Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 MIR3915-201ENST00000578518 97 ntBASIC-0.92□□□□□ -2.56
TRAV5A0A0B4J249 AC018638.8-201ENST00000588755 281 ntBASIC-0.92□□□□□ -2.56
TRAV5A0A0B4J249 AP001330.5-201ENST00000607176 411 ntBASIC-0.92□□□□□ -2.56
TRAV5A0A0B4J249 Y_RNA.101-201ENST00000363154 102 ntBASIC-0.93□□□□□ -2.56
TRAV5A0A0B4J249 Y_RNA.231-201ENST00000364358 102 ntBASIC-0.93□□□□□ -2.56
TRAV5A0A0B4J249 SNORA1-201ENST00000384107 130 ntBASIC-0.93□□□□□ -2.56
TRAV5A0A0B4J249 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.93□□□□□ -2.56
TRAV5A0A0B4J249 SNORD12B-201ENST00000410433 91 ntBASIC-0.93□□□□□ -2.56
TRAV5A0A0B4J249 RNU7-116P-201ENST00000516940 62 ntBASIC-0.93□□□□□ -2.56
TRAV5A0A0B4J249 AP003072.1-201ENST00000531740 145 ntBASIC-0.93□□□□□ -2.56
TRAV5A0A0B4J249 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.93□□□□□ -2.56
TRAV5A0A0B4J249 AP000942.4-201ENST00000604811 241 ntBASIC-0.93□□□□□ -2.56
TRAV5A0A0B4J249 AC105081.1-201ENST00000617727 106 ntBASIC-0.93□□□□□ -2.56
TRAV5A0A0B4J249 Y_RNA.49-201ENST00000362714 112 ntBASIC-0.94□□□□□ -2.56
TRAV5A0A0B4J249 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.94□□□□□ -2.56
TRAV5A0A0B4J249 MIR635-201ENST00000384830 98 ntBASIC-0.94□□□□□ -2.56
TRAV5A0A0B4J249 SNORA26.8-201ENST00000391306 124 ntBASIC-0.94□□□□□ -2.56
TRAV5A0A0B4J249 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC-0.94□□□□□ -2.56
TRAV5A0A0B4J249 MIR4491-201ENST00000581087 68 ntBASIC-0.94□□□□□ -2.56
TRAV5A0A0B4J249 RNU6-89P-201ENST00000606519 100 ntBASIC-0.94□□□□□ -2.56
TRAV5A0A0B4J249 RNU6-1059P-201ENST00000363752 98 ntBASIC-0.95□□□□□ -2.56
TRAV5A0A0B4J249 Y_RNA.358-201ENST00000365491 99 ntBASIC-0.95□□□□□ -2.56
TRAV5A0A0B4J249 U8.15-201ENST00000390947 134 ntBASIC-0.95□□□□□ -2.56
TRAV5A0A0B4J249 MIR1278-201ENST00000408753 81 ntBASIC-0.95□□□□□ -2.56
TRAV5A0A0B4J249 RNA5SP237-201ENST00000410414 113 ntBASIC-0.95□□□□□ -2.56
TRAV5A0A0B4J249 RNU6-1190P-201ENST00000410811 104 ntBASIC-0.95□□□□□ -2.56
TRAV5A0A0B4J249 MTND3P21-201ENST00000433774 331 ntBASIC-0.95□□□□□ -2.56
TRAV5A0A0B4J249 RNU6-437P-201ENST00000459408 95 ntBASIC-0.95□□□□□ -2.56
TRAV5A0A0B4J249 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.95□□□□□ -2.56
TRAV5A0A0B4J249 AC024405.2-202ENST00000532731 184 ntBASIC-0.95□□□□□ -2.56
TRAV5A0A0B4J249 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC-0.95□□□□□ -2.56
TRAV5A0A0B4J249 MIR5188-201ENST00000583467 113 ntBASIC-0.95□□□□□ -2.56
TRAV5A0A0B4J249 AL360085.1-201ENST00000604713 532 ntBASIC-0.95□□□□□ -2.56
