Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 AC009161.1-201ENST00000417306 376 ntBASIC-0.39□□□□□ -2.47
SDCBPO00560 MTCO1P5-201ENST00000433573 344 ntBASIC-0.39□□□□□ -2.47
SDCBPO00560 SNORD4A-201ENST00000459174 72 ntBASIC-0.39□□□□□ -2.47
SDCBPO00560 AL670379.3-201ENST00000605040 251 ntBASIC-0.39□□□□□ -2.47
SDCBPO00560 AP001282.2-201ENST00000616149 309 ntBASIC-0.39□□□□□ -2.47
SDCBPO00560 MIR7111-201ENST00000619751 72 ntBASIC-0.39□□□□□ -2.47
SDCBPO00560 RNU6-674P-201ENST00000363831 107 ntBASIC-0.4□□□□□ -2.47
SDCBPO00560 RNU6-291P-201ENST00000384720 107 ntBASIC-0.4□□□□□ -2.47
SDCBPO00560 SNORA36B-201ENST00000410438 131 ntBASIC-0.4□□□□□ -2.47
SDCBPO00560 AC096949.1-201ENST00000412047 152 ntBASIC-0.4□□□□□ -2.47
SDCBPO00560 MTND1P2-201ENST00000430604 821 ntBASIC-0.4□□□□□ -2.47
SDCBPO00560 RPS3AP52-201ENST00000435639 297 ntBASIC-0.4□□□□□ -2.47
SDCBPO00560 Y_RNA.708-201ENST00000516950 96 ntBASIC-0.4□□□□□ -2.47
SDCBPO00560 OSBPL9P5-201ENST00000542581 171 ntBASIC-0.4□□□□□ -2.47
SDCBPO00560 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC-0.4□□□□□ -2.47
SDCBPO00560 MIR6082-201ENST00000613604 109 ntBASIC-0.4□□□□□ -2.47
SDCBPO00560 AC244669.1-204ENST00000621564 178 ntBASIC-0.4□□□□□ -2.47
SDCBPO00560 RNY3P11-201ENST00000364153 102 ntBASIC-0.41□□□□□ -2.48
SDCBPO00560 RNU6-1229P-201ENST00000364295 107 ntBASIC-0.41□□□□□ -2.48
SDCBPO00560 RNY3P4-201ENST00000384428 101 ntBASIC-0.41□□□□□ -2.48
SDCBPO00560 Y_RNA.570-201ENST00000384750 101 ntBASIC-0.41□□□□□ -2.48
SDCBPO00560 MIR214-201ENST00000385214 110 ntBASIC-0.41□□□□□ -2.48
SDCBPO00560 SNORA69.1-201ENST00000390904 137 ntBASIC-0.41□□□□□ -2.48
SDCBPO00560 MIR548K-201ENST00000408406 116 ntBASIC-0.41□□□□□ -2.48
SDCBPO00560 MIR548F5-201ENST00000408421 86 ntBASIC-0.41□□□□□ -2.48
SDCBPO00560 RNU6-1156P-201ENST00000410365 100 ntBASIC-0.41□□□□□ -2.48
SDCBPO00560 RNU6-373P-201ENST00000411247 98 ntBASIC-0.41□□□□□ -2.48
SDCBPO00560 AC104692.1-201ENST00000472406 90 ntBASIC-0.41□□□□□ -2.48
SDCBPO00560 Y_RNA.666-201ENST00000516187 112 ntBASIC-0.41□□□□□ -2.48
SDCBPO00560 MTND5P34-201ENST00000568888 325 ntBASIC-0.41□□□□□ -2.48
SDCBPO00560 MIR4659A-201ENST00000580269 81 ntBASIC-0.41□□□□□ -2.48
SDCBPO00560 MIR2681-201ENST00000581814 105 ntBASIC-0.41□□□□□ -2.48
SDCBPO00560 MIR4639-201ENST00000584938 69 ntBASIC-0.41□□□□□ -2.48
SDCBPO00560 AC005357.1-201ENST00000588399 301 ntBASIC-0.41□□□□□ -2.48
