Protein–RNA interactions for Protein: O00479

HMGN4, High mobility group nucleosome-binding domain-containing protein 4, humanhuman

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4O00479 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.6□□□□□ -2.67
HMGN4O00479 RNU6-790P-201ENST00000384479 105 ntBASIC-1.6□□□□□ -2.67
HMGN4O00479 RNU6-601P-201ENST00000384540 107 ntBASIC-1.6□□□□□ -2.67
HMGN4O00479 MIR548O-201ENST00000408583 114 ntBASIC-1.6□□□□□ -2.67
HMGN4O00479 RNU6-195P-201ENST00000411352 109 ntBASIC-1.6□□□□□ -2.67
HMGN4O00479 CYCSP46-201ENST00000423569 204 ntBASIC-1.6□□□□□ -2.67
HMGN4O00479 AC022137.1-201ENST00000483735 151 ntBASIC-1.6□□□□□ -2.67
HMGN4O00479 AP002963.1-201ENST00000530590 184 ntBASIC-1.6□□□□□ -2.67
HMGN4O00479 MIR5188-201ENST00000583467 113 ntBASIC-1.6□□□□□ -2.67
HMGN4O00479 SNORD113-7-201ENST00000363762 77 ntBASIC-1.61□□□□□ -2.67
HMGN4O00479 SNORD77.3-201ENST00000391113 65 ntBASIC-1.61□□□□□ -2.67
HMGN4O00479 EIF1P2-201ENST00000428233 350 ntBASIC-1.61□□□□□ -2.67
HMGN4O00479 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC-1.61□□□□□ -2.67
HMGN4O00479 AL356010.1-201ENST00000456364 102 ntBASIC-1.61□□□□□ -2.67
HMGN4O00479 SNORD22.1-201ENST00000516331 125 ntBASIC-1.61□□□□□ -2.67
HMGN4O00479 RNU6-1332P-201ENST00000516666 104 ntBASIC-1.61□□□□□ -2.67
HMGN4O00479 RNU6-531P-201ENST00000516694 104 ntBASIC-1.61□□□□□ -2.67
HMGN4O00479 RNU7-116P-201ENST00000516940 62 ntBASIC-1.61□□□□□ -2.67
HMGN4O00479 RNU6-706P-201ENST00000517229 104 ntBASIC-1.61□□□□□ -2.67
HMGN4O00479 AP000676.1-201ENST00000533307 52 ntBASIC-1.61□□□□□ -2.67
HMGN4O00479 RNU6-653P-201ENST00000363074 106 ntBASIC-1.62□□□□□ -2.67
HMGN4O00479 RNU6-82P-201ENST00000363970 107 ntBASIC-1.62□□□□□ -2.67
HMGN4O00479 RNU1-141P-201ENST00000364623 158 ntBASIC-1.62□□□□□ -2.67
HMGN4O00479 Y_RNA.405-201ENST00000383979 100 ntBASIC-1.62□□□□□ -2.67
HMGN4O00479 Y_RNA.451-201ENST00000384200 100 ntBASIC-1.62□□□□□ -2.67
HMGN4O00479 Y_RNA.524-201ENST00000384564 100 ntBASIC-1.62□□□□□ -2.67
HMGN4O00479 Y_RNA.561-201ENST00000384694 100 ntBASIC-1.62□□□□□ -2.67
HMGN4O00479 RNU7-55P-201ENST00000459426 62 ntBASIC-1.62□□□□□ -2.67
HMGN4O00479 RNA5SP33-201ENST00000516687 98 ntBASIC-1.62□□□□□ -2.67
HMGN4O00479 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-1.62□□□□□ -2.67
HMGN4O00479 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC-1.62□□□□□ -2.67
HMGN4O00479 MIR5696-201ENST00000578474 85 ntBASIC-1.62□□□□□ -2.67
