Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 AC243994.1-201ENST00000618627 109 ntBASIC0.46□□□□□ -2.34
DDX39AO00148 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.45□□□□□ -2.34
DDX39AO00148 RNU6-580P-201ENST00000365159 107 ntBASIC0.45□□□□□ -2.34
DDX39AO00148 MIR520H-201ENST00000385126 88 ntBASIC0.45□□□□□ -2.34
DDX39AO00148 MIR1302-11-201ENST00000408051 138 ntBASIC0.45□□□□□ -2.34
DDX39AO00148 MIR1302-9-201ENST00000408365 138 ntBASIC0.45□□□□□ -2.34
DDX39AO00148 MIR1302-10-201ENST00000408734 138 ntBASIC0.45□□□□□ -2.34
DDX39AO00148 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC0.45□□□□□ -2.34
DDX39AO00148 RNU6-1046P-201ENST00000516538 107 ntBASIC0.45□□□□□ -2.34
DDX39AO00148 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
DDX39AO00148 MIR1302-2-201ENST00000607096 138 ntBASIC0.45□□□□□ -2.34
DDX39AO00148 RNU6-369P-201ENST00000362515 102 ntBASIC0.44□□□□□ -2.34
DDX39AO00148 SNORD113-8-201ENST00000363497 74 ntBASIC0.44□□□□□ -2.34
DDX39AO00148 SNORD45.3-201ENST00000363836 72 ntBASIC0.44□□□□□ -2.34
DDX39AO00148 RNU6-899P-201ENST00000363947 107 ntBASIC0.44□□□□□ -2.34
DDX39AO00148 RNU6-934P-201ENST00000365154 107 ntBASIC0.44□□□□□ -2.34
DDX39AO00148 MIR193B-201ENST00000384907 83 ntBASIC0.44□□□□□ -2.34
DDX39AO00148 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.44□□□□□ -2.34
DDX39AO00148 MTND3P22-201ENST00000510932 243 ntBASIC0.44□□□□□ -2.34
DDX39AO00148 Y_RNA.702-201ENST00000516843 96 ntBASIC0.44□□□□□ -2.34
DDX39AO00148 uc_338.4-201ENST00000616635 176 ntBASIC0.44□□□□□ -2.34
DDX39AO00148 RNU4-45P-201ENST00000365469 141 ntBASIC0.43□□□□□ -2.34
DDX39AO00148 RNU6-308P-201ENST00000390957 107 ntBASIC0.43□□□□□ -2.34
DDX39AO00148 snoU13.21-201ENST00000459368 105 ntBASIC0.43□□□□□ -2.34
DDX39AO00148 AC107297.1-201ENST00000459991 176 ntBASIC0.43□□□□□ -2.34
DDX39AO00148 RNU7-25P-201ENST00000516544 62 ntBASIC0.43□□□□□ -2.34
DDX39AO00148 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.43□□□□□ -2.34
DDX39AO00148 MIR548S-201ENST00000581352 82 ntBASIC0.43□□□□□ -2.34
DDX39AO00148 MIR4795-201ENST00000584182 89 ntBASIC0.43□□□□□ -2.34
DDX39AO00148 uc_338.22-201ENST00000622722 187 ntBASIC0.43□□□□□ -2.34
DDX39AO00148 RNU4-73P-201ENST00000363164 141 ntBASIC0.42□□□□□ -2.34
DDX39AO00148 Y_RNA.136-201ENST00000363444 102 ntBASIC0.42□□□□□ -2.34
DDX39AO00148 RNU6-102P-201ENST00000384485 104 ntBASIC0.42□□□□□ -2.34
DDX39AO00148 Y_RNA.547-201ENST00000384654 119 ntBASIC0.42□□□□□ -2.34
DDX39AO00148 RNU6-763P-201ENST00000390865 106 ntBASIC0.42□□□□□ -2.34
DDX39AO00148 Y_RNA.602-201ENST00000410535 92 ntBASIC0.42□□□□□ -2.34
DDX39AO00148 SNORD83.1-201ENST00000411362 77 ntBASIC0.42□□□□□ -2.34
DDX39AO00148 AC023449.1-201ENST00000454464 154 ntBASIC0.42□□□□□ -2.34
DDX39AO00148 HSPE1P25-201ENST00000455484 251 ntBASIC0.42□□□□□ -2.34
DDX39AO00148 RNU6-397P-201ENST00000516226 104 ntBASIC0.42□□□□□ -2.34
DDX39AO00148 RNU6-764P-201ENST00000516396 105 ntBASIC0.42□□□□□ -2.34
DDX39AO00148 MIR4771-2-201ENST00000577758 74 ntBASIC0.42□□□□□ -2.34
DDX39AO00148 MIR4771-1-201ENST00000582617 74 ntBASIC0.42□□□□□ -2.34
DDX39AO00148 AL133255.1-201ENST00000606374 441 ntBASIC0.42□□□□□ -2.34
DDX39AO00148 MIR376A1-201ENST00000616574 68 ntBASIC0.42□□□□□ -2.34
DDX39AO00148 AC022140.2-201ENST00000623500 188 ntBASIC0.42□□□□□ -2.34
DDX39AO00148 RNU6-1205P-201ENST00000363625 106 ntBASIC0.41□□□□□ -2.34
DDX39AO00148 RNU6-144P-201ENST00000383951 107 ntBASIC0.41□□□□□ -2.34
DDX39AO00148 Y_RNA.424-201ENST00000384063 103 ntBASIC0.41□□□□□ -2.34
DDX39AO00148 RNU6-125P-201ENST00000384505 107 ntBASIC0.41□□□□□ -2.34
DDX39AO00148 MIR548O-201ENST00000408583 114 ntBASIC0.41□□□□□ -2.34
DDX39AO00148 RNU6-1170P-201ENST00000515974 106 ntBASIC0.41□□□□□ -2.34
DDX39AO00148 VTRNA1-3-201ENST00000365645 89 ntBASIC0.4□□□□□ -2.35
DDX39AO00148 Y_RNA.395-201ENST00000383945 109 ntBASIC0.4□□□□□ -2.35
DDX39AO00148 Y_RNA.445-201ENST00000384168 102 ntBASIC0.4□□□□□ -2.35
DDX39AO00148 Y_RNA.569-201ENST00000384749 103 ntBASIC0.4□□□□□ -2.35
DDX39AO00148 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC0.4□□□□□ -2.35
DDX39AO00148 SNORD115-46-201ENST00000390982 71 ntBASIC0.4□□□□□ -2.35
DDX39AO00148 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.4□□□□□ -2.35
DDX39AO00148 MTND4P19-201ENST00000446659 478 ntBASIC0.4□□□□□ -2.35
DDX39AO00148 snoU13.16-201ENST00000459350 104 ntBASIC0.4□□□□□ -2.35
DDX39AO00148 MRPS35P2-201ENST00000508242 191 ntBASIC0.4□□□□□ -2.35
DDX39AO00148 SNORA68.3-201ENST00000515906 83 ntBASIC0.4□□□□□ -2.35
DDX39AO00148 MIR1273G-201ENST00000577677 100 ntBASIC0.4□□□□□ -2.35
DDX39AO00148 MIR4801-201ENST00000582704 82 ntBASIC0.4□□□□□ -2.35
DDX39AO00148 C8orf59P2-201ENST00000603441 271 ntBASIC0.4□□□□□ -2.35
DDX39AO00148 AC124312.5-201ENST00000604451 268 ntBASIC0.4□□□□□ -2.35
DDX39AO00148 AL021707.8-201ENST00000609428 183 ntBASIC0.4□□□□□ -2.35
DDX39AO00148 MIR18A-201ENST00000362310 71 ntBASIC0.39□□□□□ -2.35
DDX39AO00148 RNU4-90P-201ENST00000362773 141 ntBASIC0.39□□□□□ -2.35
DDX39AO00148 Y_RNA.183-201ENST00000363882 113 ntBASIC0.39□□□□□ -2.35
DDX39AO00148 SNORA63.7-201ENST00000365579 123 ntBASIC0.39□□□□□ -2.35
DDX39AO00148 SNORA24-201ENST00000384096 131 ntBASIC0.39□□□□□ -2.35
DDX39AO00148 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.39□□□□□ -2.35
DDX39AO00148 RNU6-383P-201ENST00000410864 94 ntBASIC0.39□□□□□ -2.35
DDX39AO00148 AC090844.1-201ENST00000422019 156 ntBASIC0.39□□□□□ -2.35
DDX39AO00148 MTCO2P12-201ENST00000427426 682 ntBASIC0.39□□□□□ -2.35
DDX39AO00148 MTCO1P5-201ENST00000433573 344 ntBASIC0.39□□□□□ -2.35
DDX39AO00148 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.39□□□□□ -2.35
DDX39AO00148 Y_RNA.637-201ENST00000459424 114 ntBASIC0.39□□□□□ -2.35
DDX39AO00148 RNU7-149P-201ENST00000516739 59 ntBASIC0.39□□□□□ -2.35
DDX39AO00148 Y_RNA.715-201ENST00000517082 110 ntBASIC0.39□□□□□ -2.35
DDX39AO00148 RAC1P9-201ENST00000604990 392 ntBASIC0.39□□□□□ -2.35
DDX39AO00148 AC013791.1-201ENST00000616619 62 ntBASIC0.39□□□□□ -2.35
DDX39AO00148 AC134878.1-201ENST00000619901 243 ntBASIC0.39□□□□□ -2.35
DDX39AO00148 AC090574.1-201ENST00000623186 233 ntBASIC0.39□□□□□ -2.35
DDX39AO00148 SNORA63C-201ENST00000364578 129 ntBASIC0.38□□□□□ -2.35
DDX39AO00148 RNY3P14-201ENST00000384309 102 ntBASIC0.38□□□□□ -2.35
DDX39AO00148 Y_RNA.494-201ENST00000384432 111 ntBASIC0.38□□□□□ -2.35
DDX39AO00148 Y_RNA.645-201ENST00000391229 102 ntBASIC0.38□□□□□ -2.35
DDX39AO00148 RNA5SP496-201ENST00000391240 109 ntBASIC0.38□□□□□ -2.35
DDX39AO00148 RNU2-70P-201ENST00000410718 179 ntBASIC0.38□□□□□ -2.35
DDX39AO00148 AC015818.7-201ENST00000428754 109 ntBASIC0.38□□□□□ -2.35
DDX39AO00148 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC0.38□□□□□ -2.35
DDX39AO00148 AC087499.7-201ENST00000441958 109 ntBASIC0.38□□□□□ -2.35
DDX39AO00148 RNU7-62P-201ENST00000458856 62 ntBASIC0.38□□□□□ -2.35
DDX39AO00148 Y_RNA.666-201ENST00000516187 112 ntBASIC0.38□□□□□ -2.35
DDX39AO00148 RNU6-897P-201ENST00000517135 105 ntBASIC0.38□□□□□ -2.35
DDX39AO00148 MIR3612-201ENST00000579753 87 ntBASIC0.38□□□□□ -2.35
DDX39AO00148 AL049861.1-201ENST00000603130 150 ntBASIC0.38□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms