Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 AC013791.1-201ENST00000616619 62 ntBASIC0.69□□□□□ -2.3
SMIM28A0A1B0GU29 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.69□□□□□ -2.3
SMIM28A0A1B0GU29 AC022140.2-201ENST00000623500 188 ntBASIC0.69□□□□□ -2.3
SMIM28A0A1B0GU29 Y_RNA.64-201ENST00000362845 102 ntBASIC0.68□□□□□ -2.3
SMIM28A0A1B0GU29 Y_RNA.217-201ENST00000364214 105 ntBASIC0.68□□□□□ -2.3
SMIM28A0A1B0GU29 Y_RNA.276-201ENST00000364732 109 ntBASIC0.68□□□□□ -2.3
SMIM28A0A1B0GU29 MIR100-201ENST00000385259 80 ntBASIC0.68□□□□□ -2.3
SMIM28A0A1B0GU29 Y_RNA.604-201ENST00000410574 102 ntBASIC0.68□□□□□ -2.3
SMIM28A0A1B0GU29 AC006461.1-201ENST00000412637 326 ntBASIC0.68□□□□□ -2.3
SMIM28A0A1B0GU29 MTND5P15-201ENST00000434246 349 ntBASIC0.68□□□□□ -2.3
SMIM28A0A1B0GU29 Y_RNA.641-201ENST00000459414 105 ntBASIC0.68□□□□□ -2.3
SMIM28A0A1B0GU29 RNU2-31P-201ENST00000516954 155 ntBASIC0.68□□□□□ -2.3
SMIM28A0A1B0GU29 AL355297.3-201ENST00000604082 446 ntBASIC0.68□□□□□ -2.3
SMIM28A0A1B0GU29 SNORA25.1-201ENST00000362326 128 ntBASIC0.67□□□□□ -2.3
SMIM28A0A1B0GU29 RNU6-770P-201ENST00000363929 105 ntBASIC0.67□□□□□ -2.3
SMIM28A0A1B0GU29 RNU4-10P-201ENST00000364383 140 ntBASIC0.67□□□□□ -2.3
SMIM28A0A1B0GU29 MIR598-201ENST00000384868 97 ntBASIC0.67□□□□□ -2.3
SMIM28A0A1B0GU29 MIR146A-201ENST00000385201 99 ntBASIC0.67□□□□□ -2.3
SMIM28A0A1B0GU29 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.67□□□□□ -2.3
SMIM28A0A1B0GU29 PSMC1P5-201ENST00000512850 177 ntBASIC0.67□□□□□ -2.3
SMIM28A0A1B0GU29 RNY3P15-201ENST00000516297 97 ntBASIC0.67□□□□□ -2.3
SMIM28A0A1B0GU29 RNU7-149P-201ENST00000516739 59 ntBASIC0.67□□□□□ -2.3
SMIM28A0A1B0GU29 AC012433.1-201ENST00000588916 398 ntBASIC0.67□□□□□ -2.3
SMIM28A0A1B0GU29 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.67□□□□□ -2.3
SMIM28A0A1B0GU29 AL049861.1-201ENST00000603130 150 ntBASIC0.67□□□□□ -2.3
SMIM28A0A1B0GU29 PVT1_3.1-201ENST00000620853 95 ntBASIC0.67□□□□□ -2.3
SMIM28A0A1B0GU29 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.66□□□□□ -2.3
SMIM28A0A1B0GU29 AC023934.1-201ENST00000574529 2389 ntBASIC0.66□□□□□ -2.3
SMIM28A0A1B0GU29 MIR608-201ENST00000384820 100 ntBASIC0.66□□□□□ -2.3
SMIM28A0A1B0GU29 MIR548O-201ENST00000408583 114 ntBASIC0.66□□□□□ -2.3
SMIM28A0A1B0GU29 MTCYBP6-201ENST00000441810 138 ntBASIC0.66□□□□□ -2.3
SMIM28A0A1B0GU29 RNU2-13P-201ENST00000515909 113 ntBASIC0.66□□□□□ -2.3
SMIM28A0A1B0GU29 AC007751.1-201ENST00000529260 376 ntBASIC0.66□□□□□ -2.3
