Protein–RNA interactions for Protein: Q9Y5H5

PCDHA9, Protocadherin alpha-9, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9Q9Y5H5 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.17□□□□□ -2.06
PCDHA9Q9Y5H5 MIR4713-201ENST00000582691 75 ntBASIC2.17□□□□□ -2.06
PCDHA9Q9Y5H5 MIR5197-201ENST00000583721 112 ntBASIC2.17□□□□□ -2.06
PCDHA9Q9Y5H5 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.17□□□□□ -2.06
PCDHA9Q9Y5H5 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
PCDHA9Q9Y5H5 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
PCDHA9Q9Y5H5 U8.1-201ENST00000362843 134 ntBASIC2.16□□□□□ -2.06
PCDHA9Q9Y5H5 RNU6-414P-201ENST00000363705 104 ntBASIC2.16□□□□□ -2.06
PCDHA9Q9Y5H5 RNU6-203P-201ENST00000384038 104 ntBASIC2.16□□□□□ -2.06
PCDHA9Q9Y5H5 AC004965.1-201ENST00000413033 213 ntBASIC2.16□□□□□ -2.06
PCDHA9Q9Y5H5 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.16□□□□□ -2.06
PCDHA9Q9Y5H5 MTATP6P21-201ENST00000440681 189 ntBASIC2.16□□□□□ -2.06
PCDHA9Q9Y5H5 JTBP1-201ENST00000441314 247 ntBASIC2.16□□□□□ -2.06
PCDHA9Q9Y5H5 Y_RNA.692-201ENST00000516627 105 ntBASIC2.16□□□□□ -2.06
PCDHA9Q9Y5H5 RNA5SP289-201ENST00000362332 137 ntBASIC2.15□□□□□ -2.07
PCDHA9Q9Y5H5 SNORA6-201ENST00000384033 151 ntBASIC2.15□□□□□ -2.07
PCDHA9Q9Y5H5 MIR17-201ENST00000385012 84 ntBASIC2.15□□□□□ -2.07
PCDHA9Q9Y5H5 RNU6-938P-201ENST00000411285 103 ntBASIC2.15□□□□□ -2.07
PCDHA9Q9Y5H5 RN7SKP192-201ENST00000411291 327 ntBASIC2.15□□□□□ -2.07
PCDHA9Q9Y5H5 AL161935.2-201ENST00000414627 60 ntBASIC2.15□□□□□ -2.07
PCDHA9Q9Y5H5 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.15□□□□□ -2.07
PCDHA9Q9Y5H5 AP003484.1-201ENST00000530974 250 ntBASIC2.15□□□□□ -2.07
PCDHA9Q9Y5H5 AC121758.2-201ENST00000553271 193 ntBASIC2.15□□□□□ -2.07
PCDHA9Q9Y5H5 MIR4778-201ENST00000577635 80 ntBASIC2.15□□□□□ -2.07
PCDHA9Q9Y5H5 Y_RNA.757-201ENST00000578934 114 ntBASIC2.15□□□□□ -2.07
PCDHA9Q9Y5H5 AC011603.4-201ENST00000611325 277 ntBASIC2.15□□□□□ -2.07
PCDHA9Q9Y5H5 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.15□□□□□ -2.07
PCDHA9Q9Y5H5 ZNF658B-202ENST00000615961 3375 ntBASIC2.15□□□□□ -2.07
PCDHA9Q9Y5H5 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC2.15□□□□□ -2.07
PCDHA9Q9Y5H5 MIR548I2-201ENST00000408348 149 ntBASIC2.14□□□□□ -2.07
PCDHA9Q9Y5H5 RNA5SP281-201ENST00000516504 135 ntBASIC2.14□□□□□ -2.07
PCDHA9Q9Y5H5 Y_RNA.686-201ENST00000516548 134 ntBASIC2.14□□□□□ -2.07
