Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 RNU6-295P-201ENST00000516901 104 ntBASIC2.35□□□□□ -2.03
CTDP1Q9Y5B0 AC008507.4-201ENST00000585464 127 ntBASIC2.35□□□□□ -2.03
CTDP1Q9Y5B0 AC087685.1-201ENST00000587507 141 ntBASIC2.35□□□□□ -2.03
CTDP1Q9Y5B0 AC022217.4-201ENST00000604389 163 ntBASIC2.35□□□□□ -2.03
CTDP1Q9Y5B0 AL773524.1-201ENST00000614065 229 ntBASIC2.35□□□□□ -2.03
CTDP1Q9Y5B0 RNU1-58P-201ENST00000362413 163 ntBASIC2.34□□□□□ -2.03
CTDP1Q9Y5B0 Y_RNA.66-201ENST00000362862 102 ntBASIC2.34□□□□□ -2.03
CTDP1Q9Y5B0 Y_RNA.242-201ENST00000364473 110 ntBASIC2.34□□□□□ -2.03
CTDP1Q9Y5B0 RNA5SP37-201ENST00000365420 130 ntBASIC2.34□□□□□ -2.03
CTDP1Q9Y5B0 MIR802-201ENST00000390235 94 ntBASIC2.34□□□□□ -2.03
CTDP1Q9Y5B0 RNA5SP212-201ENST00000391223 107 ntBASIC2.34□□□□□ -2.03
CTDP1Q9Y5B0 Y_RNA.629-201ENST00000411368 105 ntBASIC2.34□□□□□ -2.03
CTDP1Q9Y5B0 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.34□□□□□ -2.03
CTDP1Q9Y5B0 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC2.34□□□□□ -2.03
CTDP1Q9Y5B0 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.34□□□□□ -2.03
CTDP1Q9Y5B0 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.04
CTDP1Q9Y5B0 U8.1-201ENST00000362843 134 ntBASIC2.33□□□□□ -2.04
CTDP1Q9Y5B0 SNORD68-201ENST00000363214 84 ntBASIC2.33□□□□□ -2.04
CTDP1Q9Y5B0 Y_RNA.120-201ENST00000363304 110 ntBASIC2.33□□□□□ -2.04
CTDP1Q9Y5B0 SNORD18B-201ENST00000365659 72 ntBASIC2.33□□□□□ -2.04
CTDP1Q9Y5B0 MIR522-201ENST00000385071 87 ntBASIC2.33□□□□□ -2.04
CTDP1Q9Y5B0 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
CTDP1Q9Y5B0 RNA5SP127-201ENST00000411051 133 ntBASIC2.33□□□□□ -2.04
CTDP1Q9Y5B0 AC244636.1-201ENST00000421152 228 ntBASIC2.33□□□□□ -2.04
CTDP1Q9Y5B0 Y_RNA.686-201ENST00000516548 134 ntBASIC2.33□□□□□ -2.04
CTDP1Q9Y5B0 Y_RNA.692-201ENST00000516627 105 ntBASIC2.33□□□□□ -2.04
CTDP1Q9Y5B0 AC007751.1-201ENST00000529260 376 ntBASIC2.33□□□□□ -2.04
CTDP1Q9Y5B0 AC005786.1-201ENST00000588553 154 ntBASIC2.33□□□□□ -2.04
CTDP1Q9Y5B0 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
CTDP1Q9Y5B0 BX510359.4-201ENST00000423750 193 ntBASIC2.32□□□□□ -2.04
CTDP1Q9Y5B0 AC245047.3-201ENST00000429428 127 ntBASIC2.32□□□□□ -2.04
CTDP1Q9Y5B0 FTH1P12-201ENST00000432137 551 ntBASIC2.32□□□□□ -2.04
CTDP1Q9Y5B0 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.32□□□□□ -2.04
CTDP1Q9Y5B0 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.32□□□□□ -2.04
CTDP1Q9Y5B0 AL353997.5-201ENST00000618886 171 ntBASIC2.32□□□□□ -2.04
CTDP1Q9Y5B0 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.32□□□□□ -2.04
CTDP1Q9Y5B0 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.31□□□□□ -2.04
CTDP1Q9Y5B0 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
CTDP1Q9Y5B0 Y_RNA.265-201ENST00000364677 108 ntBASIC2.31□□□□□ -2.04
CTDP1Q9Y5B0 Y_RNA.294-201ENST00000364916 102 ntBASIC2.31□□□□□ -2.04
CTDP1Q9Y5B0 MIR624-201ENST00000385217 97 ntBASIC2.31□□□□□ -2.04
CTDP1Q9Y5B0 RNU6-482P-201ENST00000391068 107 ntBASIC2.31□□□□□ -2.04
CTDP1Q9Y5B0 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.31□□□□□ -2.04
CTDP1Q9Y5B0 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.31□□□□□ -2.04
CTDP1Q9Y5B0 Y_RNA.666-201ENST00000516187 112 ntBASIC2.31□□□□□ -2.04
CTDP1Q9Y5B0 RNU6-1270P-201ENST00000517128 108 ntBASIC2.31□□□□□ -2.04
CTDP1Q9Y5B0 MIR3129-201ENST00000581095 76 ntBASIC2.31□□□□□ -2.04
CTDP1Q9Y5B0 AL365205.2-201ENST00000594586 68 ntBASIC2.31□□□□□ -2.04
CTDP1Q9Y5B0 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.31□□□□□ -2.04
CTDP1Q9Y5B0 U1.36-201ENST00000620684 176 ntBASIC2.31□□□□□ -2.04
CTDP1Q9Y5B0 AC022513.1-201ENST00000624512 117 ntBASIC2.31□□□□□ -2.04
CTDP1Q9Y5B0 RNU6-1084P-201ENST00000362498 107 ntBASIC2.3□□□□□ -2.04
CTDP1Q9Y5B0 RNA5SP99-201ENST00000364020 114 ntBASIC2.3□□□□□ -2.04
CTDP1Q9Y5B0 Y_RNA.273-201ENST00000364703 102 ntBASIC2.3□□□□□ -2.04
CTDP1Q9Y5B0 SNORD24-201ENST00000383884 75 ntBASIC2.3□□□□□ -2.04
CTDP1Q9Y5B0 SNORA1-201ENST00000384107 130 ntBASIC2.3□□□□□ -2.04
CTDP1Q9Y5B0 SNORD61-201ENST00000384252 73 ntBASIC2.3□□□□□ -2.04
CTDP1Q9Y5B0 RNA5SP109-201ENST00000391010 116 ntBASIC2.3□□□□□ -2.04
CTDP1Q9Y5B0 SNORA40.18-201ENST00000391200 128 ntBASIC2.3□□□□□ -2.04
CTDP1Q9Y5B0 AL606517.2-201ENST00000442855 241 ntBASIC2.3□□□□□ -2.04
CTDP1Q9Y5B0 RN7SKP179-201ENST00000516126 217 ntBASIC2.3□□□□□ -2.04
CTDP1Q9Y5B0 RNU6-693P-201ENST00000516134 107 ntBASIC2.3□□□□□ -2.04
CTDP1Q9Y5B0 RNU6-659P-201ENST00000516454 104 ntBASIC2.3□□□□□ -2.04
CTDP1Q9Y5B0 AC090049.2-201ENST00000550377 109 ntBASIC2.3□□□□□ -2.04
CTDP1Q9Y5B0 MIR4448-201ENST00000584360 86 ntBASIC2.3□□□□□ -2.04
CTDP1Q9Y5B0 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.3□□□□□ -2.04
CTDP1Q9Y5B0 AC069114.2-201ENST00000604699 304 ntBASIC2.3□□□□□ -2.04
CTDP1Q9Y5B0 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.3□□□□□ -2.04
CTDP1Q9Y5B0 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
CTDP1Q9Y5B0 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
CTDP1Q9Y5B0 RNU6-235P-201ENST00000362644 107 ntBASIC2.29□□□□□ -2.04
CTDP1Q9Y5B0 SNORD14E-201ENST00000364009 85 ntBASIC2.29□□□□□ -2.04
CTDP1Q9Y5B0 MIR676-201ENST00000390702 67 ntBASIC2.29□□□□□ -2.04
CTDP1Q9Y5B0 RNU11-3P-201ENST00000391111 133 ntBASIC2.29□□□□□ -2.04
CTDP1Q9Y5B0 HMGN2P19-201ENST00000425149 265 ntBASIC2.29□□□□□ -2.04
CTDP1Q9Y5B0 RNU7-107P-201ENST00000459121 61 ntBASIC2.29□□□□□ -2.04
CTDP1Q9Y5B0 AC104435.1-201ENST00000483483 166 ntBASIC2.29□□□□□ -2.04
CTDP1Q9Y5B0 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.29□□□□□ -2.04
CTDP1Q9Y5B0 RNU5E-3P-201ENST00000515913 68 ntBASIC2.29□□□□□ -2.04
CTDP1Q9Y5B0 Y_RNA.690-201ENST00000516603 95 ntBASIC2.29□□□□□ -2.04
CTDP1Q9Y5B0 MIR5094-201ENST00000578766 85 ntBASIC2.29□□□□□ -2.04
CTDP1Q9Y5B0 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
CTDP1Q9Y5B0 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC2.29□□□□□ -2.04
CTDP1Q9Y5B0 ZNF720P1-201ENST00000562403 1939 ntBASIC2.29□□□□□ -2.04
CTDP1Q9Y5B0 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.28□□□□□ -2.04
CTDP1Q9Y5B0 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC2.28□□□□□ -2.04
CTDP1Q9Y5B0 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.28□□□□□ -2.04
CTDP1Q9Y5B0 RNA5SP276-201ENST00000362580 94 ntBASIC2.28□□□□□ -2.04
CTDP1Q9Y5B0 Y_RNA.52-201ENST00000362760 96 ntBASIC2.28□□□□□ -2.04
CTDP1Q9Y5B0 RNU6-888P-201ENST00000363010 101 ntBASIC2.28□□□□□ -2.04
CTDP1Q9Y5B0 RNU6-1019P-201ENST00000364424 107 ntBASIC2.28□□□□□ -2.04
CTDP1Q9Y5B0 U8.13-201ENST00000390842 128 ntBASIC2.28□□□□□ -2.04
CTDP1Q9Y5B0 RNA5SP482-201ENST00000391269 118 ntBASIC2.28□□□□□ -2.04
CTDP1Q9Y5B0 SNORA26.9-201ENST00000391322 122 ntBASIC2.28□□□□□ -2.04
CTDP1Q9Y5B0 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.28□□□□□ -2.04
CTDP1Q9Y5B0 SNRPGP13-201ENST00000442212 177 ntBASIC2.28□□□□□ -2.04
CTDP1Q9Y5B0 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.28□□□□□ -2.04
CTDP1Q9Y5B0 RNA5SP182-201ENST00000516064 82 ntBASIC2.28□□□□□ -2.04
CTDP1Q9Y5B0 RNU7-28P-201ENST00000516759 62 ntBASIC2.28□□□□□ -2.04
CTDP1Q9Y5B0 AC084364.2-201ENST00000546924 395 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms