Protein–RNA interactions for Protein: A0A0B4J263

TRAV39, T-cell receptor alpha variable 39 (Fragment), humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39A0A0B4J263 MRPS35P2-201ENST00000508242 191 ntBASIC0.32□□□□□ -2.36
TRAV39A0A0B4J263 RNU6-1170P-201ENST00000515974 106 ntBASIC0.32□□□□□ -2.36
TRAV39A0A0B4J263 Y_RNA.666-201ENST00000516187 112 ntBASIC0.32□□□□□ -2.36
TRAV39A0A0B4J263 RNU6-958P-201ENST00000516995 106 ntBASIC0.32□□□□□ -2.36
TRAV39A0A0B4J263 MIR3612-201ENST00000579753 87 ntBASIC0.32□□□□□ -2.36
TRAV39A0A0B4J263 MIR4804-201ENST00000581683 73 ntBASIC0.32□□□□□ -2.36
TRAV39A0A0B4J263 MIR4264-201ENST00000583520 66 ntBASIC0.32□□□□□ -2.36
TRAV39A0A0B4J263 AC020891.4-201ENST00000605745 93 ntBASIC0.32□□□□□ -2.36
TRAV39A0A0B4J263 MIR6515-201ENST00000619843 57 ntBASIC0.32□□□□□ -2.36
TRAV39A0A0B4J263 AC243829.3-201ENST00000622177 108 ntBASIC0.32□□□□□ -2.36
TRAV39A0A0B4J263 AC112487.2-201ENST00000637950 304 ntBASIC0.32□□□□□ -2.36
TRAV39A0A0B4J263 MIR18A-201ENST00000362310 71 ntBASIC0.31□□□□□ -2.36
TRAV39A0A0B4J263 Y_RNA.424-201ENST00000384063 103 ntBASIC0.31□□□□□ -2.36
TRAV39A0A0B4J263 RNU6-102P-201ENST00000384485 104 ntBASIC0.31□□□□□ -2.36
TRAV39A0A0B4J263 RNU6-1009P-201ENST00000390996 107 ntBASIC0.31□□□□□ -2.36
TRAV39A0A0B4J263 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.31□□□□□ -2.36
TRAV39A0A0B4J263 snoU13.16-201ENST00000459350 104 ntBASIC0.31□□□□□ -2.36
TRAV39A0A0B4J263 FGF7P4-201ENST00000509595 295 ntBASIC0.31□□□□□ -2.36
TRAV39A0A0B4J263 RN7SKP12-201ENST00000516275 143 ntBASIC0.31□□□□□ -2.36
TRAV39A0A0B4J263 RNU6-764P-201ENST00000516396 105 ntBASIC0.31□□□□□ -2.36
TRAV39A0A0B4J263 MIR4676-201ENST00000583078 72 ntBASIC0.31□□□□□ -2.36
TRAV39A0A0B4J263 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.31□□□□□ -2.36
TRAV39A0A0B4J263 MIR376A1-201ENST00000616574 68 ntBASIC0.31□□□□□ -2.36
TRAV39A0A0B4J263 AC022140.2-201ENST00000623500 188 ntBASIC0.31□□□□□ -2.36
TRAV39A0A0B4J263 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.31□□□□□ -2.36
TRAV39A0A0B4J263 Y_RNA.354-201ENST00000365448 111 ntBASIC0.3□□□□□ -2.36
TRAV39A0A0B4J263 MIR613-201ENST00000385248 95 ntBASIC0.3□□□□□ -2.36
TRAV39A0A0B4J263 RNU6-679P-201ENST00000391003 106 ntBASIC0.3□□□□□ -2.36
TRAV39A0A0B4J263 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.3□□□□□ -2.36
TRAV39A0A0B4J263 RNU6-496P-201ENST00000516145 99 ntBASIC0.3□□□□□ -2.36
TRAV39A0A0B4J263 AC243829.6-201ENST00000612652 106 ntBASIC0.3□□□□□ -2.36
TRAV39A0A0B4J263 uc_338.6-201ENST00000613544 171 ntBASIC0.3□□□□□ -2.36
