Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 AL365205.2-201ENST00000594586 68 ntBASIC2.28□□□□□ -2.04
CCDC85CA6NKD9 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
CCDC85CA6NKD9 AC104465.1-201ENST00000611365 139 ntBASIC2.28□□□□□ -2.04
CCDC85CA6NKD9 MIR8074-201ENST00000615081 81 ntBASIC2.28□□□□□ -2.04
CCDC85CA6NKD9 AC009831.4-201ENST00000620744 325 ntBASIC2.28□□□□□ -2.04
CCDC85CA6NKD9 AC021753.1-201ENST00000635724 168 ntBASIC2.28□□□□□ -2.04
CCDC85CA6NKD9 RNU6-449P-201ENST00000383914 107 ntBASIC2.27□□□□□ -2.05
CCDC85CA6NKD9 SNORD38C-201ENST00000384381 69 ntBASIC2.27□□□□□ -2.05
CCDC85CA6NKD9 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
CCDC85CA6NKD9 RNU1-123P-201ENST00000458950 160 ntBASIC2.27□□□□□ -2.05
CCDC85CA6NKD9 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
CCDC85CA6NKD9 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.26□□□□□ -2.05
CCDC85CA6NKD9 Y_RNA.542-201ENST00000384641 111 ntBASIC2.26□□□□□ -2.05
CCDC85CA6NKD9 MIR518F-201ENST00000384973 87 ntBASIC2.26□□□□□ -2.05
CCDC85CA6NKD9 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
CCDC85CA6NKD9 MIR548O-201ENST00000408583 114 ntBASIC2.26□□□□□ -2.05
CCDC85CA6NKD9 MIR1267-201ENST00000408723 78 ntBASIC2.26□□□□□ -2.05
CCDC85CA6NKD9 AC003989.2-201ENST00000440224 169 ntBASIC2.26□□□□□ -2.05
CCDC85CA6NKD9 AL021397.1-201ENST00000451806 248 ntBASIC2.26□□□□□ -2.05
CCDC85CA6NKD9 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.26□□□□□ -2.05
CCDC85CA6NKD9 RNU7-200P-201ENST00000516105 62 ntBASIC2.26□□□□□ -2.05
CCDC85CA6NKD9 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.26□□□□□ -2.05
CCDC85CA6NKD9 AC015688.6-201ENST00000577737 104 ntBASIC2.26□□□□□ -2.05
CCDC85CA6NKD9 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.26□□□□□ -2.05
CCDC85CA6NKD9 AC084768.2-201ENST00000622736 221 ntBASIC2.26□□□□□ -2.05
CCDC85CA6NKD9 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
CCDC85CA6NKD9 RNU6-1130P-201ENST00000365434 107 ntBASIC2.25□□□□□ -2.05
CCDC85CA6NKD9 Y_RNA.398-201ENST00000383952 99 ntBASIC2.25□□□□□ -2.05
CCDC85CA6NKD9 RNU6-768P-201ENST00000384683 107 ntBASIC2.25□□□□□ -2.05
CCDC85CA6NKD9 AC015922.2-201ENST00000435593 184 ntBASIC2.25□□□□□ -2.05
CCDC85CA6NKD9 AC009474.2-201ENST00000451383 136 ntBASIC2.25□□□□□ -2.05
CCDC85CA6NKD9 AC092991.1-201ENST00000477176 376 ntBASIC2.25□□□□□ -2.05
CCDC85CA6NKD9 AC005336.3-201ENST00000623833 2679 ntBASIC2.24□□□□□ -2.05
CCDC85CA6NKD9 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
CCDC85CA6NKD9 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
CCDC85CA6NKD9 MIR21-201ENST00000362134 72 ntBASIC2.24□□□□□ -2.05
CCDC85CA6NKD9 RNU6-199P-201ENST00000362954 107 ntBASIC2.24□□□□□ -2.05
CCDC85CA6NKD9 RNU6-1292P-201ENST00000383856 107 ntBASIC2.24□□□□□ -2.05
CCDC85CA6NKD9 Y_RNA.506-201ENST00000384494 102 ntBASIC2.24□□□□□ -2.05
CCDC85CA6NKD9 MIR653-201ENST00000385279 96 ntBASIC2.24□□□□□ -2.05
CCDC85CA6NKD9 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
CCDC85CA6NKD9 SNORA44.1-201ENST00000517031 108 ntBASIC2.24□□□□□ -2.05
CCDC85CA6NKD9 MTND5P41-201ENST00000517498 206 ntBASIC2.24□□□□□ -2.05
CCDC85CA6NKD9 MIR4778-201ENST00000577635 80 ntBASIC2.24□□□□□ -2.05
CCDC85CA6NKD9 Y_RNA.778-201ENST00000620203 90 ntBASIC2.24□□□□□ -2.05
CCDC85CA6NKD9 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.23□□□□□ -2.05
CCDC85CA6NKD9 SNORD116-18-201ENST00000383961 92 ntBASIC2.23□□□□□ -2.05
CCDC85CA6NKD9 RNU6-746P-201ENST00000384112 109 ntBASIC2.23□□□□□ -2.05
CCDC85CA6NKD9 Y_RNA.521-201ENST00000384560 114 ntBASIC2.23□□□□□ -2.05
CCDC85CA6NKD9 Y_RNA.547-201ENST00000384654 119 ntBASIC2.23□□□□□ -2.05
