2.37
RAB3DO95716 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.25□□□□□ -2.37
RAB3DO95716 MTND5P20-201ENST00000448677 143 ntBASIC0.25□□□□□ -2.37
RAB3DO95716 TRMT112P2-201ENST00000512910 132 ntBASIC0.25□□□□□ -2.37
RAB3DO95716 MIR5692C2-201ENST00000577959 77 ntBASIC0.25□□□□□ -2.37
RAB3DO95716 AC092634.7-201ENST00000621022 103 ntBASIC0.25□□□□□ -2.37
RAB3DO95716 SNORD38B-202ENST00000625943 69 ntBASIC0.25□□□□□ -2.37
RAB3DO95716 Y_RNA.37-201ENST00000362606 108 ntBASIC0.24□□□□□ -2.37
RAB3DO95716 RNU4-90P-201ENST00000362773 141 ntBASIC0.24□□□□□ -2.37
RAB3DO95716 Y_RNA.183-201ENST00000363882 113 ntBASIC0.24□□□□□ -2.37
RAB3DO95716 RNU1-93P-201ENST00000364704 169 ntBASIC0.24□□□□□ -2.37
RAB3DO95716 RNA5SP517-201ENST00000364724 117 ntBASIC0.24□□□□□ -2.37
RAB3DO95716 Y_RNA.293-201ENST00000364908 93 ntBASIC0.24□□□□□ -2.37
RAB3DO95716 RNU6-662P-201ENST00000384253 104 ntBASIC0.24□□□□□ -2.37
RAB3DO95716 MIR588-201ENST00000384900 83 ntBASIC0.24□□□□□ -2.37
RAB3DO95716 MIR548A2-201ENST00000384956 97 ntBASIC0.24□□□□□ -2.37
RAB3DO95716 MIR518F-201ENST00000384973 87 ntBASIC0.24□□□□□ -2.37
RAB3DO95716 MIR216A-201ENST00000385063 110 ntBASIC0.24□□□□□ -2.37
RAB3DO95716 RNA5SP496-201ENST00000391240 109 ntBASIC0.24□□□□□ -2.37
RAB3DO95716 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.24□□□□□ -2.37
RAB3DO95716 AC098934.3-201ENST00000430450 190 ntBASIC0.24□□□□□ -2.37
RAB3DO95716 AC108740.1-201ENST00000498629 225 ntBASIC0.24□□□□□ -2.37
RAB3DO95716 MTND3P22-201ENST00000510932 243 ntBASIC0.24□□□□□ -2.37
RAB3DO95716 RNU6-693P-201ENST00000516134 107 ntBASIC0.24□□□□□ -2.37
RAB3DO95716 SNORD77.4-201ENST00000516158 81 ntBASIC0.24□□□□□ -2.37
RAB3DO95716 SNORD36C-201ENST00000516733 66 ntBASIC0.24□□□□□ -2.37
RAB3DO95716 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC0.24□□□□□ -2.37
RAB3DO95716 AL133255.1-201ENST00000606374 441 ntBASIC0.24□□□□□ -2.37
RAB3DO95716 Z97988.1-201ENST00000637697 135 ntBASIC0.24□□□□□ -2.37
RAB3DO95716 MIR367-201ENST00000362299 68 ntBASIC0.23□□□□□ -2.37
RAB3DO95716 RNU6-1272P-201ENST00000362776 107 ntBASIC0.23□□□□□ -2.37
RAB3DO95716 RNU6-1309P-201ENST00000363305 108 ntBASIC0.23□□□□□ -2.37
RAB3DO95716 RNU6-1327P-201ENST00000365302 105 ntBASIC0.23□□□□□ -2.37
RAB3DO95716 Y_RNA.394-201ENST00000383942 103 ntBASIC0.23□□□□□ -2.37
RAB3DO95716 Y_RNA.419-201ENST00000384041 102 ntBASIC0.23□□□□□ -2.37
RAB3DO95716 SNORD61-201ENST00000384252 73 ntBASIC0.23□□□□□ -2.37
RAB3DO95716 RNU6-823P-201ENST00000391042 103 ntBASIC0.23□□□□□ -2.37
RAB3DO95716 SNORA40.5-201ENST00000391061 128 ntBASIC0.23□□□□□ -2.37
RAB3DO95716 Y_RNA.587-201ENST00000391210 103 ntBASIC0.23□□□□□ -2.37
RAB3DO95716 RNU6-1190P-201ENST00000410811 104 ntBASIC0.23□□□□□ -2.37
RAB3DO95716 PMCHL1-202ENST00000423102 261 ntBASIC0.23□□□□□ -2.37
RAB3DO95716 AC087499.4-201ENST00000448505 178 ntBASIC0.23□□□□□ -2.37
RAB3DO95716 AL138752.1-201ENST00000452964 351 ntBASIC0.23□□□□□ -2.37
RAB3DO95716 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC0.23□□□□□ -2.37
RAB3DO95716 RNU7-73P-201ENST00000458743 63 ntBASIC0.23□□□□□ -2.37
RAB3DO95716 RNU7-102P-201ENST00000458948 62 ntBASIC0.23□□□□□ -2.37
RAB3DO95716 Y_RNA.702-201ENST00000516843 96 ntBASIC0.23□□□□□ -2.37
RAB3DO95716 RNU6-1270P-201ENST00000517128 108 ntBASIC0.23□□□□□ -2.37
RAB3DO95716 MIR4724-201ENST00000579485 89 ntBASIC0.23□□□□□ -2.37
RAB3DO95716 AL512605.2-201ENST00000592972 256 ntBASIC0.23□□□□□ -2.37
RAB3DO95716 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.23□□□□□ -2.37
RAB3DO95716 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.23□□□□□ -2.37
RAB3DO95716 AC090574.1-201ENST00000623186 233 ntBASIC0.23□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 169.9 ms