PCDHA9Q9Y5H5 SCARNA15-202ENST00000516881 127 ntBASIC2.14□□□□□ -2.07
PCDHA9Q9Y5H5 RNU2-60P-201ENST00000517290 128 ntBASIC2.14□□□□□ -2.07
PCDHA9Q9Y5H5 MIR4299-201ENST00000577899 72 ntBASIC2.14□□□□□ -2.07
PCDHA9Q9Y5H5 MIR5002-201ENST00000584713 97 ntBASIC2.14□□□□□ -2.07
PCDHA9Q9Y5H5 MIR6852-201ENST00000621699 66 ntBASIC2.14□□□□□ -2.07
PCDHA9Q9Y5H5 AP000553.5-201ENST00000641933 54 ntBASIC2.14□□□□□ -2.07
PCDHA9Q9Y5H5 MTND5P32-201ENST00000560711 1802 ntBASIC2.14□□□□□ -2.07
PCDHA9Q9Y5H5 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
PCDHA9Q9Y5H5 SNORA40.5-201ENST00000391061 128 ntBASIC2.13□□□□□ -2.07
PCDHA9Q9Y5H5 AL627390.1-201ENST00000396055 340 ntBASIC2.13□□□□□ -2.07
PCDHA9Q9Y5H5 RNU6-62P-201ENST00000516526 102 ntBASIC2.13□□□□□ -2.07
PCDHA9Q9Y5H5 SNORD36C-201ENST00000516733 66 ntBASIC2.13□□□□□ -2.07
PCDHA9Q9Y5H5 MIR3121-201ENST00000579680 77 ntBASIC2.13□□□□□ -2.07
PCDHA9Q9Y5H5 MIR376A2-201ENST00000636782 80 ntBASIC2.13□□□□□ -2.07
PCDHA9Q9Y5H5 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
PCDHA9Q9Y5H5 SNORA1.2-201ENST00000365189 134 ntBASIC2.12□□□□□ -2.07
PCDHA9Q9Y5H5 Y_RNA.440-201ENST00000384120 114 ntBASIC2.12□□□□□ -2.07
PCDHA9Q9Y5H5 U8.17-201ENST00000391292 132 ntBASIC2.12□□□□□ -2.07
PCDHA9Q9Y5H5 RNU6-1211P-201ENST00000459179 105 ntBASIC2.12□□□□□ -2.07
PCDHA9Q9Y5H5 RNA5SP236-201ENST00000516169 116 ntBASIC2.12□□□□□ -2.07
PCDHA9Q9Y5H5 Y_RNA.690-201ENST00000516603 95 ntBASIC2.12□□□□□ -2.07
PCDHA9Q9Y5H5 RNU6-1149P-201ENST00000516810 97 ntBASIC2.12□□□□□ -2.07
PCDHA9Q9Y5H5 RNU6-971P-201ENST00000516920 106 ntBASIC2.12□□□□□ -2.07
PCDHA9Q9Y5H5 AC009831.4-201ENST00000620744 325 ntBASIC2.12□□□□□ -2.07
PCDHA9Q9Y5H5 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
PCDHA9Q9Y5H5 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
PCDHA9Q9Y5H5 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
PCDHA9Q9Y5H5 RNU6-457P-201ENST00000363999 107 ntBASIC2.11□□□□□ -2.07
PCDHA9Q9Y5H5 RNA5SP37-201ENST00000365420 130 ntBASIC2.11□□□□□ -2.07
PCDHA9Q9Y5H5 SNORA2.2-201ENST00000365473 135 ntBASIC2.11□□□□□ -2.07
PCDHA9Q9Y5H5 MIR526A1-201ENST00000384897 85 ntBASIC2.11□□□□□ -2.07
PCDHA9Q9Y5H5 MIR221-201ENST00000385135 110 ntBASIC2.11□□□□□ -2.07
PCDHA9Q9Y5H5 MIR516B2-201ENST00000385190 85 ntBASIC2.11□□□□□ -2.07
PCDHA9Q9Y5H5 AC090255.1-201ENST00000495779 349 ntBASIC2.11□□□□□ -2.07
PCDHA9Q9Y5H5 AC095038.3-201ENST00000634439 195 ntBASIC2.11□□□□□ -2.07
PCDHA9Q9Y5H5 ICE2P2-201ENST00000483823 2787 ntBASIC2.11□□□□□ -2.07
PCDHA9Q9Y5H5 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
PCDHA9Q9Y5H5 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.1□□□□□ -2.07
PCDHA9Q9Y5H5 SNORD115-34-201ENST00000362441 82 ntBASIC2.1□□□□□ -2.07
PCDHA9Q9Y5H5 RNU4-82P-201ENST00000362443 140 ntBASIC2.1□□□□□ -2.07
PCDHA9Q9Y5H5 SNORD115-12-201ENST00000362583 82 ntBASIC2.1□□□□□ -2.07
PCDHA9Q9Y5H5 SNORD115-29-201ENST00000362834 82 ntBASIC2.1□□□□□ -2.07
PCDHA9Q9Y5H5 SNORD115-9-201ENST00000362912 82 ntBASIC2.1□□□□□ -2.07
PCDHA9Q9Y5H5 SNORD115-21-201ENST00000362963 81 ntBASIC2.1□□□□□ -2.07
PCDHA9Q9Y5H5 SNORD115-14-201ENST00000363090 81 ntBASIC2.1□□□□□ -2.07
PCDHA9Q9Y5H5 SNORD115-13-201ENST00000363358 82 ntBASIC2.1□□□□□ -2.07
PCDHA9Q9Y5H5 SNORD115-41-201ENST00000363608 82 ntBASIC2.1□□□□□ -2.07
PCDHA9Q9Y5H5 SNORD115-11-201ENST00000363616 82 ntBASIC2.1□□□□□ -2.07
PCDHA9Q9Y5H5 SNORD115-5-201ENST00000363633 82 ntBASIC2.1□□□□□ -2.07
PCDHA9Q9Y5H5 SNORD115-39-201ENST00000363694 82 ntBASIC2.1□□□□□ -2.07
PCDHA9Q9Y5H5 SNORD115-4-201ENST00000363810 82 ntBASIC2.1□□□□□ -2.07
PCDHA9Q9Y5H5 SNORD115-16-201ENST00000363887 82 ntBASIC2.1□□□□□ -2.07
PCDHA9Q9Y5H5 SNORD115-6-201ENST00000363942 82 ntBASIC2.1□□□□□ -2.07
PCDHA9Q9Y5H5 SNORD115-42-201ENST00000364273 82 ntBASIC2.1□□□□□ -2.07
PCDHA9Q9Y5H5 SNORD115-15-201ENST00000364809 81 ntBASIC2.1□□□□□ -2.07
PCDHA9Q9Y5H5 SNORD115-1-201ENST00000364961 82 ntBASIC2.1□□□□□ -2.07
PCDHA9Q9Y5H5 SNORD115-26-201ENST00000365067 82 ntBASIC2.1□□□□□ -2.07
PCDHA9Q9Y5H5 SNORD115-10-201ENST00000365073 81 ntBASIC2.1□□□□□ -2.07
PCDHA9Q9Y5H5 SNORD115-43-201ENST00000365503 82 ntBASIC2.1□□□□□ -2.07
PCDHA9Q9Y5H5 SNORD115-36-201ENST00000365629 82 ntBASIC2.1□□□□□ -2.07
PCDHA9Q9Y5H5 RNU6-80P-201ENST00000384195 107 ntBASIC2.1□□□□□ -2.07
PCDHA9Q9Y5H5 RNU6-22P-201ENST00000384355 107 ntBASIC2.1□□□□□ -2.07
PCDHA9Q9Y5H5 MIR1267-201ENST00000408723 78 ntBASIC2.1□□□□□ -2.07
PCDHA9Q9Y5H5 RNU4-53P-201ENST00000410828 140 ntBASIC2.1□□□□□ -2.07
PCDHA9Q9Y5H5 RNA5SP233-201ENST00000459153 113 ntBASIC2.1□□□□□ -2.07
PCDHA9Q9Y5H5 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.1□□□□□ -2.07
PCDHA9Q9Y5H5 SNORD115-40-201ENST00000606510 82 ntBASIC2.1□□□□□ -2.07
PCDHA9Q9Y5H5 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 205 ms