TRAV39A0A0B4J263 AC010332.2-201ENST00000613083 1904 ntBASIC0.29□□□□□ -2.36
TRAV39A0A0B4J263 Y_RNA.14-201ENST00000362415 103 ntBASIC0.29□□□□□ -2.36
TRAV39A0A0B4J263 Y_RNA.355-201ENST00000365462 98 ntBASIC0.29□□□□□ -2.36
TRAV39A0A0B4J263 AC091959.1-201ENST00000495857 238 ntBASIC0.29□□□□□ -2.36
TRAV39A0A0B4J263 Y_RNA.673-201ENST00000516306 88 ntBASIC0.29□□□□□ -2.36
TRAV39A0A0B4J263 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.29□□□□□ -2.36
TRAV39A0A0B4J263 Y_RNA.197-201ENST00000364004 102 ntBASIC0.28□□□□□ -2.36
TRAV39A0A0B4J263 RNY1-201ENST00000364228 113 ntBASIC0.28□□□□□ -2.36
TRAV39A0A0B4J263 Y_RNA.263-201ENST00000364659 114 ntBASIC0.28□□□□□ -2.36
TRAV39A0A0B4J263 VTRNA1-3-201ENST00000365645 89 ntBASIC0.28□□□□□ -2.36
TRAV39A0A0B4J263 RNU6-144P-201ENST00000383951 107 ntBASIC0.28□□□□□ -2.36
TRAV39A0A0B4J263 Y_RNA.569-201ENST00000384749 103 ntBASIC0.28□□□□□ -2.36
TRAV39A0A0B4J263 AL355297.3-201ENST00000604082 446 ntBASIC0.28□□□□□ -2.36
TRAV39A0A0B4J263 AC124312.5-201ENST00000604451 268 ntBASIC0.28□□□□□ -2.36
TRAV39A0A0B4J263 MIRLET7D-201ENST00000362263 87 ntBASIC0.27□□□□□ -2.37
TRAV39A0A0B4J263 MIR367-201ENST00000362299 68 ntBASIC0.27□□□□□ -2.37
TRAV39A0A0B4J263 SNORD115-34-201ENST00000362441 82 ntBASIC0.27□□□□□ -2.37
TRAV39A0A0B4J263 SNORD115-12-201ENST00000362583 82 ntBASIC0.27□□□□□ -2.37
TRAV39A0A0B4J263 SNORD115-29-201ENST00000362834 82 ntBASIC0.27□□□□□ -2.37
TRAV39A0A0B4J263 SNORD115-9-201ENST00000362912 82 ntBASIC0.27□□□□□ -2.37
TRAV39A0A0B4J263 SNORD115-21-201ENST00000362963 81 ntBASIC0.27□□□□□ -2.37
TRAV39A0A0B4J263 SNORD115-14-201ENST00000363090 81 ntBASIC0.27□□□□□ -2.37
TRAV39A0A0B4J263 SNORD115-13-201ENST00000363358 82 ntBASIC0.27□□□□□ -2.37
TRAV39A0A0B4J263 SNORD114-23-201ENST00000363536 72 ntBASIC0.27□□□□□ -2.37
TRAV39A0A0B4J263 SNORD115-41-201ENST00000363608 82 ntBASIC0.27□□□□□ -2.37
TRAV39A0A0B4J263 SNORD115-11-201ENST00000363616 82 ntBASIC0.27□□□□□ -2.37
TRAV39A0A0B4J263 SNORD115-5-201ENST00000363633 82 ntBASIC0.27□□□□□ -2.37
TRAV39A0A0B4J263 SNORD115-39-201ENST00000363694 82 ntBASIC0.27□□□□□ -2.37
TRAV39A0A0B4J263 SNORD115-4-201ENST00000363810 82 ntBASIC0.27□□□□□ -2.37
TRAV39A0A0B4J263 SNORD115-16-201ENST00000363887 82 ntBASIC0.27□□□□□ -2.37
TRAV39A0A0B4J263 SNORD115-6-201ENST00000363942 82 ntBASIC0.27□□□□□ -2.37
TRAV39A0A0B4J263 Y_RNA.222-201ENST00000364264 102 ntBASIC0.27□□□□□ -2.37
TRAV39A0A0B4J263 SNORD115-42-201ENST00000364273 82 ntBASIC0.27□□□□□ -2.37
TRAV39A0A0B4J263 SNORD115-15-201ENST00000364809 81 ntBASIC0.27□□□□□ -2.37
TRAV39A0A0B4J263 Y_RNA.293-201ENST00000364908 93 ntBASIC0.27□□□□□ -2.37
TRAV39A0A0B4J263 SNORD115-1-201ENST00000364961 82 ntBASIC0.27□□□□□ -2.37
TRAV39A0A0B4J263 SNORD115-26-201ENST00000365067 82 ntBASIC0.27□□□□□ -2.37
TRAV39A0A0B4J263 SNORD115-10-201ENST00000365073 81 ntBASIC0.27□□□□□ -2.37
TRAV39A0A0B4J263 SNORD115-43-201ENST00000365503 82 ntBASIC0.27□□□□□ -2.37
TRAV39A0A0B4J263 SNORD115-36-201ENST00000365629 82 ntBASIC0.27□□□□□ -2.37
TRAV39A0A0B4J263 SNORD38B-201ENST00000384690 67 ntBASIC0.27□□□□□ -2.37
TRAV39A0A0B4J263 RNU6-913P-201ENST00000390913 95 ntBASIC0.27□□□□□ -2.37
TRAV39A0A0B4J263 MIR936-201ENST00000401264 98 ntBASIC0.27□□□□□ -2.37
TRAV39A0A0B4J263 MIR1302-11-201ENST00000408051 138 ntBASIC0.27□□□□□ -2.37
TRAV39A0A0B4J263 MIR1302-9-201ENST00000408365 138 ntBASIC0.27□□□□□ -2.37
TRAV39A0A0B4J263 MIR1302-10-201ENST00000408734 138 ntBASIC0.27□□□□□ -2.37
TRAV39A0A0B4J263 BTF3P11-201ENST00000426582 477 ntBASIC0.27□□□□□ -2.37
TRAV39A0A0B4J263 HMGN1P33-201ENST00000432945 451 ntBASIC0.27□□□□□ -2.37
TRAV39A0A0B4J263 MTCO1P5-201ENST00000433573 344 ntBASIC0.27□□□□□ -2.37
TRAV39A0A0B4J263 HSPE1P25-201ENST00000455484 251 ntBASIC0.27□□□□□ -2.37
TRAV39A0A0B4J263 RNU7-56P-201ENST00000458744 62 ntBASIC0.27□□□□□ -2.37
TRAV39A0A0B4J263 Y_RNA.637-201ENST00000459424 114 ntBASIC0.27□□□□□ -2.37
TRAV39A0A0B4J263 AC082651.2-201ENST00000496833 166 ntBASIC0.27□□□□□ -2.37
TRAV39A0A0B4J263 SNORA18.4-201ENST00000516440 124 ntBASIC0.27□□□□□ -2.37
TRAV39A0A0B4J263 AC007751.1-201ENST00000529260 376 ntBASIC0.27□□□□□ -2.37
TRAV39A0A0B4J263 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.27□□□□□ -2.37
TRAV39A0A0B4J263 MIR4795-201ENST00000584182 89 ntBASIC0.27□□□□□ -2.37
TRAV39A0A0B4J263 SNORD115-40-201ENST00000606510 82 ntBASIC0.27□□□□□ -2.37
TRAV39A0A0B4J263 MIR1302-2-201ENST00000607096 138 ntBASIC0.27□□□□□ -2.37
TRAV39A0A0B4J263 AC122108.2-201ENST00000611946 526 ntBASIC0.27□□□□□ -2.37
TRAV39A0A0B4J263 AC013791.1-201ENST00000616619 62 ntBASIC0.27□□□□□ -2.37
TRAV39A0A0B4J263 MIR6740-201ENST00000618268 113 ntBASIC0.27□□□□□ -2.37
TRAV39A0A0B4J263 AC092634.7-201ENST00000621022 103 ntBASIC0.27□□□□□ -2.37
TRAV39A0A0B4J263 SNORD38B-202ENST00000625943 69 ntBASIC0.27□□□□□ -2.37
TRAV39A0A0B4J263 RNU4-90P-201ENST00000362773 141 ntBASIC0.26□□□□□ -2.37
TRAV39A0A0B4J263 Y_RNA.118-201ENST00000363300 101 ntBASIC0.26□□□□□ -2.37
TRAV39A0A0B4J263 Y_RNA.136-201ENST00000363444 102 ntBASIC0.26□□□□□ -2.37
TRAV39A0A0B4J263 SNORD115-28-201ENST00000363931 81 ntBASIC0.26□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 174.8 ms