HMGN4O00479 AC009161.2-201ENST00000624626 138 ntBASIC-1.62□□□□□ -2.67
HMGN4O00479 SNORD24-201ENST00000383884 75 ntBASIC-1.63□□□□□ -2.67
HMGN4O00479 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.63□□□□□ -2.67
HMGN4O00479 USMG5P1-201ENST00000425964 177 ntBASIC-1.63□□□□□ -2.67
HMGN4O00479 AC009961.2-201ENST00000435771 251 ntBASIC-1.63□□□□□ -2.67
HMGN4O00479 TPTE2P5-203ENST00000458118 728 ntBASIC-1.63□□□□□ -2.67
HMGN4O00479 RNU7-187P-201ENST00000458985 68 ntBASIC-1.63□□□□□ -2.67
HMGN4O00479 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC-1.63□□□□□ -2.67
HMGN4O00479 MIR4424-201ENST00000585257 86 ntBASIC-1.63□□□□□ -2.67
HMGN4O00479 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC-1.63□□□□□ -2.67
HMGN4O00479 MIR6717-201ENST00000622747 73 ntBASIC-1.63□□□□□ -2.67
HMGN4O00479 Y_RNA.12-201ENST00000362393 112 ntBASIC-1.64□□□□□ -2.67
HMGN4O00479 Y_RNA.38-201ENST00000362617 102 ntBASIC-1.64□□□□□ -2.67
HMGN4O00479 RNY1P16-201ENST00000363063 111 ntBASIC-1.64□□□□□ -2.67
HMGN4O00479 MIR626-201ENST00000385032 94 ntBASIC-1.64□□□□□ -2.67
HMGN4O00479 SNORA26.6-201ENST00000391256 115 ntBASIC-1.64□□□□□ -2.67
HMGN4O00479 RNU6-938P-201ENST00000411285 103 ntBASIC-1.64□□□□□ -2.67
HMGN4O00479 RNU7-74P-201ENST00000459104 62 ntBASIC-1.64□□□□□ -2.67
HMGN4O00479 AC245884.10-201ENST00000597355 337 ntBASIC-1.64□□□□□ -2.67
HMGN4O00479 AC092747.3-201ENST00000603769 301 ntBASIC-1.64□□□□□ -2.67
HMGN4O00479 AC022441.3-201ENST00000605737 136 ntBASIC-1.64□□□□□ -2.67
HMGN4O00479 AC091931.1-201ENST00000623488 728 ntBASIC-1.64□□□□□ -2.67
HMGN4O00479 Y_RNA.151-201ENST00000363566 112 ntBASIC-1.65□□□□□ -2.67
HMGN4O00479 RNU5F-7P-201ENST00000363696 115 ntBASIC-1.65□□□□□ -2.67
HMGN4O00479 SNORD115-28-201ENST00000363931 81 ntBASIC-1.65□□□□□ -2.67
HMGN4O00479 RNU6-597P-201ENST00000365620 102 ntBASIC-1.65□□□□□ -2.67
HMGN4O00479 RNU2-9P-201ENST00000410194 145 ntBASIC-1.65□□□□□ -2.67
HMGN4O00479 AP000533.3-201ENST00000447704 118 ntBASIC-1.65□□□□□ -2.67
HMGN4O00479 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC-1.65□□□□□ -2.67
HMGN4O00479 MTND1P11-201ENST00000456661 876 ntBASIC-1.65□□□□□ -2.67
HMGN4O00479 snoU13.13-201ENST00000458842 104 ntBASIC-1.65□□□□□ -2.67
HMGN4O00479 SNORA40.9-201ENST00000515895 93 ntBASIC-1.65□□□□□ -2.67
HMGN4O00479 SNORA19.2-201ENST00000516013 114 ntBASIC-1.65□□□□□ -2.67
HMGN4O00479 MIR2681-201ENST00000581814 105 ntBASIC-1.65□□□□□ -2.67
