Protein–RNA interactions for Protein: Q9Y3Q3

TMED3, Transmembrane emp24 domain-containing protein 3, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMED3Q9Y3Q3 MIR4662B-201ENST00000579498 81 ntBASIC1.1□□□□□ -2.23
TMED3Q9Y3Q3 MIR4764-201ENST00000580680 88 ntBASIC1.1□□□□□ -2.23
TMED3Q9Y3Q3 PRELID3BP2-201ENST00000605362 201 ntBASIC1.1□□□□□ -2.23
TMED3Q9Y3Q3 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.1□□□□□ -2.23
TMED3Q9Y3Q3 Y_RNA.363-201ENST00000365529 113 ntBASIC1.09□□□□□ -2.23
TMED3Q9Y3Q3 Y_RNA.562-201ENST00000384695 113 ntBASIC1.09□□□□□ -2.23
TMED3Q9Y3Q3 MIR520C-201ENST00000385005 87 ntBASIC1.09□□□□□ -2.23
TMED3Q9Y3Q3 MIR618-201ENST00000385287 98 ntBASIC1.09□□□□□ -2.23
TMED3Q9Y3Q3 RPS23P4-201ENST00000487908 423 ntBASIC1.09□□□□□ -2.23
TMED3Q9Y3Q3 SNORD79.1-201ENST00000516069 84 ntBASIC1.09□□□□□ -2.23
TMED3Q9Y3Q3 RN7SKP164-201ENST00000516138 266 ntBASIC1.09□□□□□ -2.23
TMED3Q9Y3Q3 SNORA70.22-201ENST00000517160 124 ntBASIC1.09□□□□□ -2.23
TMED3Q9Y3Q3 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.09□□□□□ -2.23
TMED3Q9Y3Q3 AC068338.1-201ENST00000565567 176 ntBASIC1.09□□□□□ -2.23
TMED3Q9Y3Q3 AC006006.1-201ENST00000603082 144 ntBASIC1.09□□□□□ -2.23
TMED3Q9Y3Q3 snoU13.31-201ENST00000607291 104 ntBASIC1.09□□□□□ -2.23
TMED3Q9Y3Q3 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.09□□□□□ -2.23
TMED3Q9Y3Q3 Y_RNA.122-201ENST00000363331 96 ntBASIC1.08□□□□□ -2.24
TMED3Q9Y3Q3 RNA5SP48-201ENST00000363969 126 ntBASIC1.08□□□□□ -2.24
TMED3Q9Y3Q3 RNU6-60P-201ENST00000364792 103 ntBASIC1.08□□□□□ -2.24
TMED3Q9Y3Q3 Y_RNA.304-201ENST00000365011 112 ntBASIC1.08□□□□□ -2.24
TMED3Q9Y3Q3 RNU6-910P-201ENST00000390844 107 ntBASIC1.08□□□□□ -2.24
TMED3Q9Y3Q3 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.08□□□□□ -2.24
TMED3Q9Y3Q3 AL603825.1-201ENST00000438481 80 ntBASIC1.08□□□□□ -2.24
TMED3Q9Y3Q3 SNORD127-201ENST00000458892 86 ntBASIC1.08□□□□□ -2.24
TMED3Q9Y3Q3 RNU4-57P-201ENST00000515980 135 ntBASIC1.08□□□□□ -2.24
TMED3Q9Y3Q3 Y_RNA.668-201ENST00000516233 93 ntBASIC1.08□□□□□ -2.24
TMED3Q9Y3Q3 RNU6-126P-201ENST00000516685 103 ntBASIC1.08□□□□□ -2.24
TMED3Q9Y3Q3 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.08□□□□□ -2.24
TMED3Q9Y3Q3 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.08□□□□□ -2.24
TMED3Q9Y3Q3 AC012433.1-201ENST00000588916 398 ntBASIC1.08□□□□□ -2.24
TMED3Q9Y3Q3 AL049861.1-201ENST00000603130 150 ntBASIC1.08□□□□□ -2.24
TMED3Q9Y3Q3 BX284668.6-201ENST00000606899 438 ntBASIC1.08□□□□□ -2.24
TMED3Q9Y3Q3 AC099654.10-201ENST00000640395 161 ntBASIC1.08□□□□□ -2.24
TMED3Q9Y3Q3 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.08□□□□□ -2.24
TMED3Q9Y3Q3 ZNF209P-201ENST00000593450 2304 ntBASIC1.07□□□□□ -2.24
TMED3Q9Y3Q3 RNU1-124P-201ENST00000363861 145 ntBASIC1.07□□□□□ -2.24
TMED3Q9Y3Q3 Y_RNA.229-201ENST00000364347 113 ntBASIC1.07□□□□□ -2.24
TMED3Q9Y3Q3 SNORA25.8-201ENST00000364831 128 ntBASIC1.07□□□□□ -2.24
TMED3Q9Y3Q3 Y_RNA.288-201ENST00000364854 92 ntBASIC1.07□□□□□ -2.24
TMED3Q9Y3Q3 MIR19B1-201ENST00000384829 87 ntBASIC1.07□□□□□ -2.24
TMED3Q9Y3Q3 MIR568-201ENST00000385036 95 ntBASIC1.07□□□□□ -2.24
TMED3Q9Y3Q3 Y_RNA.590-201ENST00000410140 107 ntBASIC1.07□□□□□ -2.24
TMED3Q9Y3Q3 RNU6-651P-201ENST00000411040 105 ntBASIC1.07□□□□□ -2.24
TMED3Q9Y3Q3 BTF3P4-201ENST00000418852 495 ntBASIC1.07□□□□□ -2.24
TMED3Q9Y3Q3 RNU7-41P-201ENST00000515917 61 ntBASIC1.07□□□□□ -2.24
TMED3Q9Y3Q3 DNAJC19P9-201ENST00000555084 351 ntBASIC1.07□□□□□ -2.24
TMED3Q9Y3Q3 MIR4498-201ENST00000577599 66 ntBASIC1.07□□□□□ -2.24
TMED3Q9Y3Q3 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.07□□□□□ -2.24
TMED3Q9Y3Q3 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.07□□□□□ -2.24
TMED3Q9Y3Q3 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
TMED3Q9Y3Q3 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.07□□□□□ -2.24
TMED3Q9Y3Q3 Y_RNA.24-201ENST00000362508 103 ntBASIC1.06□□□□□ -2.24
TMED3Q9Y3Q3 RNU4-10P-201ENST00000364383 140 ntBASIC1.06□□□□□ -2.24
TMED3Q9Y3Q3 RNY3P5-201ENST00000384127 102 ntBASIC1.06□□□□□ -2.24
TMED3Q9Y3Q3 SNORA70.7-201ENST00000384159 133 ntBASIC1.06□□□□□ -2.24
TMED3Q9Y3Q3 SNORA80D-201ENST00000384488 135 ntBASIC1.06□□□□□ -2.24
TMED3Q9Y3Q3 U8.17-201ENST00000391292 132 ntBASIC1.06□□□□□ -2.24
TMED3Q9Y3Q3 MIR548H3-201ENST00000408771 118 ntBASIC1.06□□□□□ -2.24
TMED3Q9Y3Q3 RNU4-62P-201ENST00000410125 130 ntBASIC1.06□□□□□ -2.24
TMED3Q9Y3Q3 RPS26P48-201ENST00000491713 339 ntBASIC1.06□□□□□ -2.24
TMED3Q9Y3Q3 Y_RNA.676-201ENST00000516393 96 ntBASIC1.06□□□□□ -2.24
TMED3Q9Y3Q3 RNA5SP404-201ENST00000517118 132 ntBASIC1.06□□□□□ -2.24
TMED3Q9Y3Q3 MIR4303-201ENST00000581299 66 ntBASIC1.06□□□□□ -2.24
TMED3Q9Y3Q3 MIR548AR-201ENST00000582191 57 ntBASIC1.06□□□□□ -2.24
TMED3Q9Y3Q3 AL157834.3-201ENST00000615543 103 ntBASIC1.06□□□□□ -2.24
TMED3Q9Y3Q3 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
TMED3Q9Y3Q3 RNA5SP264-201ENST00000363115 107 ntBASIC1.05□□□□□ -2.24
TMED3Q9Y3Q3 Y_RNA.370-201ENST00000365589 108 ntBASIC1.05□□□□□ -2.24
TMED3Q9Y3Q3 SNORD28B-201ENST00000390993 75 ntBASIC1.05□□□□□ -2.24
TMED3Q9Y3Q3 SNORA17.3-201ENST00000391159 129 ntBASIC1.05□□□□□ -2.24
TMED3Q9Y3Q3 Y_RNA.587-201ENST00000391210 103 ntBASIC1.05□□□□□ -2.24
TMED3Q9Y3Q3 MIR1302-3-201ENST00000408128 138 ntBASIC1.05□□□□□ -2.24
TMED3Q9Y3Q3 RNU2-38P-201ENST00000410856 79 ntBASIC1.05□□□□□ -2.24
TMED3Q9Y3Q3 RNU2-55P-201ENST00000411146 174 ntBASIC1.05□□□□□ -2.24
TMED3Q9Y3Q3 COX6CP14-201ENST00000469580 174 ntBASIC1.05□□□□□ -2.24
TMED3Q9Y3Q3 AC011921.3-201ENST00000605540 361 ntBASIC1.05□□□□□ -2.24
TMED3Q9Y3Q3 AC015726.2-201ENST00000620112 122 ntBASIC1.05□□□□□ -2.24
TMED3Q9Y3Q3 AC008133.2-201ENST00000624540 351 ntBASIC1.05□□□□□ -2.24
TMED3Q9Y3Q3 SNORA1.2-201ENST00000365189 134 ntBASIC1.04□□□□□ -2.24
TMED3Q9Y3Q3 SNORD24-201ENST00000383884 75 ntBASIC1.04□□□□□ -2.24
TMED3Q9Y3Q3 Y_RNA.572-201ENST00000384757 98 ntBASIC1.04□□□□□ -2.24
TMED3Q9Y3Q3 SNORD58.1-201ENST00000391313 66 ntBASIC1.04□□□□□ -2.24
TMED3Q9Y3Q3 MIR548O-201ENST00000408583 114 ntBASIC1.04□□□□□ -2.24
TMED3Q9Y3Q3 RNU1-123P-201ENST00000458950 160 ntBASIC1.04□□□□□ -2.24
TMED3Q9Y3Q3 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.04□□□□□ -2.24
TMED3Q9Y3Q3 Y_RNA.679-201ENST00000516416 91 ntBASIC1.04□□□□□ -2.24
TMED3Q9Y3Q3 RNU7-25P-201ENST00000516544 62 ntBASIC1.04□□□□□ -2.24
TMED3Q9Y3Q3 MIR4643-201ENST00000577473 78 ntBASIC1.04□□□□□ -2.24
TMED3Q9Y3Q3 AL353621.2-201ENST00000605340 133 ntBASIC1.04□□□□□ -2.24
TMED3Q9Y3Q3 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.04□□□□□ -2.24
TMED3Q9Y3Q3 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.03□□□□□ -2.24
TMED3Q9Y3Q3 RNU6-653P-201ENST00000363074 106 ntBASIC1.03□□□□□ -2.24
TMED3Q9Y3Q3 RNY1P10-201ENST00000363268 113 ntBASIC1.03□□□□□ -2.24
TMED3Q9Y3Q3 Y_RNA.164-201ENST00000363709 102 ntBASIC1.03□□□□□ -2.24
TMED3Q9Y3Q3 SNORA7.1-201ENST00000363750 139 ntBASIC1.03□□□□□ -2.24
TMED3Q9Y3Q3 Y_RNA.416-201ENST00000384014 113 ntBASIC1.03□□□□□ -2.24
TMED3Q9Y3Q3 Y_RNA.486-201ENST00000384398 107 ntBASIC1.03□□□□□ -2.24
TMED3Q9Y3Q3 Y_RNA.537-201ENST00000384626 109 ntBASIC1.03□□□□□ -2.24
TMED3Q9Y3Q3 RNU6-939P-201ENST00000384634 107 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 171.1 ms