Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 MIR4791-201ENST00000607666 84 ntBASIC0.71□□□□□ -2.3
PDLIM1O00151 RNU6-94P-201ENST00000607728 107 ntBASIC0.71□□□□□ -2.3
PDLIM1O00151 AC108706.1-201ENST00000611053 297 ntBASIC0.71□□□□□ -2.3
PDLIM1O00151 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.71□□□□□ -2.3
PDLIM1O00151 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC0.71□□□□□ -2.3
PDLIM1O00151 MIR6866-201ENST00000638146 69 ntBASIC0.71□□□□□ -2.3
PDLIM1O00151 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
PDLIM1O00151 Y_RNA.26-201ENST00000362539 101 ntBASIC0.7□□□□□ -2.3
PDLIM1O00151 RNU6-654P-201ENST00000364373 107 ntBASIC0.7□□□□□ -2.3
PDLIM1O00151 Y_RNA.276-201ENST00000364732 109 ntBASIC0.7□□□□□ -2.3
PDLIM1O00151 MIR1302-7-201ENST00000408841 72 ntBASIC0.7□□□□□ -2.3
PDLIM1O00151 RNU6-847P-201ENST00000411115 108 ntBASIC0.7□□□□□ -2.3
PDLIM1O00151 AC006461.1-201ENST00000412637 326 ntBASIC0.7□□□□□ -2.3
PDLIM1O00151 MTND5P15-201ENST00000434246 349 ntBASIC0.7□□□□□ -2.3
PDLIM1O00151 U7.7-201ENST00000459276 60 ntBASIC0.7□□□□□ -2.3
PDLIM1O00151 RPS29P1-201ENST00000465274 159 ntBASIC0.7□□□□□ -2.3
PDLIM1O00151 MIR2115-201ENST00000516657 100 ntBASIC0.7□□□□□ -2.3
PDLIM1O00151 AL356055.1-201ENST00000602528 446 ntBASIC0.7□□□□□ -2.3
PDLIM1O00151 MTND1P7-201ENST00000632801 297 ntBASIC0.7□□□□□ -2.3
PDLIM1O00151 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
PDLIM1O00151 Y_RNA.16-201ENST00000362421 102 ntBASIC0.69□□□□□ -2.3
PDLIM1O00151 Y_RNA.224-201ENST00000364308 111 ntBASIC0.69□□□□□ -2.3
PDLIM1O00151 Y_RNA.547-201ENST00000384654 119 ntBASIC0.69□□□□□ -2.3
PDLIM1O00151 MIR548O-201ENST00000408583 114 ntBASIC0.69□□□□□ -2.3
PDLIM1O00151 RNA5SP95-201ENST00000410319 137 ntBASIC0.69□□□□□ -2.3
PDLIM1O00151 RNU4-57P-201ENST00000515980 135 ntBASIC0.69□□□□□ -2.3
PDLIM1O00151 RNU7-25P-201ENST00000516544 62 ntBASIC0.69□□□□□ -2.3
PDLIM1O00151 SCARNA24.2-201ENST00000516968 130 ntBASIC0.69□□□□□ -2.3
PDLIM1O00151 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.69□□□□□ -2.3
PDLIM1O00151 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC0.69□□□□□ -2.3
PDLIM1O00151 AC006006.1-201ENST00000603082 144 ntBASIC0.69□□□□□ -2.3
PDLIM1O00151 AC243994.1-201ENST00000618627 109 ntBASIC0.69□□□□□ -2.3
PDLIM1O00151 7SK.10-201ENST00000621414 298 ntBASIC0.69□□□□□ -2.3
PDLIM1O00151 snoU18.1-201ENST00000629629 71 ntBASIC0.69□□□□□ -2.3
PDLIM1O00151 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.69□□□□□ -2.3
PDLIM1O00151 AC023934.1-201ENST00000574529 2389 ntBASIC0.68□□□□□ -2.3
PDLIM1O00151 Y_RNA.587-201ENST00000391210 103 ntBASIC0.68□□□□□ -2.3
PDLIM1O00151 AC113618.1-201ENST00000416747 285 ntBASIC0.68□□□□□ -2.3
PDLIM1O00151 AL035398.1-201ENST00000430869 322 ntBASIC0.68□□□□□ -2.3
PDLIM1O00151 Y_RNA.666-201ENST00000516187 112 ntBASIC0.68□□□□□ -2.3
PDLIM1O00151 CYP3A137P-201ENST00000562436 69 ntBASIC0.68□□□□□ -2.3
PDLIM1O00151 MIR548AO-201ENST00000579992 96 ntBASIC0.68□□□□□ -2.3
PDLIM1O00151 AC025627.3-201ENST00000582078 182 ntBASIC0.68□□□□□ -2.3
PDLIM1O00151 AL136317.1-201ENST00000612653 226 ntBASIC0.68□□□□□ -2.3
PDLIM1O00151 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.68□□□□□ -2.3
PDLIM1O00151 MIR6788-201ENST00000618842 66 ntBASIC0.68□□□□□ -2.3
PDLIM1O00151 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.67□□□□□ -2.3
PDLIM1O00151 Y_RNA.84-201ENST00000363011 104 ntBASIC0.67□□□□□ -2.3
PDLIM1O00151 Y_RNA.153-201ENST00000363615 91 ntBASIC0.67□□□□□ -2.3
PDLIM1O00151 Y_RNA.217-201ENST00000364214 105 ntBASIC0.67□□□□□ -2.3
PDLIM1O00151 MIR605-201ENST00000385078 83 ntBASIC0.67□□□□□ -2.3
PDLIM1O00151 AL731563.1-201ENST00000442202 214 ntBASIC0.67□□□□□ -2.3
PDLIM1O00151 RNU7-67P-201ENST00000459003 62 ntBASIC0.67□□□□□ -2.3
PDLIM1O00151 Y_RNA.641-201ENST00000459414 105 ntBASIC0.67□□□□□ -2.3
PDLIM1O00151 Y_RNA.701-201ENST00000516812 110 ntBASIC0.67□□□□□ -2.3
PDLIM1O00151 RNU6-1137P-201ENST00000517073 99 ntBASIC0.67□□□□□ -2.3
PDLIM1O00151 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.67□□□□□ -2.3
PDLIM1O00151 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.67□□□□□ -2.3
PDLIM1O00151 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC0.67□□□□□ -2.3
PDLIM1O00151 AC044792.1-201ENST00000593294 196 ntBASIC0.67□□□□□ -2.3
PDLIM1O00151 Y_RNA.802-201ENST00000614892 130 ntBASIC0.67□□□□□ -2.3
PDLIM1O00151 Y_RNA.116-201ENST00000363292 103 ntBASIC0.66□□□□□ -2.3
PDLIM1O00151 RNU4-10P-201ENST00000364383 140 ntBASIC0.66□□□□□ -2.3
PDLIM1O00151 Y_RNA.241-201ENST00000364470 117 ntBASIC0.66□□□□□ -2.3
PDLIM1O00151 RNU6-1138P-201ENST00000365359 106 ntBASIC0.66□□□□□ -2.3
PDLIM1O00151 SNORA33.2-201ENST00000365413 134 ntBASIC0.66□□□□□ -2.3
PDLIM1O00151 RNU6-1335P-201ENST00000365426 107 ntBASIC0.66□□□□□ -2.3
PDLIM1O00151 RNU6-639P-201ENST00000384074 107 ntBASIC0.66□□□□□ -2.3
PDLIM1O00151 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.66□□□□□ -2.3
PDLIM1O00151 MIR548J-201ENST00000408833 112 ntBASIC0.66□□□□□ -2.3
PDLIM1O00151 RNU6-613P-201ENST00000410412 108 ntBASIC0.66□□□□□ -2.3
PDLIM1O00151 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.66□□□□□ -2.3
PDLIM1O00151 MTND5P22-201ENST00000458380 195 ntBASIC0.66□□□□□ -2.3
PDLIM1O00151 SERF1AP1-201ENST00000514575 187 ntBASIC0.66□□□□□ -2.3
PDLIM1O00151 RNU6-1110P-201ENST00000516462 101 ntBASIC0.66□□□□□ -2.3
PDLIM1O00151 RNU6-570P-201ENST00000517051 105 ntBASIC0.66□□□□□ -2.3
PDLIM1O00151 MIR4662B-201ENST00000579498 81 ntBASIC0.66□□□□□ -2.3
PDLIM1O00151 AL353765.1-201ENST00000605514 183 ntBASIC0.66□□□□□ -2.3
PDLIM1O00151 AL021707.8-201ENST00000609428 183 ntBASIC0.66□□□□□ -2.3
PDLIM1O00151 AL008718.3-201ENST00000610217 321 ntBASIC0.66□□□□□ -2.3
PDLIM1O00151 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.65□□□□□ -2.31
PDLIM1O00151 MIR1-1-201ENST00000362147 71 ntBASIC0.65□□□□□ -2.31
PDLIM1O00151 Y_RNA.24-201ENST00000362508 103 ntBASIC0.65□□□□□ -2.31
PDLIM1O00151 Y_RNA.486-201ENST00000384398 107 ntBASIC0.65□□□□□ -2.31
PDLIM1O00151 MIR526A2-201ENST00000390198 65 ntBASIC0.65□□□□□ -2.31
PDLIM1O00151 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.65□□□□□ -2.31
PDLIM1O00151 SNORD99-201ENST00000408612 74 ntBASIC0.65□□□□□ -2.31
PDLIM1O00151 RNU6-985P-201ENST00000410182 104 ntBASIC0.65□□□□□ -2.31
PDLIM1O00151 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.65□□□□□ -2.31
PDLIM1O00151 AC113410.1-201ENST00000505029 247 ntBASIC0.65□□□□□ -2.31
PDLIM1O00151 MTCO2P24-201ENST00000515611 426 ntBASIC0.65□□□□□ -2.31
PDLIM1O00151 RNU6-1338P-201ENST00000516328 91 ntBASIC0.65□□□□□ -2.31
PDLIM1O00151 MIR151B-201ENST00000584249 96 ntBASIC0.65□□□□□ -2.31
PDLIM1O00151 AP000753.3-201ENST00000604083 169 ntBASIC0.65□□□□□ -2.31
PDLIM1O00151 AC104465.1-201ENST00000611365 139 ntBASIC0.65□□□□□ -2.31
PDLIM1O00151 SNORD115-28-201ENST00000363931 81 ntBASIC0.64□□□□□ -2.31
PDLIM1O00151 SNORA8.3-201ENST00000384679 139 ntBASIC0.64□□□□□ -2.31
PDLIM1O00151 RNU2-13P-201ENST00000515909 113 ntBASIC0.64□□□□□ -2.31
PDLIM1O00151 RNU6-693P-201ENST00000516134 107 ntBASIC0.64□□□□□ -2.31
PDLIM1O00151 SNORD77.4-201ENST00000516158 81 ntBASIC0.64□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 128.5 ms