HMGN4O00479 MIR4999-201ENST00000585029 91 ntBASIC-1.65□□□□□ -2.67
HMGN4O00479 AC069503.3-201ENST00000618674 145 ntBASIC-1.65□□□□□ -2.67
HMGN4O00479 SNORD64-201ENST00000386683 67 ntBASIC-1.66□□□□□ -2.68
HMGN4O00479 RNU6-1242P-201ENST00000391052 103 ntBASIC-1.66□□□□□ -2.68
HMGN4O00479 MTCYBP8-201ENST00000422855 651 ntBASIC-1.66□□□□□ -2.68
HMGN4O00479 FCF1P4-201ENST00000448326 183 ntBASIC-1.66□□□□□ -2.68
HMGN4O00479 PCMTD1P1-201ENST00000455560 355 ntBASIC-1.66□□□□□ -2.68
HMGN4O00479 RNU7-96P-201ENST00000459535 64 ntBASIC-1.66□□□□□ -2.68
HMGN4O00479 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC-1.66□□□□□ -2.68
HMGN4O00479 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-1.66□□□□□ -2.68
HMGN4O00479 Y_RNA.106-201ENST00000363189 100 ntBASIC-1.67□□□□□ -2.68
HMGN4O00479 Y_RNA.221-201ENST00000364248 96 ntBASIC-1.67□□□□□ -2.68
HMGN4O00479 RNU4-66P-201ENST00000365199 138 ntBASIC-1.67□□□□□ -2.68
HMGN4O00479 RNU6-282P-201ENST00000365357 103 ntBASIC-1.67□□□□□ -2.68
HMGN4O00479 RNU6-431P-201ENST00000383874 107 ntBASIC-1.67□□□□□ -2.68
HMGN4O00479 Y_RNA.458-201ENST00000384240 102 ntBASIC-1.67□□□□□ -2.68
HMGN4O00479 AL606923.1-201ENST00000406616 190 ntBASIC-1.67□□□□□ -2.68
HMGN4O00479 RNU6-1203P-201ENST00000410703 110 ntBASIC-1.67□□□□□ -2.68
HMGN4O00479 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC-1.67□□□□□ -2.68
HMGN4O00479 MTND3P21-201ENST00000433774 331 ntBASIC-1.67□□□□□ -2.68
HMGN4O00479 RNA5SP461-201ENST00000516451 104 ntBASIC-1.67□□□□□ -2.68
HMGN4O00479 Y_RNA.706-201ENST00000516933 99 ntBASIC-1.67□□□□□ -2.68
HMGN4O00479 RNU6-154P-201ENST00000384306 106 ntBASIC-1.68□□□□□ -2.68
HMGN4O00479 RNU6-83P-201ENST00000384568 112 ntBASIC-1.68□□□□□ -2.68
HMGN4O00479 MIR147A-201ENST00000385079 72 ntBASIC-1.68□□□□□ -2.68
HMGN4O00479 RNU6-998P-201ENST00000515894 101 ntBASIC-1.68□□□□□ -2.68
HMGN4O00479 ACA59.1-201ENST00000515966 143 ntBASIC-1.68□□□□□ -2.68
HMGN4O00479 YWHAEP2-201ENST00000580066 112 ntBASIC-1.68□□□□□ -2.68
HMGN4O00479 MIR3920-201ENST00000581751 86 ntBASIC-1.68□□□□□ -2.68
HMGN4O00479 AP003357.1-201ENST00000604497 148 ntBASIC-1.68□□□□□ -2.68
HMGN4O00479 AC087752.4-201ENST00000605911 462 ntBASIC-1.68□□□□□ -2.68
HMGN4O00479 AC004467.1-201ENST00000615678 330 ntBASIC-1.68□□□□□ -2.68
HMGN4O00479 MIR382-201ENST00000637119 76 ntBASIC-1.68□□□□□ -2.68
HMGN4O00479 RNU6-636P-201ENST00000384598 107 ntBASIC-1.69□□□□□ -2.68
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms