Protein–RNA interactions for Protein: O60749

SNX2, Sorting nexin-2, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2O60749 RNU6-209P-201ENST00000384118 107 ntBASIC1.72□□□□□ -2.13
SNX2O60749 Y_RNA.441-201ENST00000384123 112 ntBASIC1.72□□□□□ -2.13
SNX2O60749 AL627390.1-201ENST00000396055 340 ntBASIC1.72□□□□□ -2.13
SNX2O60749 AC092991.1-201ENST00000477176 376 ntBASIC1.72□□□□□ -2.13
SNX2O60749 RNU7-25P-201ENST00000516544 62 ntBASIC1.72□□□□□ -2.13
SNX2O60749 AL160236.1-201ENST00000556317 195 ntBASIC1.72□□□□□ -2.13
SNX2O60749 AC104465.1-201ENST00000611365 139 ntBASIC1.72□□□□□ -2.13
SNX2O60749 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
SNX2O60749 AL442644.1-201ENST00000454390 3105 ntBASIC1.71□□□□□ -2.14
SNX2O60749 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.71□□□□□ -2.14
SNX2O60749 Y_RNA.180-201ENST00000363867 113 ntBASIC1.71□□□□□ -2.14
SNX2O60749 MIR548A2-201ENST00000384956 97 ntBASIC1.71□□□□□ -2.14
SNX2O60749 SNORA79-201ENST00000408376 140 ntBASIC1.71□□□□□ -2.14
SNX2O60749 SNRPGP13-201ENST00000442212 177 ntBASIC1.71□□□□□ -2.14
SNX2O60749 RNU6-693P-201ENST00000516134 107 ntBASIC1.71□□□□□ -2.14
SNX2O60749 RNU6-1270P-201ENST00000517128 108 ntBASIC1.71□□□□□ -2.14
SNX2O60749 RNU4-84P-201ENST00000364200 139 ntBASIC1.7□□□□□ -2.14
SNX2O60749 RNA5SP190-201ENST00000365222 118 ntBASIC1.7□□□□□ -2.14
SNX2O60749 Y_RNA.547-201ENST00000384654 119 ntBASIC1.7□□□□□ -2.14
SNX2O60749 MIR518F-201ENST00000384973 87 ntBASIC1.7□□□□□ -2.14
SNX2O60749 MIR452-201ENST00000385020 85 ntBASIC1.7□□□□□ -2.14
SNX2O60749 RNU6-482P-201ENST00000391068 107 ntBASIC1.7□□□□□ -2.14
SNX2O60749 MIR548O-201ENST00000408583 114 ntBASIC1.7□□□□□ -2.14
SNX2O60749 SNX2P2-201ENST00000424553 323 ntBASIC1.7□□□□□ -2.14
SNX2O60749 RNU6-237P-201ENST00000515985 71 ntBASIC1.7□□□□□ -2.14
SNX2O60749 RNU6-504P-201ENST00000516568 104 ntBASIC1.7□□□□□ -2.14
SNX2O60749 RNU6-250P-201ENST00000516958 103 ntBASIC1.7□□□□□ -2.14
SNX2O60749 MIR378D2-201ENST00000580636 98 ntBASIC1.7□□□□□ -2.14
SNX2O60749 FAM106DP-201ENST00000586416 501 ntBASIC1.7□□□□□ -2.14
SNX2O60749 AP001485.1-201ENST00000604799 199 ntBASIC1.7□□□□□ -2.14
SNX2O60749 MIR502-201ENST00000606349 86 ntBASIC1.7□□□□□ -2.14
SNX2O60749 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.7□□□□□ -2.14
SNX2O60749 AC015726.2-201ENST00000620112 122 ntBASIC1.7□□□□□ -2.14
SNX2O60749 Y_RNA.140-201ENST00000363474 103 ntBASIC1.69□□□□□ -2.14
SNX2O60749 RNU6-978P-201ENST00000364371 103 ntBASIC1.69□□□□□ -2.14
SNX2O60749 Y_RNA.242-201ENST00000364473 110 ntBASIC1.69□□□□□ -2.14
SNX2O60749 SNORD48-201ENST00000364953 64 ntBASIC1.69□□□□□ -2.14
SNX2O60749 Y_RNA.357-201ENST00000365487 109 ntBASIC1.69□□□□□ -2.14
SNX2O60749 SNORD24-201ENST00000383884 75 ntBASIC1.69□□□□□ -2.14
SNX2O60749 SNORA1-201ENST00000384107 130 ntBASIC1.69□□□□□ -2.14
SNX2O60749 RNU6-804P-201ENST00000384286 107 ntBASIC1.69□□□□□ -2.14
SNX2O60749 RNU6-394P-201ENST00000410735 107 ntBASIC1.69□□□□□ -2.14
SNX2O60749 RNU1-98P-201ENST00000458992 160 ntBASIC1.69□□□□□ -2.14
SNX2O60749 SNORD13-201ENST00000459299 104 ntBASIC1.69□□□□□ -2.14
SNX2O60749 AL365434.2-201ENST00000607979 234 ntBASIC1.69□□□□□ -2.14
SNX2O60749 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.68□□□□□ -2.14
SNX2O60749 RNU6-888P-201ENST00000363010 101 ntBASIC1.68□□□□□ -2.14
SNX2O60749 Y_RNA.272-201ENST00000364696 102 ntBASIC1.68□□□□□ -2.14
SNX2O60749 RNU6-818P-201ENST00000364837 108 ntBASIC1.68□□□□□ -2.14
SNX2O60749 RNU6-1336P-201ENST00000383886 109 ntBASIC1.68□□□□□ -2.14
SNX2O60749 SNORD38C-201ENST00000384381 69 ntBASIC1.68□□□□□ -2.14
SNX2O60749 RNU6-239P-201ENST00000390990 99 ntBASIC1.68□□□□□ -2.14
SNX2O60749 SNORA26-201ENST00000391286 122 ntBASIC1.68□□□□□ -2.14
SNX2O60749 AC107027.2-201ENST00000512197 115 ntBASIC1.68□□□□□ -2.14
SNX2O60749 RNU6-126P-201ENST00000516685 103 ntBASIC1.68□□□□□ -2.14
SNX2O60749 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.68□□□□□ -2.14
SNX2O60749 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
SNX2O60749 RNA5SP363-201ENST00000365072 115 ntBASIC1.67□□□□□ -2.14
SNX2O60749 RNU6-1130P-201ENST00000365434 107 ntBASIC1.67□□□□□ -2.14
SNX2O60749 RNU6-768P-201ENST00000384683 107 ntBASIC1.67□□□□□ -2.14
SNX2O60749 MIR136-201ENST00000385207 82 ntBASIC1.67□□□□□ -2.14
SNX2O60749 MIR653-201ENST00000385279 96 ntBASIC1.67□□□□□ -2.14
SNX2O60749 RPS29P23-201ENST00000458635 123 ntBASIC1.67□□□□□ -2.14
SNX2O60749 AC005840.1-201ENST00000498412 377 ntBASIC1.67□□□□□ -2.14
SNX2O60749 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.67□□□□□ -2.14
SNX2O60749 RNU6-830P-201ENST00000516353 107 ntBASIC1.67□□□□□ -2.14
SNX2O60749 RNU7-121P-201ENST00000516604 62 ntBASIC1.67□□□□□ -2.14
SNX2O60749 AC021753.1-201ENST00000635724 168 ntBASIC1.67□□□□□ -2.14
SNX2O60749 MIR3658-201ENST00000636291 56 ntBASIC1.67□□□□□ -2.14
SNX2O60749 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
SNX2O60749 Y_RNA.8-201ENST00000362353 102 ntBASIC1.66□□□□□ -2.14
SNX2O60749 SNORA2.2-201ENST00000365473 135 ntBASIC1.66□□□□□ -2.14
SNX2O60749 Y_RNA.521-201ENST00000384560 114 ntBASIC1.66□□□□□ -2.14
SNX2O60749 RPS27P16-201ENST00000425758 201 ntBASIC1.66□□□□□ -2.14
SNX2O60749 AF228730.3-201ENST00000436691 102 ntBASIC1.66□□□□□ -2.14
SNX2O60749 RNU4-57P-201ENST00000515980 135 ntBASIC1.66□□□□□ -2.14
SNX2O60749 RNU6-255P-201ENST00000516957 105 ntBASIC1.66□□□□□ -2.14
SNX2O60749 AC019176.1-201ENST00000518519 225 ntBASIC1.66□□□□□ -2.14
SNX2O60749 MIR3144-201ENST00000579460 79 ntBASIC1.66□□□□□ -2.14
SNX2O60749 MIR3129-201ENST00000581095 76 ntBASIC1.66□□□□□ -2.14
SNX2O60749 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC1.66□□□□□ -2.14
SNX2O60749 AL161722.3-201ENST00000605789 2983 ntBASIC1.66□□□□□ -2.14
SNX2O60749 Y_RNA.398-201ENST00000383952 99 ntBASIC1.65□□□□□ -2.15
SNX2O60749 RNU6-938P-201ENST00000411285 103 ntBASIC1.65□□□□□ -2.15
SNX2O60749 SNORD116-25-201ENST00000516517 92 ntBASIC1.65□□□□□ -2.15
SNX2O60749 RNU6-922P-201ENST00000516753 99 ntBASIC1.65□□□□□ -2.15
SNX2O60749 SNORA18.7-201ENST00000516910 131 ntBASIC1.65□□□□□ -2.15
SNX2O60749 RNU7-181P-201ENST00000517234 74 ntBASIC1.65□□□□□ -2.15
SNX2O60749 MTND5P41-201ENST00000517498 206 ntBASIC1.65□□□□□ -2.15
SNX2O60749 AC090049.2-201ENST00000550377 109 ntBASIC1.65□□□□□ -2.15
SNX2O60749 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.64□□□□□ -2.15
SNX2O60749 SNORD115-28-201ENST00000363931 81 ntBASIC1.64□□□□□ -2.15
SNX2O60749 Y_RNA.337-201ENST00000365312 102 ntBASIC1.64□□□□□ -2.15
SNX2O60749 SNORD41-201ENST00000386967 70 ntBASIC1.64□□□□□ -2.15
SNX2O60749 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
SNX2O60749 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.64□□□□□ -2.15
SNX2O60749 RPL30P7-201ENST00000479312 323 ntBASIC1.64□□□□□ -2.15
SNX2O60749 MIR3683-201ENST00000580847 82 ntBASIC1.64□□□□□ -2.15
SNX2O60749 MIR376A2-201ENST00000636782 80 ntBASIC1.64□□□□□ -2.15
SNX2O60749 Y_RNA.37-201ENST00000362606 108 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms