Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 RNU7-41P-201ENST00000515917 61 ntBASIC1.09□□□□□ -2.23
O00370 RN7SKP164-201ENST00000516138 266 ntBASIC1.09□□□□□ -2.23
O00370 MIR4764-201ENST00000580680 88 ntBASIC1.09□□□□□ -2.23
O00370 AL078603.1-201ENST00000603824 313 ntBASIC1.09□□□□□ -2.23
O00370 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.09□□□□□ -2.23
O00370 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.24
O00370 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
O00370 Y_RNA.229-201ENST00000364347 113 ntBASIC1.08□□□□□ -2.24
O00370 MIR526A2-201ENST00000390198 65 ntBASIC1.08□□□□□ -2.24
O00370 SNORD28B-201ENST00000390993 75 ntBASIC1.08□□□□□ -2.24
O00370 RNA5SP496-201ENST00000391240 109 ntBASIC1.08□□□□□ -2.24
O00370 MIR548O-201ENST00000408583 114 ntBASIC1.08□□□□□ -2.24
O00370 RNU7-25P-201ENST00000516544 62 ntBASIC1.08□□□□□ -2.24
O00370 AC100767.1-201ENST00000528178 123 ntBASIC1.08□□□□□ -2.24
O00370 AC027335.2-201ENST00000624030 375 ntBASIC1.08□□□□□ -2.24
O00370 Y_RNA.133-201ENST00000363428 110 ntBASIC1.07□□□□□ -2.24
O00370 RNU4-38P-201ENST00000364472 129 ntBASIC1.07□□□□□ -2.24
O00370 RNU1-93P-201ENST00000364704 169 ntBASIC1.07□□□□□ -2.24
O00370 Y_RNA.330-201ENST00000365230 109 ntBASIC1.07□□□□□ -2.24
O00370 Y_RNA.352-201ENST00000365439 102 ntBASIC1.07□□□□□ -2.24
O00370 RNU6-574P-201ENST00000384265 107 ntBASIC1.07□□□□□ -2.24
O00370 MIR568-201ENST00000385036 95 ntBASIC1.07□□□□□ -2.24
O00370 Y_RNA.622-201ENST00000411091 108 ntBASIC1.07□□□□□ -2.24
O00370 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.07□□□□□ -2.24
O00370 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.07□□□□□ -2.24
O00370 MTND3P2-201ENST00000438452 342 ntBASIC1.07□□□□□ -2.24
O00370 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.07□□□□□ -2.24
O00370 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.07□□□□□ -2.24
O00370 Y_RNA.666-201ENST00000516187 112 ntBASIC1.07□□□□□ -2.24
O00370 AL021707.8-201ENST00000609428 183 ntBASIC1.07□□□□□ -2.24
O00370 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.07□□□□□ -2.24
O00370 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.07□□□□□ -2.24
O00370 MIR103A2-201ENST00000362154 78 ntBASIC1.06□□□□□ -2.24
O00370 Y_RNA.65-201ENST00000362846 100 ntBASIC1.06□□□□□ -2.24
O00370 Y_RNA.242-201ENST00000364473 110 ntBASIC1.06□□□□□ -2.24
O00370 Y_RNA.416-201ENST00000384014 113 ntBASIC1.06□□□□□ -2.24
O00370 RNU6-42P-201ENST00000384165 107 ntBASIC1.06□□□□□ -2.24
O00370 RNU6-196P-201ENST00000384315 107 ntBASIC1.06□□□□□ -2.24
O00370 MT-TT-201ENST00000387460 66 ntBASIC1.06□□□□□ -2.24
O00370 U8.17-201ENST00000391292 132 ntBASIC1.06□□□□□ -2.24
O00370 MIR548H3-201ENST00000408771 118 ntBASIC1.06□□□□□ -2.24
O00370 SNRPGP14-201ENST00000435400 219 ntBASIC1.06□□□□□ -2.24
O00370 SNORD127-201ENST00000458892 86 ntBASIC1.06□□□□□ -2.24
O00370 RNU6-1132P-201ENST00000459214 107 ntBASIC1.06□□□□□ -2.24
O00370 SNORD116-28-201ENST00000516123 91 ntBASIC1.06□□□□□ -2.24
O00370 RNU7-43P-201ENST00000516554 64 ntBASIC1.06□□□□□ -2.24
O00370 RNU6-1270P-201ENST00000517128 108 ntBASIC1.06□□□□□ -2.24
O00370 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
O00370 MIR6734-201ENST00000621166 68 ntBASIC1.06□□□□□ -2.24
O00370 AC008133.2-201ENST00000624540 351 ntBASIC1.06□□□□□ -2.24
O00370 MIR6767-201ENST00000637302 66 ntBASIC1.06□□□□□ -2.24
O00370 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
O00370 Y_RNA.82-201ENST00000363000 102 ntBASIC1.05□□□□□ -2.24
O00370 Y_RNA.92-201ENST00000363043 102 ntBASIC1.05□□□□□ -2.24
O00370 Y_RNA.199-201ENST00000364014 102 ntBASIC1.05□□□□□ -2.24
O00370 Y_RNA.235-201ENST00000364412 102 ntBASIC1.05□□□□□ -2.24
O00370 Y_RNA.306-201ENST00000365015 102 ntBASIC1.05□□□□□ -2.24
O00370 Y_RNA.312-201ENST00000365089 102 ntBASIC1.05□□□□□ -2.24
O00370 Y_RNA.322-201ENST00000365151 102 ntBASIC1.05□□□□□ -2.24
O00370 MIR520E-201ENST00000384867 87 ntBASIC1.05□□□□□ -2.24
O00370 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.05□□□□□ -2.24
O00370 Y_RNA.650-201ENST00000459002 102 ntBASIC1.05□□□□□ -2.24
O00370 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.05□□□□□ -2.24
O00370 UBL5P1-201ENST00000507979 193 ntBASIC1.05□□□□□ -2.24
O00370 RNA5SP220-201ENST00000516298 104 ntBASIC1.05□□□□□ -2.24
O00370 Y_RNA.777-201ENST00000516982 102 ntBASIC1.05□□□□□ -2.24
O00370 MIR4643-201ENST00000577473 78 ntBASIC1.05□□□□□ -2.24
O00370 MIR548AR-201ENST00000582191 57 ntBASIC1.05□□□□□ -2.24
O00370 Y_RNA.771-201ENST00000598668 102 ntBASIC1.05□□□□□ -2.24
O00370 HSPE1P19-201ENST00000603327 295 ntBASIC1.05□□□□□ -2.24
O00370 RMST_2.1-201ENST00000617263 136 ntBASIC1.05□□□□□ -2.24
O00370 AC012676.2-201ENST00000619258 186 ntBASIC1.05□□□□□ -2.24
O00370 AL365265.1-201ENST00000621045 234 ntBASIC1.05□□□□□ -2.24
O00370 Y_RNA.789-201ENST00000622480 102 ntBASIC1.05□□□□□ -2.24
O00370 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.05□□□□□ -2.24
O00370 RNU1-124P-201ENST00000363861 145 ntBASIC1.04□□□□□ -2.24
O00370 MIR626-201ENST00000385032 94 ntBASIC1.04□□□□□ -2.24
O00370 SNORD2.1-201ENST00000458762 69 ntBASIC1.04□□□□□ -2.24
O00370 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.04□□□□□ -2.24
O00370 SNORD77.4-201ENST00000516158 81 ntBASIC1.04□□□□□ -2.24
O00370 RNU6-453P-201ENST00000516819 85 ntBASIC1.04□□□□□ -2.24
O00370 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.04□□□□□ -2.24
O00370 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.04□□□□□ -2.24
O00370 MIR4251-201ENST00000635819 61 ntBASIC1.04□□□□□ -2.24
O00370 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.04□□□□□ -2.24
O00370 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.04□□□□□ -2.24
O00370 AC008163.1-202ENST00000636004 2889 ntBASIC1.03□□□□□ -2.24
O00370 Y_RNA.76-201ENST00000362931 109 ntBASIC1.03□□□□□ -2.24
O00370 RNA5SP48-201ENST00000363969 126 ntBASIC1.03□□□□□ -2.24
O00370 Y_RNA.363-201ENST00000365529 113 ntBASIC1.03□□□□□ -2.24
O00370 RNU4-17P-201ENST00000365598 141 ntBASIC1.03□□□□□ -2.24
O00370 Y_RNA.486-201ENST00000384398 107 ntBASIC1.03□□□□□ -2.24
O00370 Y_RNA.556-201ENST00000384677 113 ntBASIC1.03□□□□□ -2.24
O00370 SNORA75.2-201ENST00000391138 150 ntBASIC1.03□□□□□ -2.24
O00370 SNORA75.3-201ENST00000391231 150 ntBASIC1.03□□□□□ -2.24
O00370 RNU2-70P-201ENST00000410718 179 ntBASIC1.03□□□□□ -2.24
O00370 snoU13.25-201ENST00000458945 104 ntBASIC1.03□□□□□ -2.24
O00370 RPS29P1-201ENST00000465274 159 ntBASIC1.03□□□□□ -2.24
O00370 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.03□□□□□ -2.24
O00370 AL391903.3-201ENST00000612158 163 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 169.8 ms