SDCBPO00560 Y_RNA.85-201ENST00000363014 111 ntBASIC-0.42□□□□□ -2.48
SDCBPO00560 RNU6-403P-201ENST00000363163 104 ntBASIC-0.42□□□□□ -2.48
SDCBPO00560 Y_RNA.174-201ENST00000363781 105 ntBASIC-0.42□□□□□ -2.48
SDCBPO00560 Y_RNA.230-201ENST00000364348 109 ntBASIC-0.42□□□□□ -2.48
SDCBPO00560 SNORD114-12-201ENST00000365400 75 ntBASIC-0.42□□□□□ -2.48
SDCBPO00560 RNU6-597P-201ENST00000365620 102 ntBASIC-0.42□□□□□ -2.48
SDCBPO00560 RNU6-708P-201ENST00000384217 107 ntBASIC-0.42□□□□□ -2.48
SDCBPO00560 U8.15-201ENST00000390947 134 ntBASIC-0.42□□□□□ -2.48
SDCBPO00560 SNORD78.2-201ENST00000391076 69 ntBASIC-0.42□□□□□ -2.48
SDCBPO00560 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-0.42□□□□□ -2.48
SDCBPO00560 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC-0.42□□□□□ -2.48
SDCBPO00560 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC-0.42□□□□□ -2.48
SDCBPO00560 RNU7-141P-201ENST00000459304 62 ntBASIC-0.42□□□□□ -2.48
SDCBPO00560 RN7SKP295-201ENST00000517264 153 ntBASIC-0.42□□□□□ -2.48
SDCBPO00560 MIR3145-201ENST00000580727 82 ntBASIC-0.42□□□□□ -2.48
SDCBPO00560 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC-0.42□□□□□ -2.48
SDCBPO00560 AC092447.9-201ENST00000603395 144 ntBASIC-0.42□□□□□ -2.48
SDCBPO00560 AL080274.1-201ENST00000605565 220 ntBASIC-0.42□□□□□ -2.48
SDCBPO00560 AL133255.1-201ENST00000606374 441 ntBASIC-0.42□□□□□ -2.48
SDCBPO00560 AC022140.2-201ENST00000623500 188 ntBASIC-0.42□□□□□ -2.48
SDCBPO00560 MIR3974-201ENST00000637126 96 ntBASIC-0.42□□□□□ -2.48
SDCBPO00560 SNORA18.1-201ENST00000363418 128 ntBASIC-0.43□□□□□ -2.48
SDCBPO00560 RNU6-593P-201ENST00000364716 112 ntBASIC-0.43□□□□□ -2.48
SDCBPO00560 SNORD116-9-201ENST00000384000 95 ntBASIC-0.43□□□□□ -2.48
SDCBPO00560 SNORD116-3-201ENST00000384287 95 ntBASIC-0.43□□□□□ -2.48
SDCBPO00560 SNORA27-201ENST00000384323 126 ntBASIC-0.43□□□□□ -2.48
SDCBPO00560 SNORD116-7-201ENST00000384404 95 ntBASIC-0.43□□□□□ -2.48
SDCBPO00560 SNORD116-5-201ENST00000384462 95 ntBASIC-0.43□□□□□ -2.48
SDCBPO00560 SNORA40.5-201ENST00000391061 128 ntBASIC-0.43□□□□□ -2.48
SDCBPO00560 AL138752.1-201ENST00000452964 351 ntBASIC-0.43□□□□□ -2.48
SDCBPO00560 RPS29P24-201ENST00000486345 171 ntBASIC-0.43□□□□□ -2.48
SDCBPO00560 RNU6-180P-201ENST00000516697 61 ntBASIC-0.43□□□□□ -2.48
SDCBPO00560 RNU6-1213P-201ENST00000517075 94 ntBASIC-0.43□□□□□ -2.48
SDCBPO00560 AC109635.3-201ENST00000529536 185 ntBASIC-0.43□□□□□ -2.48
SDCBPO00560 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC-0.43□□□□□ -2.48
SDCBPO00560 SNORA70.25-201ENST00000612741 95 ntBASIC-0.43□□□□□ -2.48
SDCBPO00560 MIR6779-201ENST00000617283 64 ntBASIC-0.43□□□□□ -2.48
SDCBPO00560 Y_RNA.41-201ENST00000362646 102 ntBASIC-0.44□□□□□ -2.48
SDCBPO00560 SNORD115-28-201ENST00000363931 81 ntBASIC-0.44□□□□□ -2.48
SDCBPO00560 Y_RNA.536-201ENST00000384621 113 ntBASIC-0.44□□□□□ -2.48
SDCBPO00560 MIR215-201ENST00000384858 110 ntBASIC-0.44□□□□□ -2.48
SDCBPO00560 MIR548A2-201ENST00000384956 97 ntBASIC-0.44□□□□□ -2.48
SDCBPO00560 AC108059.2-201ENST00000434626 151 ntBASIC-0.44□□□□□ -2.48
SDCBPO00560 MTND1P1-201ENST00000445453 368 ntBASIC-0.44□□□□□ -2.48
SDCBPO00560 RNU7-53P-201ENST00000516705 60 ntBASIC-0.44□□□□□ -2.48
SDCBPO00560 SNORD36C-201ENST00000516733 66 ntBASIC-0.44□□□□□ -2.48
SDCBPO00560 RNU7-149P-201ENST00000516739 59 ntBASIC-0.44□□□□□ -2.48
SDCBPO00560 RNU6-135P-201ENST00000516769 101 ntBASIC-0.44□□□□□ -2.48
SDCBPO00560 MIR4423-201ENST00000580922 80 ntBASIC-0.44□□□□□ -2.48
SDCBPO00560 MIR4491-201ENST00000581087 68 ntBASIC-0.44□□□□□ -2.48
SDCBPO00560 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC-0.44□□□□□ -2.48
SDCBPO00560 MIR3925-201ENST00000584674 77 ntBASIC-0.44□□□□□ -2.48
SDCBPO00560 MIR548AD-201ENST00000584780 82 ntBASIC-0.44□□□□□ -2.48
SDCBPO00560 AC015540.1-201ENST00000615828 501 ntBASIC-0.44□□□□□ -2.48
SDCBPO00560 TPTEP1-208ENST00000636884 213 ntBASIC-0.44□□□□□ -2.48
SDCBPO00560 Y_RNA.37-201ENST00000362606 108 ntBASIC-0.45□□□□□ -2.48
SDCBPO00560 RNA5SP457-201ENST00000363657 124 ntBASIC-0.45□□□□□ -2.48
SDCBPO00560 Y_RNA.339-201ENST00000365325 102 ntBASIC-0.45□□□□□ -2.48
SDCBPO00560 RNU6-652P-201ENST00000365488 107 ntBASIC-0.45□□□□□ -2.48
SDCBPO00560 Y_RNA.539-201ENST00000384635 107 ntBASIC-0.45□□□□□ -2.48
SDCBPO00560 MIR106A-201ENST00000384870 81 ntBASIC-0.45□□□□□ -2.48
SDCBPO00560 SNORA26.6-201ENST00000391256 115 ntBASIC-0.45□□□□□ -2.48
SDCBPO00560 MIR548I3-201ENST00000408378 149 ntBASIC-0.45□□□□□ -2.48
SDCBPO00560 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-0.45□□□□□ -2.48
SDCBPO00560 AC087499.4-201ENST00000448505 178 ntBASIC-0.45□□□□□ -2.48
SDCBPO00560 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC-0.45□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 205.4 ms