Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 ICE2P2-201ENST00000483823 2787 ntBASIC2.27□□□□□ -2.05
CNOT4O95628 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
CNOT4O95628 RNU6-349P-201ENST00000362402 107 ntBASIC2.26□□□□□ -2.05
CNOT4O95628 Y_RNA.198-201ENST00000364013 98 ntBASIC2.26□□□□□ -2.05
CNOT4O95628 Y_RNA.440-201ENST00000384120 114 ntBASIC2.26□□□□□ -2.05
CNOT4O95628 Y_RNA.549-201ENST00000384657 102 ntBASIC2.26□□□□□ -2.05
CNOT4O95628 MIR676-201ENST00000390702 67 ntBASIC2.26□□□□□ -2.05
CNOT4O95628 RNA5SP501-201ENST00000410990 112 ntBASIC2.26□□□□□ -2.05
CNOT4O95628 AL356379.1-201ENST00000414105 126 ntBASIC2.26□□□□□ -2.05
CNOT4O95628 Y_RNA.677-201ENST00000516401 85 ntBASIC2.26□□□□□ -2.05
CNOT4O95628 RNY4P20-201ENST00000516678 93 ntBASIC2.26□□□□□ -2.05
CNOT4O95628 MIR4299-201ENST00000577899 72 ntBASIC2.26□□□□□ -2.05
CNOT4O95628 MIR4769-201ENST00000584126 77 ntBASIC2.26□□□□□ -2.05
CNOT4O95628 AC015726.2-201ENST00000620112 122 ntBASIC2.26□□□□□ -2.05
CNOT4O95628 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
CNOT4O95628 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
CNOT4O95628 Y_RNA.213-201ENST00000364178 111 ntBASIC2.25□□□□□ -2.05
CNOT4O95628 RNA5SP212-201ENST00000391223 107 ntBASIC2.25□□□□□ -2.05
CNOT4O95628 SNORA3.2-201ENST00000408221 125 ntBASIC2.25□□□□□ -2.05
CNOT4O95628 STAG3L5P-204ENST00000443759 179 ntBASIC2.25□□□□□ -2.05
CNOT4O95628 AC087499.4-201ENST00000448505 178 ntBASIC2.25□□□□□ -2.05
CNOT4O95628 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC2.25□□□□□ -2.05
CNOT4O95628 RNU6-537P-201ENST00000517277 103 ntBASIC2.25□□□□□ -2.05
CNOT4O95628 AP003484.1-201ENST00000530974 250 ntBASIC2.25□□□□□ -2.05
CNOT4O95628 AC069114.2-201ENST00000604699 304 ntBASIC2.25□□□□□ -2.05
CNOT4O95628 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.25□□□□□ -2.05
CNOT4O95628 AL773524.1-201ENST00000614065 229 ntBASIC2.25□□□□□ -2.05
CNOT4O95628 AC009831.4-201ENST00000620744 325 ntBASIC2.25□□□□□ -2.05
CNOT4O95628 MIR8054-201ENST00000620877 86 ntBASIC2.25□□□□□ -2.05
CNOT4O95628 AL035470.1-201ENST00000622571 220 ntBASIC2.25□□□□□ -2.05
CNOT4O95628 AC106754.2-201ENST00000623006 233 ntBASIC2.25□□□□□ -2.05
CNOT4O95628 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
CNOT4O95628 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
CNOT4O95628 Y_RNA.163-201ENST00000363702 113 ntBASIC2.24□□□□□ -2.05
CNOT4O95628 RNA5SP456-201ENST00000364002 114 ntBASIC2.24□□□□□ -2.05
CNOT4O95628 RNU1-133P-201ENST00000364867 167 ntBASIC2.24□□□□□ -2.05
CNOT4O95628 DEFA7P-201ENST00000382676 285 ntBASIC2.24□□□□□ -2.05
CNOT4O95628 RNY1P6-201ENST00000384193 109 ntBASIC2.24□□□□□ -2.05
CNOT4O95628 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
CNOT4O95628 RNU6-440P-201ENST00000390882 105 ntBASIC2.24□□□□□ -2.05
CNOT4O95628 RNU6-938P-201ENST00000411285 103 ntBASIC2.24□□□□□ -2.05
CNOT4O95628 AC244636.1-201ENST00000421152 228 ntBASIC2.24□□□□□ -2.05
CNOT4O95628 snoU13.15-201ENST00000459407 104 ntBASIC2.24□□□□□ -2.05
CNOT4O95628 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
CNOT4O95628 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.24□□□□□ -2.05
CNOT4O95628 AC021443.1-201ENST00000604478 211 ntBASIC2.24□□□□□ -2.05
CNOT4O95628 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
CNOT4O95628 AL589743.1-201ENST00000551932 2712 ntBASIC2.24□□□□□ -2.05
CNOT4O95628 AL359851.1-201ENST00000569460 4997 ntBASIC2.23□□□□□ -2.05
CNOT4O95628 RNU6-766P-201ENST00000362478 107 ntBASIC2.23□□□□□ -2.05