CCDC85CA6NKD9 SNORA75.5-201ENST00000391291 81 ntBASIC2.23□□□□□ -2.05
CCDC85CA6NKD9 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.23□□□□□ -2.05
CCDC85CA6NKD9 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.23□□□□□ -2.05
CCDC85CA6NKD9 AC093850.1-201ENST00000454121 251 ntBASIC2.23□□□□□ -2.05
CCDC85CA6NKD9 RNU6-693P-201ENST00000516134 107 ntBASIC2.23□□□□□ -2.05
CCDC85CA6NKD9 RNU7-25P-201ENST00000516544 62 ntBASIC2.23□□□□□ -2.05
CCDC85CA6NKD9 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.23□□□□□ -2.05
CCDC85CA6NKD9 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.23□□□□□ -2.05
CCDC85CA6NKD9 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
CCDC85CA6NKD9 MIR302D-201ENST00000362275 68 ntBASIC2.22□□□□□ -2.05
CCDC85CA6NKD9 SNORA25.7-201ENST00000364375 127 ntBASIC2.22□□□□□ -2.05
CCDC85CA6NKD9 Y_RNA.354-201ENST00000365448 111 ntBASIC2.22□□□□□ -2.05
CCDC85CA6NKD9 DEFA7P-201ENST00000382676 285 ntBASIC2.22□□□□□ -2.05
CCDC85CA6NKD9 MIR526A1-201ENST00000384897 85 ntBASIC2.22□□□□□ -2.05
CCDC85CA6NKD9 MIR30A-201ENST00000385092 71 ntBASIC2.22□□□□□ -2.05
CCDC85CA6NKD9 HMGN1P33-201ENST00000432945 451 ntBASIC2.22□□□□□ -2.05
CCDC85CA6NKD9 RNU4-57P-201ENST00000515980 135 ntBASIC2.22□□□□□ -2.05
CCDC85CA6NKD9 SNORA31.11-201ENST00000516528 139 ntBASIC2.22□□□□□ -2.05
CCDC85CA6NKD9 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC2.22□□□□□ -2.05
CCDC85CA6NKD9 MIR3198-2-201ENST00000577868 80 ntBASIC2.22□□□□□ -2.05
CCDC85CA6NKD9 MIR5694-201ENST00000581190 76 ntBASIC2.22□□□□□ -2.05
CCDC85CA6NKD9 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.22□□□□□ -2.05
CCDC85CA6NKD9 SNORA2.2-201ENST00000365473 135 ntBASIC2.21□□□□□ -2.06
CCDC85CA6NKD9 Y_RNA.400-201ENST00000383963 111 ntBASIC2.21□□□□□ -2.06
CCDC85CA6NKD9 MIR513A1-201ENST00000385138 129 ntBASIC2.21□□□□□ -2.06
CCDC85CA6NKD9 MIR624-201ENST00000385217 97 ntBASIC2.21□□□□□ -2.06
CCDC85CA6NKD9 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
CCDC85CA6NKD9 AL603908.1-201ENST00000406098 201 ntBASIC2.21□□□□□ -2.06
CCDC85CA6NKD9 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.21□□□□□ -2.06
CCDC85CA6NKD9 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC2.21□□□□□ -2.06
CCDC85CA6NKD9 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC2.21□□□□□ -2.06
CCDC85CA6NKD9 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.2□□□□□ -2.06
CCDC85CA6NKD9 SNORD115-28-201ENST00000363931 81 ntBASIC2.2□□□□□ -2.06
CCDC85CA6NKD9 Y_RNA.410-201ENST00000383992 113 ntBASIC2.2□□□□□ -2.06
CCDC85CA6NKD9 MIR136-201ENST00000385207 82 ntBASIC2.2□□□□□ -2.06
CCDC85CA6NKD9 SNORA48.3-201ENST00000391081 134 ntBASIC2.2□□□□□ -2.06
CCDC85CA6NKD9 AC087499.4-201ENST00000448505 178 ntBASIC2.2□□□□□ -2.06
CCDC85CA6NKD9 RNU6-1270P-201ENST00000517128 108 ntBASIC2.2□□□□□ -2.06
CCDC85CA6NKD9 AC134878.1-201ENST00000619901 243 ntBASIC2.2□□□□□ -2.06
CCDC85CA6NKD9 IST1-227ENST00000626438 126 ntTSL 5 BASIC2.2□□□□□ -2.06
CCDC85CA6NKD9 MIR3658-201ENST00000636291 56 ntBASIC2.2□□□□□ -2.06
CCDC85CA6NKD9 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
CCDC85CA6NKD9 Y_RNA.8-201ENST00000362353 102 ntBASIC2.19□□□□□ -2.06
CCDC85CA6NKD9 SNORA1-201ENST00000384107 130 ntBASIC2.19□□□□□ -2.06
CCDC85CA6NKD9 RNU6-125P-201ENST00000384505 107 ntBASIC2.19□□□□□ -2.06
CCDC85CA6NKD9 RNA5SP181-201ENST00000410246 98 ntBASIC2.19□□□□□ -2.06
CCDC85CA6NKD9 SUMO1P3-201ENST00000439961 304 ntBASIC2.19□□□□□ -2.06
CCDC85CA6NKD9 Y_RNA.703-201ENST00000516846 111 ntBASIC2.19□□□□□ -2.06
CCDC85CA6NKD9 SUMO2P16-201ENST00000519475 264 ntBASIC2.19□□□□□ -2.06
CCDC85CA6NKD9 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms