Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 SNORD92-201ENST00000585078 85 ntBASIC-0.04□□□□□ -2.42
UPK1AO00322 MIR4768-201ENST00000585270 74 ntBASIC-0.04□□□□□ -2.42
UPK1AO00322 SNORD115-40-201ENST00000606510 82 ntBASIC-0.04□□□□□ -2.42
UPK1AO00322 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC-0.04□□□□□ -2.42
UPK1AO00322 Y_RNA.118-201ENST00000363300 101 ntBASIC-0.05□□□□□ -2.42
UPK1AO00322 Y_RNA.462-201ENST00000384268 102 ntBASIC-0.05□□□□□ -2.42
UPK1AO00322 RNU6-21P-201ENST00000384710 107 ntBASIC-0.05□□□□□ -2.42
UPK1AO00322 MIR588-201ENST00000384900 83 ntBASIC-0.05□□□□□ -2.42
UPK1AO00322 RNU2-59P-201ENST00000410482 191 ntBASIC-0.05□□□□□ -2.42
UPK1AO00322 Y_RNA.653-201ENST00000459091 95 ntBASIC-0.05□□□□□ -2.42
UPK1AO00322 RNU6-358P-201ENST00000516564 75 ntBASIC-0.05□□□□□ -2.42
UPK1AO00322 AP003327.1-201ENST00000529684 127 ntBASIC-0.05□□□□□ -2.42
UPK1AO00322 AC133485.4-201ENST00000561835 220 ntBASIC-0.05□□□□□ -2.42
UPK1AO00322 MIR4423-201ENST00000580922 80 ntBASIC-0.05□□□□□ -2.42
UPK1AO00322 AC005357.1-201ENST00000588399 301 ntBASIC-0.05□□□□□ -2.42
UPK1AO00322 VN1R91P-201ENST00000594377 169 ntBASIC-0.05□□□□□ -2.42
UPK1AO00322 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC-0.06□□□□□ -2.42
UPK1AO00322 RNA5SP214-201ENST00000363378 118 ntBASIC-0.06□□□□□ -2.42
UPK1AO00322 MIR193B-201ENST00000384907 83 ntBASIC-0.06□□□□□ -2.42
UPK1AO00322 RNU6-1248P-201ENST00000391096 64 ntBASIC-0.06□□□□□ -2.42
UPK1AO00322 RNU6ATAC19P-201ENST00000408096 110 ntBASIC-0.06□□□□□ -2.42
UPK1AO00322 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.06□□□□□ -2.42
UPK1AO00322 RNU7-53P-201ENST00000516705 60 ntBASIC-0.06□□□□□ -2.42
UPK1AO00322 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC-0.06□□□□□ -2.42
UPK1AO00322 MIR371B-201ENST00000638082 66 ntBASIC-0.06□□□□□ -2.42
UPK1AO00322 SNORA9.1-201ENST00000362412 131 ntBASIC-0.07□□□□□ -2.42
UPK1AO00322 RNU6-490P-201ENST00000362985 107 ntBASIC-0.07□□□□□ -2.42
UPK1AO00322 SNORD81.1-201ENST00000363064 77 ntBASIC-0.07□□□□□ -2.42
UPK1AO00322 RNU6-1048P-201ENST00000364054 107 ntBASIC-0.07□□□□□ -2.42
UPK1AO00322 RNU4-50P-201ENST00000364361 141 ntBASIC-0.07□□□□□ -2.42
UPK1AO00322 SNORD114-9-201ENST00000364370 72 ntBASIC-0.07□□□□□ -2.42
UPK1AO00322 SNORA1.1-201ENST00000364671 133 ntBASIC-0.07□□□□□ -2.42
UPK1AO00322 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.07□□□□□ -2.42
UPK1AO00322 RNU7-73P-201ENST00000458743 63 ntBASIC-0.07□□□□□ -2.42
UPK1AO00322 AC069439.1-201ENST00000494739 167 ntBASIC-0.07□□□□□ -2.42
UPK1AO00322 RNA5SP227-201ENST00000516184 113 ntBASIC-0.07□□□□□ -2.42
UPK1AO00322 Y_RNA.691-201ENST00000516611 103 ntBASIC-0.07□□□□□ -2.42
UPK1AO00322 AP000942.4-201ENST00000604811 241 ntBASIC-0.07□□□□□ -2.42
UPK1AO00322 5S_rRNA.15-201ENST00000611169 127 ntBASIC-0.07□□□□□ -2.42
UPK1AO00322 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC-0.07□□□□□ -2.42
UPK1AO00322 AC138305.3-201ENST00000624988 240 ntBASIC-0.07□□□□□ -2.42
UPK1AO00322 RNU6-845P-201ENST00000362578 103 ntBASIC-0.08□□□□□ -2.42
UPK1AO00322 RNU6-1309P-201ENST00000363305 108 ntBASIC-0.08□□□□□ -2.42
UPK1AO00322 SNORA72.4-201ENST00000384174 132 ntBASIC-0.08□□□□□ -2.42
UPK1AO00322 Y_RNA.494-201ENST00000384432 111 ntBASIC-0.08□□□□□ -2.42
UPK1AO00322 AC087499.4-201ENST00000448505 178 ntBASIC-0.08□□□□□ -2.42
UPK1AO00322 snoU13.2-201ENST00000459201 104 ntBASIC-0.08□□□□□ -2.42
UPK1AO00322 AC104408.1-201ENST00000605241 170 ntBASIC-0.08□□□□□ -2.42
UPK1AO00322 AC010205.1-201ENST00000616668 449 ntBASIC-0.08□□□□□ -2.42
UPK1AO00322 Z97988.1-201ENST00000637697 135 ntBASIC-0.08□□□□□ -2.42
UPK1AO00322 MIR330-201ENST00000362196 94 ntBASIC-0.09□□□□□ -2.42
UPK1AO00322 Y_RNA.6-201ENST00000362350 114 ntBASIC-0.09□□□□□ -2.42
UPK1AO00322 Y_RNA.112-201ENST00000363250 102 ntBASIC-0.09□□□□□ -2.42
UPK1AO00322 SNORA72.1-201ENST00000363485 129 ntBASIC-0.09□□□□□ -2.42
UPK1AO00322 SNORD115-28-201ENST00000363931 81 ntBASIC-0.09□□□□□ -2.42
UPK1AO00322 MT-TF-201ENST00000387314 71 ntBASIC-0.09□□□□□ -2.42
UPK1AO00322 RNU6-913P-201ENST00000390913 95 ntBASIC-0.09□□□□□ -2.42
UPK1AO00322 SNORA40.5-201ENST00000391061 128 ntBASIC-0.09□□□□□ -2.42
UPK1AO00322 FCF1P9-201ENST00000412546 282 ntBASIC-0.09□□□□□ -2.42
UPK1AO00322 AL589823.1-201ENST00000429577 183 ntBASIC-0.09□□□□□ -2.42
UPK1AO00322 POLR2KP2-201ENST00000438155 177 ntBASIC-0.09□□□□□ -2.42
UPK1AO00322 RPL39P25-201ENST00000449384 154 ntBASIC-0.09□□□□□ -2.42
UPK1AO00322 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC-0.09□□□□□ -2.42
UPK1AO00322 RNU7-149P-201ENST00000516739 59 ntBASIC-0.09□□□□□ -2.42
UPK1AO00322 MIR8055-201ENST00000610739 97 ntBASIC-0.09□□□□□ -2.42
UPK1AO00322 Y_RNA.166-201ENST00000363730 102 ntBASIC-0.1□□□□□ -2.43
UPK1AO00322 RNU4-30P-201ENST00000410245 143 ntBASIC-0.1□□□□□ -2.43
UPK1AO00322 RNU2-14P-201ENST00000411053 191 ntBASIC-0.1□□□□□ -2.43
UPK1AO00322 AL358176.2-201ENST00000425769 204 ntBASIC-0.1□□□□□ -2.43
UPK1AO00322 HMGN1P33-201ENST00000432945 451 ntBASIC-0.1□□□□□ -2.43
UPK1AO00322 RNU6-1170P-201ENST00000515974 106 ntBASIC-0.1□□□□□ -2.43
UPK1AO00322 RNU6-559P-201ENST00000516151 98 ntBASIC-0.1□□□□□ -2.43
UPK1AO00322 MIR4290-201ENST00000583807 95 ntBASIC-0.1□□□□□ -2.43
UPK1AO00322 RPS29P30-201ENST00000600975 111 ntBASIC-0.1□□□□□ -2.43
UPK1AO00322 AC084782.3-201ENST00000612282 578 ntBASIC-0.1□□□□□ -2.43
UPK1AO00322 AC025253.1-201ENST00000613623 543 ntBASIC-0.1□□□□□ -2.43
UPK1AO00322 AC022140.2-201ENST00000623500 188 ntBASIC-0.1□□□□□ -2.43
UPK1AO00322 Y_RNA.160-201ENST00000363677 92 ntBASIC-0.11□□□□□ -2.43
UPK1AO00322 RNY3-201ENST00000365484 102 ntBASIC-0.11□□□□□ -2.43
UPK1AO00322 Y_RNA.383-201ENST00000383855 97 ntBASIC-0.11□□□□□ -2.43
UPK1AO00322 SNORA27-201ENST00000384323 126 ntBASIC-0.11□□□□□ -2.43
UPK1AO00322 Y_RNA.551-201ENST00000384661 102 ntBASIC-0.11□□□□□ -2.43
UPK1AO00322 MIR610-201ENST00000385139 96 ntBASIC-0.11□□□□□ -2.43
UPK1AO00322 RNU6-602P-201ENST00000411155 105 ntBASIC-0.11□□□□□ -2.43
UPK1AO00322 AL512326.2-201ENST00000426359 151 ntBASIC-0.11□□□□□ -2.43
UPK1AO00322 RPS29P24-201ENST00000486345 171 ntBASIC-0.11□□□□□ -2.43
UPK1AO00322 Y_RNA.666-201ENST00000516187 112 ntBASIC-0.11□□□□□ -2.43
UPK1AO00322 RNA5SP268-201ENST00000516828 124 ntBASIC-0.11□□□□□ -2.43
UPK1AO00322 RNU6-699P-201ENST00000517081 110 ntBASIC-0.11□□□□□ -2.43
UPK1AO00322 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC-0.11□□□□□ -2.43
UPK1AO00322 MIR1273G-201ENST00000577677 100 ntBASIC-0.11□□□□□ -2.43
UPK1AO00322 AC073869.6-201ENST00000640656 341 ntBASIC-0.11□□□□□ -2.43
UPK1AO00322 SNORD114-5-201ENST00000362928 70 ntBASIC-0.12□□□□□ -2.43
UPK1AO00322 RNU4-80P-201ENST00000363200 141 ntBASIC-0.12□□□□□ -2.43
UPK1AO00322 SNORA36.1-201ENST00000363424 132 ntBASIC-0.12□□□□□ -2.43
UPK1AO00322 RNU6-1205P-201ENST00000363625 106 ntBASIC-0.12□□□□□ -2.43
UPK1AO00322 RNU6-899P-201ENST00000363947 107 ntBASIC-0.12□□□□□ -2.43
UPK1AO00322 RNU6-801P-201ENST00000364087 105 ntBASIC-0.12□□□□□ -2.43
UPK1AO00322 Y_RNA.428-201ENST00000384078 102 ntBASIC-0.12□□□□□ -2.43
UPK1AO00322 MIR644A-201ENST00000385262 94 ntBASIC-0.12□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 173.3 ms