SMIM28A0A1B0GU29 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.66□□□□□ -2.3
SMIM28A0A1B0GU29 AP003733.2-201ENST00000529409 171 ntBASIC0.66□□□□□ -2.3
SMIM28A0A1B0GU29 MIR5692C2-201ENST00000577959 77 ntBASIC0.66□□□□□ -2.3
SMIM28A0A1B0GU29 AL512605.2-201ENST00000592972 256 ntBASIC0.66□□□□□ -2.3
SMIM28A0A1B0GU29 MIR4791-201ENST00000607666 84 ntBASIC0.66□□□□□ -2.3
SMIM28A0A1B0GU29 MIR6513-201ENST00000621188 64 ntBASIC0.66□□□□□ -2.3
SMIM28A0A1B0GU29 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC0.66□□□□□ -2.3
SMIM28A0A1B0GU29 MTND1P7-201ENST00000632801 297 ntBASIC0.66□□□□□ -2.3
SMIM28A0A1B0GU29 SNORA51.10-201ENST00000384418 136 ntBASIC0.65□□□□□ -2.31
SMIM28A0A1B0GU29 Y_RNA.494-201ENST00000384432 111 ntBASIC0.65□□□□□ -2.31
SMIM28A0A1B0GU29 Y_RNA.547-201ENST00000384654 119 ntBASIC0.65□□□□□ -2.31
SMIM28A0A1B0GU29 RNU6-613P-201ENST00000410412 108 ntBASIC0.65□□□□□ -2.31
SMIM28A0A1B0GU29 FABP5P4-201ENST00000437203 171 ntBASIC0.65□□□□□ -2.31
SMIM28A0A1B0GU29 uc_338.4-201ENST00000616635 176 ntBASIC0.65□□□□□ -2.31
SMIM28A0A1B0GU29 HSBP1P2-201ENST00000299671 229 ntBASIC0.64□□□□□ -2.31
SMIM28A0A1B0GU29 MIR367-201ENST00000362299 68 ntBASIC0.64□□□□□ -2.31
SMIM28A0A1B0GU29 Y_RNA.84-201ENST00000363011 104 ntBASIC0.64□□□□□ -2.31
SMIM28A0A1B0GU29 RNU6-797P-201ENST00000363101 109 ntBASIC0.64□□□□□ -2.31
SMIM28A0A1B0GU29 SNORD45.3-201ENST00000363836 72 ntBASIC0.64□□□□□ -2.31
SMIM28A0A1B0GU29 RNU6-326P-201ENST00000365480 107 ntBASIC0.64□□□□□ -2.31
SMIM28A0A1B0GU29 RNU6-144P-201ENST00000383951 107 ntBASIC0.64□□□□□ -2.31
SMIM28A0A1B0GU29 Y_RNA.572-201ENST00000384757 98 ntBASIC0.64□□□□□ -2.31
SMIM28A0A1B0GU29 SNORD89-201ENST00000390981 114 ntBASIC0.64□□□□□ -2.31
SMIM28A0A1B0GU29 Y_RNA.666-201ENST00000516187 112 ntBASIC0.64□□□□□ -2.31
SMIM28A0A1B0GU29 RNU6-1153P-201ENST00000516760 105 ntBASIC0.64□□□□□ -2.31
SMIM28A0A1B0GU29 RNU11-2P-201ENST00000516898 142 ntBASIC0.64□□□□□ -2.31
SMIM28A0A1B0GU29 AL356055.1-201ENST00000602528 446 ntBASIC0.64□□□□□ -2.31
SMIM28A0A1B0GU29 AL353765.1-201ENST00000605514 183 ntBASIC0.64□□□□□ -2.31
SMIM28A0A1B0GU29 RNA5SP499-201ENST00000363982 119 ntBASIC0.63□□□□□ -2.31
SMIM28A0A1B0GU29 Y_RNA.370-201ENST00000365589 108 ntBASIC0.63□□□□□ -2.31
SMIM28A0A1B0GU29 RNU6-514P-201ENST00000384208 107 ntBASIC0.63□□□□□ -2.31
SMIM28A0A1B0GU29 SNORA2B-201ENST00000384583 137 ntBASIC0.63□□□□□ -2.31
SMIM28A0A1B0GU29 Y_RNA.537-201ENST00000384626 109 ntBASIC0.63□□□□□ -2.31
SMIM28A0A1B0GU29 MIR548A2-201ENST00000384956 97 ntBASIC0.63□□□□□ -2.31
SMIM28A0A1B0GU29 SNORA53-201ENST00000391141 249 ntBASIC0.63□□□□□ -2.31
SMIM28A0A1B0GU29 RPS26P5-201ENST00000418544 335 ntBASIC0.63□□□□□ -2.31
SMIM28A0A1B0GU29 AC090844.1-201ENST00000422019 156 ntBASIC0.63□□□□□ -2.31
SMIM28A0A1B0GU29 snoU13.21-201ENST00000459368 105 ntBASIC0.63□□□□□ -2.31
SMIM28A0A1B0GU29 SNORD77.4-201ENST00000516158 81 ntBASIC0.63□□□□□ -2.31
SMIM28A0A1B0GU29 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.63□□□□□ -2.31
SMIM28A0A1B0GU29 7SK.10-201ENST00000621414 298 ntBASIC0.63□□□□□ -2.31
SMIM28A0A1B0GU29 snoU18.1-201ENST00000629629 71 ntBASIC0.63□□□□□ -2.31
SMIM28A0A1B0GU29 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.62□□□□□ -2.31
SMIM28A0A1B0GU29 RNU6-369P-201ENST00000362515 102 ntBASIC0.62□□□□□ -2.31
SMIM28A0A1B0GU29 SNORD113.3-201ENST00000364630 78 ntBASIC0.62□□□□□ -2.31
SMIM28A0A1B0GU29 Y_RNA.293-201ENST00000364908 93 ntBASIC0.62□□□□□ -2.31
SMIM28A0A1B0GU29 RNU6-1138P-201ENST00000365359 106 ntBASIC0.62□□□□□ -2.31
SMIM28A0A1B0GU29 SNORA33.2-201ENST00000365413 134 ntBASIC0.62□□□□□ -2.31
SMIM28A0A1B0GU29 AL606490.4-201ENST00000423117 127 ntBASIC0.62□□□□□ -2.31
SMIM28A0A1B0GU29 AC005534.2-201ENST00000431047 433 ntBASIC0.62□□□□□ -2.31
SMIM28A0A1B0GU29 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.62□□□□□ -2.31
SMIM28A0A1B0GU29 SNORA27.4-201ENST00000516650 95 ntBASIC0.62□□□□□ -2.31
SMIM28A0A1B0GU29 MIR4724-201ENST00000579485 89 ntBASIC0.62□□□□□ -2.31
SMIM28A0A1B0GU29 AC243994.1-201ENST00000618627 109 ntBASIC0.62□□□□□ -2.31
SMIM28A0A1B0GU29 UBE2WP1-201ENST00000362030 340 ntBASIC0.61□□□□□ -2.31
SMIM28A0A1B0GU29 Y_RNA.14-201ENST00000362415 103 ntBASIC0.61□□□□□ -2.31
SMIM28A0A1B0GU29 RNA5SP347-201ENST00000362445 119 ntBASIC0.61□□□□□ -2.31
SMIM28A0A1B0GU29 Y_RNA.486-201ENST00000384398 107 ntBASIC0.61□□□□□ -2.31
SMIM28A0A1B0GU29 RNU6-125P-201ENST00000384505 107 ntBASIC0.61□□□□□ -2.31
SMIM28A0A1B0GU29 MIR518F-201ENST00000384973 87 ntBASIC0.61□□□□□ -2.31
SMIM28A0A1B0GU29 RNA5SP496-201ENST00000391240 109 ntBASIC0.61□□□□□ -2.31
SMIM28A0A1B0GU29 MIR936-201ENST00000401264 98 ntBASIC0.61□□□□□ -2.31
SMIM28A0A1B0GU29 SNORD111-201ENST00000408139 94 ntBASIC0.61□□□□□ -2.31
SMIM28A0A1B0GU29 SNORD99-201ENST00000408612 74 ntBASIC0.61□□□□□ -2.31
SMIM28A0A1B0GU29 RNU6-994P-201ENST00000410507 111 ntBASIC0.61□□□□□ -2.31
SMIM28A0A1B0GU29 RNU6-938P-201ENST00000411285 103 ntBASIC0.61□□□□□ -2.31
SMIM28A0A1B0GU29 AC092628.1-201ENST00000436250 252 ntBASIC0.61□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 131.6 ms