CNOT4O95628 Y_RNA.49-201ENST00000362714 112 ntBASIC2.23□□□□□ -2.05
CNOT4O95628 SNORA63.5-201ENST00000363548 123 ntBASIC2.23□□□□□ -2.05
CNOT4O95628 RNY4P6-201ENST00000363667 96 ntBASIC2.23□□□□□ -2.05
CNOT4O95628 SNORD38C-201ENST00000384381 69 ntBASIC2.23□□□□□ -2.05
CNOT4O95628 RN7SKP192-201ENST00000411291 327 ntBASIC2.23□□□□□ -2.05
CNOT4O95628 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.23□□□□□ -2.05
CNOT4O95628 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.23□□□□□ -2.05
CNOT4O95628 AC114811.1-201ENST00000507207 168 ntBASIC2.23□□□□□ -2.05
CNOT4O95628 SNORA18.7-201ENST00000516910 131 ntBASIC2.23□□□□□ -2.05
CNOT4O95628 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.23□□□□□ -2.05
CNOT4O95628 SNORA28-201ENST00000606769 126 ntBASIC2.23□□□□□ -2.05
CNOT4O95628 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.23□□□□□ -2.05
CNOT4O95628 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
CNOT4O95628 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CNOT4O95628 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.22□□□□□ -2.05
CNOT4O95628 RNU6-1019P-201ENST00000364424 107 ntBASIC2.22□□□□□ -2.05
CNOT4O95628 Y_RNA.298-201ENST00000364960 107 ntBASIC2.22□□□□□ -2.05
CNOT4O95628 Y_RNA.351-201ENST00000365436 96 ntBASIC2.22□□□□□ -2.05
CNOT4O95628 RNU6-756P-201ENST00000383997 107 ntBASIC2.22□□□□□ -2.05
CNOT4O95628 RNU6-163P-201ENST00000384396 106 ntBASIC2.22□□□□□ -2.05
CNOT4O95628 MIR759-201ENST00000390224 91 ntBASIC2.22□□□□□ -2.05
CNOT4O95628 SNORA48.1-201ENST00000390879 135 ntBASIC2.22□□□□□ -2.05
CNOT4O95628 U8.17-201ENST00000391292 132 ntBASIC2.22□□□□□ -2.05
CNOT4O95628 MIR1302-5-201ENST00000408164 150 ntBASIC2.22□□□□□ -2.05
CNOT4O95628 RNU7-80P-201ENST00000459562 61 ntBASIC2.22□□□□□ -2.05
CNOT4O95628 SNORA72.7-201ENST00000516349 94 ntBASIC2.22□□□□□ -2.05
CNOT4O95628 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.22□□□□□ -2.05
CNOT4O95628 AC084364.2-201ENST00000546924 395 ntBASIC2.22□□□□□ -2.05
CNOT4O95628 MIR5582-201ENST00000579697 68 ntBASIC2.22□□□□□ -2.05
CNOT4O95628 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
CNOT4O95628 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
CNOT4O95628 SNORA25.6-201ENST00000364121 118 ntBASIC2.21□□□□□ -2.06
CNOT4O95628 Y_RNA.328-201ENST00000365208 113 ntBASIC2.21□□□□□ -2.06
CNOT4O95628 Y_RNA.362-201ENST00000365518 110 ntBASIC2.21□□□□□ -2.06
CNOT4O95628 RNU6-1014P-201ENST00000383940 103 ntBASIC2.21□□□□□ -2.06
CNOT4O95628 Y_RNA.454-201ENST00000384224 113 ntBASIC2.21□□□□□ -2.06
CNOT4O95628 AL627390.1-201ENST00000396055 340 ntBASIC2.21□□□□□ -2.06
CNOT4O95628 AL359511.1-201ENST00000402970 211 ntBASIC2.21□□□□□ -2.06
CNOT4O95628 Z98742.3-201ENST00000418637 326 ntBASIC2.21□□□□□ -2.06
CNOT4O95628 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.21□□□□□ -2.06
CNOT4O95628 RPL39P34-201ENST00000477141 156 ntBASIC2.21□□□□□ -2.06
CNOT4O95628 RNVU1-2-201ENST00000516326 135 ntBASIC2.21□□□□□ -2.06
CNOT4O95628 RNU6-1116P-201ENST00000517269 99 ntBASIC2.21□□□□□ -2.06
CNOT4O95628 AC002984.1-201ENST00000591692 448 ntBASIC2.21□□□□□ -2.06
CNOT4O95628 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.21□□□□□ -2.06
CNOT4O95628 RNU6-94P-201ENST00000607728 107 ntBASIC2.21□□□□□ -2.06
CNOT4O95628 AC091932.4-201ENST00000623386 200 ntBASIC2.21□□□□□ -2.06
CNOT4O95628 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.21□□□□□ -2.06
CNOT4O95628 AC016717.2-201ENST00000609089 5141 ntBASIC2.21□□□□□ -2.06
CNOT4O95628 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 158.4 ms