TRAV5A0A0B4J249 AP001282.2-201ENST00000616149 309 ntBASIC-0.95□□□□□ -2.56
TRAV5A0A0B4J249 RNU6-961P-201ENST00000363893 105 ntBASIC-0.96□□□□□ -2.56
TRAV5A0A0B4J249 Y_RNA.242-201ENST00000364473 110 ntBASIC-0.96□□□□□ -2.56
TRAV5A0A0B4J249 RNU6-596P-201ENST00000365395 98 ntBASIC-0.96□□□□□ -2.56
TRAV5A0A0B4J249 Y_RNA.416-201ENST00000384014 113 ntBASIC-0.96□□□□□ -2.56
TRAV5A0A0B4J249 MIR548O-201ENST00000408583 114 ntBASIC-0.96□□□□□ -2.56
TRAV5A0A0B4J249 USP9YP30-201ENST00000430729 455 ntBASIC-0.96□□□□□ -2.56
TRAV5A0A0B4J249 SNORD57-201ENST00000448188 72 ntBASIC-0.96□□□□□ -2.56
TRAV5A0A0B4J249 SNORD11.1-201ENST00000459482 85 ntBASIC-0.96□□□□□ -2.56
TRAV5A0A0B4J249 AC083798.1-201ENST00000472671 131 ntBASIC-0.96□□□□□ -2.56
TRAV5A0A0B4J249 AC011352.1-201ENST00000512300 793 ntBASIC-0.96□□□□□ -2.56
TRAV5A0A0B4J249 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.96□□□□□ -2.56
TRAV5A0A0B4J249 RNU6-436P-201ENST00000516171 114 ntBASIC-0.96□□□□□ -2.56
TRAV5A0A0B4J249 RNU6-966P-201ENST00000516479 104 ntBASIC-0.96□□□□□ -2.56
TRAV5A0A0B4J249 RNU6-1007P-201ENST00000516586 107 ntBASIC-0.96□□□□□ -2.56
TRAV5A0A0B4J249 AC245884.10-201ENST00000597355 337 ntBASIC-0.96□□□□□ -2.56
TRAV5A0A0B4J249 AC124312.5-201ENST00000604451 268 ntBASIC-0.96□□□□□ -2.56
TRAV5A0A0B4J249 AC073869.9-201ENST00000641610 120 ntBASIC-0.96□□□□□ -2.56
TRAV5A0A0B4J249 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.97□□□□□ -2.56
TRAV5A0A0B4J249 RNU6-874P-201ENST00000362390 105 ntBASIC-0.97□□□□□ -2.56
TRAV5A0A0B4J249 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.97□□□□□ -2.56
TRAV5A0A0B4J249 AC096949.1-201ENST00000412047 152 ntBASIC-0.97□□□□□ -2.56
TRAV5A0A0B4J249 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC-0.97□□□□□ -2.56
TRAV5A0A0B4J249 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC-0.97□□□□□ -2.56
TRAV5A0A0B4J249 AC010424.1-201ENST00000506336 297 ntBASIC-0.97□□□□□ -2.56
TRAV5A0A0B4J249 RNU6-155P-201ENST00000516347 100 ntBASIC-0.97□□□□□ -2.56
TRAV5A0A0B4J249 RNA5SP245-201ENST00000364239 121 ntBASIC-0.98□□□□□ -2.57
TRAV5A0A0B4J249 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.98□□□□□ -2.57
TRAV5A0A0B4J249 AC108059.2-201ENST00000434626 151 ntBASIC-0.98□□□□□ -2.57
TRAV5A0A0B4J249 RPL30P15-201ENST00000457129 321 ntBASIC-0.98□□□□□ -2.57
TRAV5A0A0B4J249 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-0.98□□□□□ -2.57
TRAV5A0A0B4J249 RNU6-1194P-201ENST00000516208 104 ntBASIC-0.98□□□□□ -2.57
TRAV5A0A0B4J249 RNU6-256P-201ENST00000516747 97 ntBASIC-0.98□□□□□ -2.57
TRAV5A0A0B4J249 MIR2681-201ENST00000581814 105 ntBASIC-0.98□□□□□ -2.57
TRAV5A0A0B4J249 AL662814.1-201ENST00000617364 121 ntBASIC-0.98□□□□□ -2.57
TRAV5A0A0B4J249 Y_RNA.212-201ENST00000364177 102 ntBASIC-0.99□□□□□ -2.57
TRAV5A0A0B4J249 Y_RNA.296-201ENST00000364930 108 ntBASIC-0.99□□□□□ -2.57
TRAV5A0A0B4J249 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC-0.99□□□□□ -2.57
TRAV5A0A0B4J249 MIR5701-3-201ENST00000578890 82 ntBASIC-0.99□□□□□ -2.57
TRAV5A0A0B4J249 MIR3672-201ENST00000584290 82 ntBASIC-0.99□□□□□ -2.57
TRAV5A0A0B4J249 MIR5701-1-201ENST00000585138 82 ntBASIC-0.99□□□□□ -2.57
TRAV5A0A0B4J249 MIR4436A-201ENST00000585278 85 ntBASIC-0.99□□□□□ -2.57
TRAV5A0A0B4J249 AP003357.1-201ENST00000604497 148 ntBASIC-0.99□□□□□ -2.57
TRAV5A0A0B4J249 AC245008.1-201ENST00000608123 476 ntBASIC-0.99□□□□□ -2.57
TRAV5A0A0B4J249 MIR5701-2-201ENST00000615634 82 ntBASIC-0.99□□□□□ -2.57
TRAV5A0A0B4J249 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.99□□□□□ -2.57
TRAV5A0A0B4J249 Y_RNA.135-201ENST00000363439 95 ntBASIC-1□□□□□ -2.57
TRAV5A0A0B4J249 Y_RNA.136-201ENST00000363444 102 ntBASIC-1□□□□□ -2.57
TRAV5A0A0B4J249 U8.6-201ENST00000364939 135 ntBASIC-1□□□□□ -2.57
TRAV5A0A0B4J249 Y_RNA.341-201ENST00000365341 102 ntBASIC-1□□□□□ -2.57
TRAV5A0A0B4J249 RNU6-926P-201ENST00000384075 107 ntBASIC-1□□□□□ -2.57
TRAV5A0A0B4J249 SNORA27-201ENST00000384323 126 ntBASIC-1□□□□□ -2.57
TRAV5A0A0B4J249 SNORA40.5-201ENST00000391061 128 ntBASIC-1□□□□□ -2.57
TRAV5A0A0B4J249 Y_RNA.615-201ENST00000410769 117 ntBASIC-1□□□□□ -2.57
TRAV5A0A0B4J249 RPS29P24-201ENST00000486345 171 ntBASIC-1□□□□□ -2.57
TRAV5A0A0B4J249 Y_RNA.665-201ENST00000516177 98 ntBASIC-1□□□□□ -2.57
TRAV5A0A0B4J249 RNA5SP66-201ENST00000517178 101 ntBASIC-1□□□□□ -2.57
TRAV5A0A0B4J249 RNY1P9-201ENST00000532431 109 ntBASIC-1□□□□□ -2.57
TRAV5A0A0B4J249 MTATP6P24-201ENST00000576835 677 ntBASIC-1□□□□□ -2.57
TRAV5A0A0B4J249 MIR4528-201ENST00000577763 90 ntBASIC-1□□□□□ -2.57
TRAV5A0A0B4J249 RNU6-490P-201ENST00000362985 107 ntBASIC-1.01□□□□□ -2.57
TRAV5A0A0B4J249 SNORA63.5-201ENST00000363548 123 ntBASIC-1.01□□□□□ -2.57
TRAV5A0A0B4J249 Y_RNA.409-201ENST00000383990 98 ntBASIC-1.01□□□□□ -2.57
TRAV5A0A0B4J249 RNY1P7-201ENST00000384743 110 ntBASIC-1.01□□□□□ -2.57
TRAV5A0A0B4J249 SNORD41.1-201ENST00000391000 69 ntBASIC-1.01□□□□□ -2.57
TRAV5A0A0B4J249 SNORA3B-201ENST00000391305 131 ntBASIC-1.01□□□□□ -2.57
TRAV5A0A0B4J249 RNU6-648P-201ENST00000410190 107 ntBASIC-1.01□□□□□ -2.57
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms