Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 SNORD115-34-201ENST00000362441 82 ntBASIC0.31□□□□□ -2.36
KCNIP3Q9Y2W7 SNORD115-12-201ENST00000362583 82 ntBASIC0.31□□□□□ -2.36
KCNIP3Q9Y2W7 SNORD115-29-201ENST00000362834 82 ntBASIC0.31□□□□□ -2.36
KCNIP3Q9Y2W7 SNORD115-9-201ENST00000362912 82 ntBASIC0.31□□□□□ -2.36
KCNIP3Q9Y2W7 SNORD115-21-201ENST00000362963 81 ntBASIC0.31□□□□□ -2.36
KCNIP3Q9Y2W7 SNORD115-14-201ENST00000363090 81 ntBASIC0.31□□□□□ -2.36
KCNIP3Q9Y2W7 SNORD115-13-201ENST00000363358 82 ntBASIC0.31□□□□□ -2.36
KCNIP3Q9Y2W7 Y_RNA.136-201ENST00000363444 102 ntBASIC0.31□□□□□ -2.36
KCNIP3Q9Y2W7 SNORD115-41-201ENST00000363608 82 ntBASIC0.31□□□□□ -2.36
KCNIP3Q9Y2W7 SNORD115-11-201ENST00000363616 82 ntBASIC0.31□□□□□ -2.36
KCNIP3Q9Y2W7 SNORD115-5-201ENST00000363633 82 ntBASIC0.31□□□□□ -2.36
KCNIP3Q9Y2W7 SNORD115-39-201ENST00000363694 82 ntBASIC0.31□□□□□ -2.36
KCNIP3Q9Y2W7 SNORD115-4-201ENST00000363810 82 ntBASIC0.31□□□□□ -2.36
KCNIP3Q9Y2W7 SNORD115-16-201ENST00000363887 82 ntBASIC0.31□□□□□ -2.36
KCNIP3Q9Y2W7 SNORD115-6-201ENST00000363942 82 ntBASIC0.31□□□□□ -2.36
KCNIP3Q9Y2W7 SNORD115-42-201ENST00000364273 82 ntBASIC0.31□□□□□ -2.36
KCNIP3Q9Y2W7 Y_RNA.813-201ENST00000364639 102 ntBASIC0.31□□□□□ -2.36
KCNIP3Q9Y2W7 SNORD115-15-201ENST00000364809 81 ntBASIC0.31□□□□□ -2.36
KCNIP3Q9Y2W7 SNORD115-1-201ENST00000364961 82 ntBASIC0.31□□□□□ -2.36
KCNIP3Q9Y2W7 SNORD115-26-201ENST00000365067 82 ntBASIC0.31□□□□□ -2.36
KCNIP3Q9Y2W7 SNORD115-10-201ENST00000365073 81 ntBASIC0.31□□□□□ -2.36
KCNIP3Q9Y2W7 SNORD115-43-201ENST00000365503 82 ntBASIC0.31□□□□□ -2.36
KCNIP3Q9Y2W7 SNORD115-36-201ENST00000365629 82 ntBASIC0.31□□□□□ -2.36
KCNIP3Q9Y2W7 SNORA50A-201ENST00000384225 134 ntBASIC0.31□□□□□ -2.36
KCNIP3Q9Y2W7 RNY1P14-201ENST00000384426 108 ntBASIC0.31□□□□□ -2.36
KCNIP3Q9Y2W7 MIR23A-201ENST00000385245 73 ntBASIC0.31□□□□□ -2.36
KCNIP3Q9Y2W7 RNU6-308P-201ENST00000390957 107 ntBASIC0.31□□□□□ -2.36
KCNIP3Q9Y2W7 AC236972.2-201ENST00000434979 310 ntBASIC0.31□□□□□ -2.36
KCNIP3Q9Y2W7 AC092628.1-201ENST00000436250 252 ntBASIC0.31□□□□□ -2.36
KCNIP3Q9Y2W7 AC107297.1-201ENST00000459991 176 ntBASIC0.31□□□□□ -2.36
KCNIP3Q9Y2W7 AC091959.1-201ENST00000495857 238 ntBASIC0.31□□□□□ -2.36
KCNIP3Q9Y2W7 TRMT112P2-201ENST00000512910 132 ntBASIC0.31□□□□□ -2.36
KCNIP3Q9Y2W7 MIR3612-201ENST00000579753 87 ntBASIC0.31□□□□□ -2.36
KCNIP3Q9Y2W7 AL355297.3-201ENST00000604082 446 ntBASIC0.31□□□□□ -2.36
KCNIP3Q9Y2W7 SNORD115-40-201ENST00000606510 82 ntBASIC0.31□□□□□ -2.36
KCNIP3Q9Y2W7 RNA5SP347-201ENST00000362445 119 ntBASIC0.3□□□□□ -2.36
KCNIP3Q9Y2W7 SNORA63C-201ENST00000364578 129 ntBASIC0.3□□□□□ -2.36
KCNIP3Q9Y2W7 RNU6-1138P-201ENST00000365359 106 ntBASIC0.3□□□□□ -2.36
KCNIP3Q9Y2W7 BTF3P11-201ENST00000426582 477 ntBASIC0.3□□□□□ -2.36
KCNIP3Q9Y2W7 AC015818.7-201ENST00000428754 109 ntBASIC0.3□□□□□ -2.36
KCNIP3Q9Y2W7 AC087499.7-201ENST00000441958 109 ntBASIC0.3□□□□□ -2.36
KCNIP3Q9Y2W7 AC023449.1-201ENST00000454464 154 ntBASIC0.3□□□□□ -2.36
KCNIP3Q9Y2W7 RNU7-62P-201ENST00000458856 62 ntBASIC0.3□□□□□ -2.36
KCNIP3Q9Y2W7 RNA5SP458-201ENST00000516188 119 ntBASIC0.3□□□□□ -2.36
KCNIP3Q9Y2W7 RNU7-149P-201ENST00000516739 59 ntBASIC0.3□□□□□ -2.36
KCNIP3Q9Y2W7 MIR4524B-201ENST00000581569 115 ntBASIC0.3□□□□□ -2.36
KCNIP3Q9Y2W7 MIR4676-201ENST00000583078 72 ntBASIC0.3□□□□□ -2.36
KCNIP3Q9Y2W7 AC134878.1-201ENST00000619901 243 ntBASIC0.3□□□□□ -2.36
KCNIP3Q9Y2W7 RNU6-1205P-201ENST00000363625 106 ntBASIC0.29□□□□□ -2.36
KCNIP3Q9Y2W7 Y_RNA.315-201ENST00000365117 102 ntBASIC0.29□□□□□ -2.36
KCNIP3Q9Y2W7 Y_RNA.529-201ENST00000384586 119 ntBASIC0.29□□□□□ -2.36
KCNIP3Q9Y2W7 RNU6-763P-201ENST00000390865 106 ntBASIC0.29□□□□□ -2.36
KCNIP3Q9Y2W7 RNU7-56P-201ENST00000458744 62 ntBASIC0.29□□□□□ -2.36
KCNIP3Q9Y2W7 RNU6-764P-201ENST00000516396 105 ntBASIC0.29□□□□□ -2.36
KCNIP3Q9Y2W7 SNORA18.4-201ENST00000516440 124 ntBASIC0.29□□□□□ -2.36
KCNIP3Q9Y2W7 RNU6-875P-201ENST00000516488 106 ntBASIC0.29□□□□□ -2.36
KCNIP3Q9Y2W7 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
KCNIP3Q9Y2W7 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.29□□□□□ -2.36
KCNIP3Q9Y2W7 C8orf59P2-201ENST00000603441 271 ntBASIC0.29□□□□□ -2.36
KCNIP3Q9Y2W7 AP000942.4-201ENST00000604811 241 ntBASIC0.29□□□□□ -2.36
KCNIP3Q9Y2W7 AC020891.4-201ENST00000605745 93 ntBASIC0.29□□□□□ -2.36
KCNIP3Q9Y2W7 AC006157.1-201ENST00000611750 366 ntBASIC0.29□□□□□ -2.36
KCNIP3Q9Y2W7 AC122108.2-201ENST00000611946 526 ntBASIC0.29□□□□□ -2.36
KCNIP3Q9Y2W7 AC090625.1-201ENST00000357130 210 ntBASIC0.28□□□□□ -2.36
KCNIP3Q9Y2W7 Y_RNA.241-201ENST00000364470 117 ntBASIC0.28□□□□□ -2.36
KCNIP3Q9Y2W7 Y_RNA.263-201ENST00000364659 114 ntBASIC0.28□□□□□ -2.36
KCNIP3Q9Y2W7 Y_RNA.494-201ENST00000384432 111 ntBASIC0.28□□□□□ -2.36
KCNIP3Q9Y2W7 RNA5SP496-201ENST00000391240 109 ntBASIC0.28□□□□□ -2.36
KCNIP3Q9Y2W7 MIR1302-11-201ENST00000408051 138 ntBASIC0.28□□□□□ -2.36
KCNIP3Q9Y2W7 MIR1302-9-201ENST00000408365 138 ntBASIC0.28□□□□□ -2.36
KCNIP3Q9Y2W7 MIR1302-10-201ENST00000408734 138 ntBASIC0.28□□□□□ -2.36
KCNIP3Q9Y2W7 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.28□□□□□ -2.36
KCNIP3Q9Y2W7 RNU7-73P-201ENST00000458743 63 ntBASIC0.28□□□□□ -2.36
KCNIP3Q9Y2W7 RNU6-1046P-201ENST00000516538 107 ntBASIC0.28□□□□□ -2.36
KCNIP3Q9Y2W7 RNU6-229P-201ENST00000516614 102 ntBASIC0.28□□□□□ -2.36
KCNIP3Q9Y2W7 MIR1302-2-201ENST00000607096 138 ntBASIC0.28□□□□□ -2.36
KCNIP3Q9Y2W7 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.28□□□□□ -2.36
KCNIP3Q9Y2W7 Y_RNA.112-201ENST00000363250 102 ntBASIC0.27□□□□□ -2.37
KCNIP3Q9Y2W7 SNORD113-8-201ENST00000363497 74 ntBASIC0.27□□□□□ -2.37
KCNIP3Q9Y2W7 RNA5SP499-201ENST00000363982 119 ntBASIC0.27□□□□□ -2.37
KCNIP3Q9Y2W7 MIR216A-201ENST00000385063 110 ntBASIC0.27□□□□□ -2.37
KCNIP3Q9Y2W7 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.27□□□□□ -2.37
KCNIP3Q9Y2W7 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.27□□□□□ -2.37
KCNIP3Q9Y2W7 AC087499.4-201ENST00000448505 178 ntBASIC0.27□□□□□ -2.37
KCNIP3Q9Y2W7 HSPE1P25-201ENST00000455484 251 ntBASIC0.27□□□□□ -2.37
KCNIP3Q9Y2W7 RNU7-67P-201ENST00000459003 62 ntBASIC0.27□□□□□ -2.37
KCNIP3Q9Y2W7 AC002350.1-201ENST00000490759 375 ntBASIC0.27□□□□□ -2.37
KCNIP3Q9Y2W7 AC007751.1-201ENST00000529260 376 ntBASIC0.27□□□□□ -2.37
KCNIP3Q9Y2W7 AL162730.1-201ENST00000605734 292 ntBASIC0.27□□□□□ -2.37
KCNIP3Q9Y2W7 uc_338.6-201ENST00000613544 171 ntBASIC0.27□□□□□ -2.37
KCNIP3Q9Y2W7 MIR376A1-201ENST00000616574 68 ntBASIC0.27□□□□□ -2.37
KCNIP3Q9Y2W7 AC013791.1-201ENST00000616619 62 ntBASIC0.27□□□□□ -2.37
KCNIP3Q9Y2W7 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.27□□□□□ -2.37
KCNIP3Q9Y2W7 MIR5087-201ENST00000635826 76 ntBASIC0.27□□□□□ -2.37
KCNIP3Q9Y2W7 SNORD115-28-201ENST00000363931 81 ntBASIC0.26□□□□□ -2.37
KCNIP3Q9Y2W7 Y_RNA.197-201ENST00000364004 102 ntBASIC0.26□□□□□ -2.37
KCNIP3Q9Y2W7 Y_RNA.303-201ENST00000364998 94 ntBASIC0.26□□□□□ -2.37
KCNIP3Q9Y2W7 RNU6-102P-201ENST00000384485 104 ntBASIC0.26□□□□□ -2.37
KCNIP3Q9Y2W7 Y_RNA.587-201ENST00000391210 103 ntBASIC0.26□□□□□ -2.37
KCNIP3Q9Y2W7 MIR938-201ENST00000401216 83 ntBASIC0.26□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 168.5 ms