Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 AC113618.1-201ENST00000416747 285 ntBASIC0.85□□□□□ -2.27
CCDC188H7C350 AC107297.1-201ENST00000459991 176 ntBASIC0.85□□□□□ -2.27
CCDC188H7C350 AC098869.1-201ENST00000481627 292 ntBASIC0.85□□□□□ -2.27
CCDC188H7C350 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.85□□□□□ -2.27
CCDC188H7C350 RNA5SP255-201ENST00000516370 107 ntBASIC0.85□□□□□ -2.27
CCDC188H7C350 AP003733.2-201ENST00000529409 171 ntBASIC0.85□□□□□ -2.27
CCDC188H7C350 MIR5692C2-201ENST00000577959 77 ntBASIC0.85□□□□□ -2.27
CCDC188H7C350 AC006441.5-201ENST00000612680 209 ntBASIC0.85□□□□□ -2.27
CCDC188H7C350 MIR215-201ENST00000384858 110 ntBASIC0.84□□□□□ -2.27
CCDC188H7C350 RNU6-847P-201ENST00000411115 108 ntBASIC0.84□□□□□ -2.27
CCDC188H7C350 SNRPGP14-201ENST00000435400 219 ntBASIC0.84□□□□□ -2.27
CCDC188H7C350 MIR4680-201ENST00000580906 66 ntBASIC0.84□□□□□ -2.27
CCDC188H7C350 AL356055.1-201ENST00000602528 446 ntBASIC0.84□□□□□ -2.27
CCDC188H7C350 AL136317.1-201ENST00000612653 226 ntBASIC0.84□□□□□ -2.27
CCDC188H7C350 MIR6857-201ENST00000613267 93 ntBASIC0.84□□□□□ -2.27
CCDC188H7C350 uc_338.4-201ENST00000616635 176 ntBASIC0.84□□□□□ -2.27
CCDC188H7C350 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.84□□□□□ -2.27
CCDC188H7C350 RNU6-654P-201ENST00000364373 107 ntBASIC0.83□□□□□ -2.28
CCDC188H7C350 RNU6-396P-201ENST00000365369 105 ntBASIC0.83□□□□□ -2.28
CCDC188H7C350 MIR608-201ENST00000384820 100 ntBASIC0.83□□□□□ -2.28
CCDC188H7C350 RNA5SP496-201ENST00000391240 109 ntBASIC0.83□□□□□ -2.28
CCDC188H7C350 RNU7-25P-201ENST00000516544 62 ntBASIC0.83□□□□□ -2.28
CCDC188H7C350 SCARNA24.2-201ENST00000516968 130 ntBASIC0.83□□□□□ -2.28
CCDC188H7C350 AP003716.2-201ENST00000528260 108 ntBASIC0.83□□□□□ -2.28
CCDC188H7C350 MIR5000-201ENST00000577717 103 ntBASIC0.83□□□□□ -2.28
CCDC188H7C350 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC0.83□□□□□ -2.28
CCDC188H7C350 MIR4791-201ENST00000607666 84 ntBASIC0.83□□□□□ -2.28
CCDC188H7C350 AC106800.4-201ENST00000614905 153 ntBASIC0.83□□□□□ -2.28
CCDC188H7C350 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.83□□□□□ -2.28
CCDC188H7C350 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
CCDC188H7C350 Y_RNA.64-201ENST00000362845 102 ntBASIC0.82□□□□□ -2.28
CCDC188H7C350 snoU2_19.2-201ENST00000363024 80 ntBASIC0.82□□□□□ -2.28
CCDC188H7C350 Y_RNA.214-201ENST00000364201 112 ntBASIC0.82□□□□□ -2.28
CCDC188H7C350 SNORD113.3-201ENST00000364630 78 ntBASIC0.82□□□□□ -2.28
CCDC188H7C350 Y_RNA.276-201ENST00000364732 109 ntBASIC0.82□□□□□ -2.28
CCDC188H7C350 RNU6-806P-201ENST00000365147 105 ntBASIC0.82□□□□□ -2.28
CCDC188H7C350 Y_RNA.537-201ENST00000384626 109 ntBASIC0.82□□□□□ -2.28
CCDC188H7C350 MIR146A-201ENST00000385201 99 ntBASIC0.82□□□□□ -2.28
CCDC188H7C350 SNORD111-201ENST00000408139 94 ntBASIC0.82□□□□□ -2.28
CCDC188H7C350 RNA5SP95-201ENST00000410319 137 ntBASIC0.82□□□□□ -2.28
CCDC188H7C350 Y_RNA.604-201ENST00000410574 102 ntBASIC0.82□□□□□ -2.28
CCDC188H7C350 Y_RNA.637-201ENST00000459424 114 ntBASIC0.82□□□□□ -2.28
CCDC188H7C350 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.82□□□□□ -2.28
CCDC188H7C350 MIR6516-201ENST00000630554 81 ntBASIC0.82□□□□□ -2.28
CCDC188H7C350 AC023934.1-201ENST00000574529 2389 ntBASIC0.82□□□□□ -2.28
CCDC188H7C350 MIR373-201ENST00000362273 69 ntBASIC0.81□□□□□ -2.28
CCDC188H7C350 Y_RNA.241-201ENST00000364470 117 ntBASIC0.81□□□□□ -2.28
CCDC188H7C350 RNU6-713P-201ENST00000384761 107 ntBASIC0.81□□□□□ -2.28
CCDC188H7C350 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.81□□□□□ -2.28
CCDC188H7C350 AC044792.1-201ENST00000593294 196 ntBASIC0.81□□□□□ -2.28
