Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 SNORD115-11-201ENST00000363616 82 ntBASIC0.03□□□□□ -2.4
AP3B1O00203 SNORD115-5-201ENST00000363633 82 ntBASIC0.03□□□□□ -2.4
AP3B1O00203 SNORD115-39-201ENST00000363694 82 ntBASIC0.03□□□□□ -2.4
AP3B1O00203 SNORD115-4-201ENST00000363810 82 ntBASIC0.03□□□□□ -2.4
AP3B1O00203 SNORD115-16-201ENST00000363887 82 ntBASIC0.03□□□□□ -2.4
AP3B1O00203 SNORD115-6-201ENST00000363942 82 ntBASIC0.03□□□□□ -2.4
AP3B1O00203 SNORD115-42-201ENST00000364273 82 ntBASIC0.03□□□□□ -2.4
AP3B1O00203 Y_RNA.269-201ENST00000364685 89 ntBASIC0.03□□□□□ -2.4
AP3B1O00203 SNORD115-15-201ENST00000364809 81 ntBASIC0.03□□□□□ -2.4
AP3B1O00203 SNORD115-1-201ENST00000364961 82 ntBASIC0.03□□□□□ -2.4
AP3B1O00203 SNORD115-26-201ENST00000365067 82 ntBASIC0.03□□□□□ -2.4
AP3B1O00203 SNORD115-10-201ENST00000365073 81 ntBASIC0.03□□□□□ -2.4
AP3B1O00203 SNORD115-43-201ENST00000365503 82 ntBASIC0.03□□□□□ -2.4
AP3B1O00203 SNORD115-36-201ENST00000365629 82 ntBASIC0.03□□□□□ -2.4
AP3B1O00203 Y_RNA.474-201ENST00000384341 102 ntBASIC0.03□□□□□ -2.4
AP3B1O00203 SNORD38B-201ENST00000384690 67 ntBASIC0.03□□□□□ -2.4
AP3B1O00203 MIR1257-201ENST00000408490 117 ntBASIC0.03□□□□□ -2.4
AP3B1O00203 Y_RNA.666-201ENST00000516187 112 ntBASIC0.03□□□□□ -2.4
AP3B1O00203 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.03□□□□□ -2.4
AP3B1O00203 MIR4514-201ENST00000581410 57 ntBASIC0.03□□□□□ -2.4
AP3B1O00203 SNORD92-201ENST00000585078 85 ntBASIC0.03□□□□□ -2.4
AP3B1O00203 SNORD115-40-201ENST00000606510 82 ntBASIC0.03□□□□□ -2.4
AP3B1O00203 Y_RNA.772-201ENST00000606692 102 ntBASIC0.03□□□□□ -2.4
AP3B1O00203 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.03□□□□□ -2.4
AP3B1O00203 SNORD38B-202ENST00000625943 69 ntBASIC0.03□□□□□ -2.4
AP3B1O00203 MIR4272-201ENST00000635924 64 ntBASIC0.03□□□□□ -2.4
AP3B1O00203 RNU6-1309P-201ENST00000363305 108 ntBASIC0.02□□□□□ -2.41
AP3B1O00203 Y_RNA.476-201ENST00000384347 108 ntBASIC0.02□□□□□ -2.41
AP3B1O00203 RNU6-308P-201ENST00000390957 107 ntBASIC0.02□□□□□ -2.41
AP3B1O00203 FCF1P9-201ENST00000412546 282 ntBASIC0.02□□□□□ -2.41
AP3B1O00203 NDUFAF4P4-201ENST00000454883 502 ntBASIC0.02□□□□□ -2.41
AP3B1O00203 AC007751.1-201ENST00000529260 376 ntBASIC0.02□□□□□ -2.41
AP3B1O00203 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.02□□□□□ -2.41
AP3B1O00203 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC0.02□□□□□ -2.41
AP3B1O00203 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC0.02□□□□□ -2.41
AP3B1O00203 MIR8055-201ENST00000610739 97 ntBASIC0.02□□□□□ -2.41
AP3B1O00203 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.02□□□□□ -2.41
AP3B1O00203 Z97988.1-201ENST00000637697 135 ntBASIC0.02□□□□□ -2.41
AP3B1O00203 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.02□□□□□ -2.41
AP3B1O00203 SNORA36.1-201ENST00000363424 132 ntBASIC0.01□□□□□ -2.41
AP3B1O00203 Y_RNA.286-201ENST00000364813 102 ntBASIC0.01□□□□□ -2.41
AP3B1O00203 Y_RNA.383-201ENST00000383855 97 ntBASIC0.01□□□□□ -2.41
AP3B1O00203 Y_RNA.458-201ENST00000384240 102 ntBASIC0.01□□□□□ -2.41
AP3B1O00203 Y_RNA.508-201ENST00000384502 114 ntBASIC0.01□□□□□ -2.41
AP3B1O00203 RNU6-21P-201ENST00000384710 107 ntBASIC0.01□□□□□ -2.41
AP3B1O00203 RNU6-876P-201ENST00000391295 104 ntBASIC0.01□□□□□ -2.41
AP3B1O00203 RNU6-1190P-201ENST00000410811 104 ntBASIC0.01□□□□□ -2.41
AP3B1O00203 RNU7-73P-201ENST00000458743 63 ntBASIC0.01□□□□□ -2.41
AP3B1O00203 RNU7-149P-201ENST00000516739 59 ntBASIC0.01□□□□□ -2.41
AP3B1O00203 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.01□□□□□ -2.41
AP3B1O00203 AC023932.2-201ENST00000603176 175 ntBASIC0.01□□□□□ -2.41
AP3B1O00203 AP000942.4-201ENST00000604811 241 ntBASIC0.01□□□□□ -2.41
AP3B1O00203 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC0.01□□□□□ -2.41
AP3B1O00203 AC133104.2-201ENST00000615272 193 ntBASIC0.01□□□□□ -2.41
AP3B1O00203 MIR6718-201ENST00000616153 80 ntBASIC0.01□□□□□ -2.41
AP3B1O00203 PVT1_3.1-201ENST00000620853 95 ntBASIC0.01□□□□□ -2.41
AP3B1O00203 AC022140.2-201ENST00000623500 188 ntBASIC0.01□□□□□ -2.41
AP3B1O00203 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0□□□□□ -2.41
AP3B1O00203 Y_RNA.143-201ENST00000363520 106 ntBASIC0□□□□□ -2.41
AP3B1O00203 RNU4-67P-201ENST00000364569 141 ntBASIC0□□□□□ -2.41
AP3B1O00203 RNA5SP117-201ENST00000365294 118 ntBASIC0□□□□□ -2.41
AP3B1O00203 SNORD116-29-201ENST00000384516 83 ntBASIC0□□□□□ -2.41
AP3B1O00203 Y_RNA.551-201ENST00000384661 102 ntBASIC0□□□□□ -2.41
AP3B1O00203 RNU6-383P-201ENST00000410864 94 ntBASIC0□□□□□ -2.41
AP3B1O00203 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0□□□□□ -2.41
AP3B1O00203 MTND1P34-201ENST00000438556 671 ntBASIC0□□□□□ -2.41
AP3B1O00203 AC112693.2-201ENST00000556538 232 ntBASIC0□□□□□ -2.41
AP3B1O00203 AC113139.1-201ENST00000605049 239 ntBASIC0□□□□□ -2.41
AP3B1O00203 AC104985.2-201ENST00000620598 500 ntBASIC0□□□□□ -2.41
AP3B1O00203 Y_RNA.259-201ENST00000364619 101 ntBASIC-0.01□□□□□ -2.41
AP3B1O00203 SNORD63-201ENST00000384262 68 ntBASIC-0.01□□□□□ -2.41
AP3B1O00203 SNORD12C-201ENST00000386307 89 ntBASIC-0.01□□□□□ -2.41
AP3B1O00203 Y_RNA.617-201ENST00000410920 90 ntBASIC-0.01□□□□□ -2.41
AP3B1O00203 RNU6-602P-201ENST00000411155 105 ntBASIC-0.01□□□□□ -2.41
AP3B1O00203 RNU6-938P-201ENST00000411285 103 ntBASIC-0.01□□□□□ -2.41
AP3B1O00203 POLR2KP2-201ENST00000438155 177 ntBASIC-0.01□□□□□ -2.41
AP3B1O00203 snoU13.2-201ENST00000459201 104 ntBASIC-0.01□□□□□ -2.41
AP3B1O00203 RNU6-1170P-201ENST00000515974 106 ntBASIC-0.01□□□□□ -2.41
AP3B1O00203 SNORA62.5-201ENST00000516634 120 ntBASIC-0.01□□□□□ -2.41
AP3B1O00203 RNU6-448P-201ENST00000517052 107 ntBASIC-0.01□□□□□ -2.41
AP3B1O00203 RN7SL793P-201ENST00000583259 296 ntBASIC-0.01□□□□□ -2.41
AP3B1O00203 AL049861.1-201ENST00000603130 150 ntBASIC-0.01□□□□□ -2.41
AP3B1O00203 DLEU2_2.2-201ENST00000615474 90 ntBASIC-0.01□□□□□ -2.41
AP3B1O00203 SNORA42.1-201ENST00000363515 137 ntBASIC-0.02□□□□□ -2.41
AP3B1O00203 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.02□□□□□ -2.41
AP3B1O00203 RNU6-1040P-201ENST00000383974 107 ntBASIC-0.02□□□□□ -2.41
AP3B1O00203 Y_RNA.496-201ENST00000384444 101 ntBASIC-0.02□□□□□ -2.41
AP3B1O00203 MIR644A-201ENST00000385262 94 ntBASIC-0.02□□□□□ -2.41
AP3B1O00203 MT-TL1-201ENST00000386347 75 ntBASIC-0.02□□□□□ -2.41
AP3B1O00203 MTCO1P5-201ENST00000433573 344 ntBASIC-0.02□□□□□ -2.41
AP3B1O00203 SEPT7P4-201ENST00000437076 306 ntBASIC-0.02□□□□□ -2.41
AP3B1O00203 AC087499.4-201ENST00000448505 178 ntBASIC-0.02□□□□□ -2.41
AP3B1O00203 FGF7P6-202ENST00000451282 293 ntBASIC-0.02□□□□□ -2.41
AP3B1O00203 AL138752.1-201ENST00000452964 351 ntBASIC-0.02□□□□□ -2.41
AP3B1O00203 AC122108.2-201ENST00000611946 526 ntBASIC-0.02□□□□□ -2.41
AP3B1O00203 AC084781.2-201ENST00000615568 161 ntBASIC-0.02□□□□□ -2.41
AP3B1O00203 RNA5SP214-201ENST00000363378 118 ntBASIC-0.03□□□□□ -2.41
AP3B1O00203 SNORD115-28-201ENST00000363931 81 ntBASIC-0.03□□□□□ -2.41
AP3B1O00203 SNORD114-9-201ENST00000364370 72 ntBASIC-0.03□□□□□ -2.41
AP3B1O00203 SNORA1.1-201ENST00000364671 133 ntBASIC-0.03□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 172.3 ms