CCDC188H7C350 AP000753.3-201ENST00000604083 169 ntBASIC0.81□□□□□ -2.28
CCDC188H7C350 Y_RNA.802-201ENST00000614892 130 ntBASIC0.81□□□□□ -2.28
CCDC188H7C350 AC243994.1-201ENST00000618627 109 ntBASIC0.81□□□□□ -2.28
CCDC188H7C350 Y_RNA.16-201ENST00000362421 102 ntBASIC0.8□□□□□ -2.28
CCDC188H7C350 Y_RNA.205-201ENST00000364128 113 ntBASIC0.8□□□□□ -2.28
CCDC188H7C350 RNU6-639P-201ENST00000384074 107 ntBASIC0.8□□□□□ -2.28
CCDC188H7C350 MIR605-201ENST00000385078 83 ntBASIC0.8□□□□□ -2.28
CCDC188H7C350 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.8□□□□□ -2.28
CCDC188H7C350 RNU7-67P-201ENST00000459003 62 ntBASIC0.8□□□□□ -2.28
CCDC188H7C350 RNU6-570P-201ENST00000517051 105 ntBASIC0.8□□□□□ -2.28
CCDC188H7C350 AC036111.3-201ENST00000526389 112 ntBASIC0.8□□□□□ -2.28
CCDC188H7C350 AC020661.2-201ENST00000560114 134 ntBASIC0.8□□□□□ -2.28
CCDC188H7C350 MIR4662B-201ENST00000579498 81 ntBASIC0.8□□□□□ -2.28
CCDC188H7C350 AC025627.3-201ENST00000582078 182 ntBASIC0.8□□□□□ -2.28
CCDC188H7C350 RN7SL793P-201ENST00000583259 296 ntBASIC0.8□□□□□ -2.28
CCDC188H7C350 AC104465.1-201ENST00000611365 139 ntBASIC0.8□□□□□ -2.28
CCDC188H7C350 AC022140.2-201ENST00000623500 188 ntBASIC0.8□□□□□ -2.28
CCDC188H7C350 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC0.8□□□□□ -2.28
CCDC188H7C350 Y_RNA.547-201ENST00000384654 119 ntBASIC0.79□□□□□ -2.28
CCDC188H7C350 Y_RNA.587-201ENST00000391210 103 ntBASIC0.79□□□□□ -2.28
CCDC188H7C350 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.79□□□□□ -2.28
CCDC188H7C350 U7.7-201ENST00000459276 60 ntBASIC0.79□□□□□ -2.28
CCDC188H7C350 RNU4-57P-201ENST00000515980 135 ntBASIC0.79□□□□□ -2.28
CCDC188H7C350 Y_RNA.666-201ENST00000516187 112 ntBASIC0.79□□□□□ -2.28
CCDC188H7C350 SNORA27.4-201ENST00000516650 95 ntBASIC0.79□□□□□ -2.28
CCDC188H7C350 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.79□□□□□ -2.28
CCDC188H7C350 MIR548AO-201ENST00000579992 96 ntBASIC0.79□□□□□ -2.28
CCDC188H7C350 MTND1P7-201ENST00000632801 297 ntBASIC0.79□□□□□ -2.28
CCDC188H7C350 MIR6866-201ENST00000638146 69 ntBASIC0.79□□□□□ -2.28
CCDC188H7C350 Y_RNA.26-201ENST00000362539 101 ntBASIC0.78□□□□□ -2.28
CCDC188H7C350 RNU4-10P-201ENST00000364383 140 ntBASIC0.78□□□□□ -2.28
CCDC188H7C350 MIR100-201ENST00000385259 80 ntBASIC0.78□□□□□ -2.28
CCDC188H7C350 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.78□□□□□ -2.28
CCDC188H7C350 RNU6-613P-201ENST00000410412 108 ntBASIC0.78□□□□□ -2.28
CCDC188H7C350 AL731563.1-201ENST00000442202 214 ntBASIC0.78□□□□□ -2.28
CCDC188H7C350 AL392103.1-201ENST00000447000 198 ntBASIC0.78□□□□□ -2.28
CCDC188H7C350 MTND5P22-201ENST00000458380 195 ntBASIC0.78□□□□□ -2.28
CCDC188H7C350 SERF1AP1-201ENST00000514575 187 ntBASIC0.78□□□□□ -2.28
CCDC188H7C350 CYP3A137P-201ENST00000562436 69 ntBASIC0.78□□□□□ -2.28
CCDC188H7C350 MIR4698-201ENST00000577795 80 ntBASIC0.78□□□□□ -2.28
CCDC188H7C350 MIR4653-201ENST00000585107 83 ntBASIC0.78□□□□□ -2.28
CCDC188H7C350 AL353765.1-201ENST00000605514 183 ntBASIC0.78□□□□□ -2.28
CCDC188H7C350 AL442644.1-201ENST00000454390 3105 ntBASIC0.77□□□□□ -2.29
CCDC188H7C350 MIR1-1-201ENST00000362147 71 ntBASIC0.77□□□□□ -2.29
CCDC188H7C350 RNU1-133P-201ENST00000364867 167 ntBASIC0.77□□□□□ -2.29
CCDC188H7C350 RNU6-1335P-201ENST00000365426 107 ntBASIC0.77□□□□□ -2.29
CCDC188H7C350 SNORA8.3-201ENST00000384679 139 ntBASIC0.77□□□□□ -2.29
CCDC188H7C350 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.77□□□□□ -2.29
CCDC188H7C350 SNORD99-201ENST00000408612 74 ntBASIC0.77□□□□□ -2.29
CCDC188H7C350 RPS26P5-201ENST00000418544 335 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 176.3 ms