Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 SNORD109B-201ENST00000458961 67 ntBASIC2.85□□□□□ -1.95
FNDC3AQ9Y2H6 SNORD109A-201ENST00000459128 67 ntBASIC2.85□□□□□ -1.95
FNDC3AQ9Y2H6 RNA5SP281-201ENST00000516504 135 ntBASIC2.85□□□□□ -1.95
FNDC3AQ9Y2H6 RNA5SP137-201ENST00000516833 135 ntBASIC2.85□□□□□ -1.95
FNDC3AQ9Y2H6 IGKV3-31-201ENST00000523109 329 ntBASIC2.85□□□□□ -1.95
FNDC3AQ9Y2H6 AC078899.2-201ENST00000595282 212 ntBASIC2.85□□□□□ -1.95
FNDC3AQ9Y2H6 RNU6-94P-201ENST00000607728 107 ntBASIC2.85□□□□□ -1.95
FNDC3AQ9Y2H6 FAM35CP-201ENST00000554755 2470 ntBASIC2.85□□□□□ -1.95
FNDC3AQ9Y2H6 AC007336.1-201ENST00000576365 3828 ntBASIC2.85□□□□□ -1.95
FNDC3AQ9Y2H6 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
FNDC3AQ9Y2H6 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
FNDC3AQ9Y2H6 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
FNDC3AQ9Y2H6 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.95
FNDC3AQ9Y2H6 RNU6-424P-201ENST00000384367 105 ntBASIC2.84□□□□□ -1.95
FNDC3AQ9Y2H6 MIR516B2-201ENST00000385190 85 ntBASIC2.84□□□□□ -1.95
FNDC3AQ9Y2H6 MIR1261-201ENST00000408659 82 ntBASIC2.84□□□□□ -1.95
FNDC3AQ9Y2H6 AC069257.2-201ENST00000441819 155 ntBASIC2.84□□□□□ -1.95
FNDC3AQ9Y2H6 AC093850.1-201ENST00000454121 251 ntBASIC2.84□□□□□ -1.95
FNDC3AQ9Y2H6 SNORA31.4-201ENST00000516049 129 ntBASIC2.84□□□□□ -1.95
FNDC3AQ9Y2H6 AP001318.4-201ENST00000616637 121 ntBASIC2.84□□□□□ -1.95
FNDC3AQ9Y2H6 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
FNDC3AQ9Y2H6 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
FNDC3AQ9Y2H6 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.83□□□□□ -1.96
FNDC3AQ9Y2H6 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
FNDC3AQ9Y2H6 RNU6-640P-201ENST00000363693 105 ntBASIC2.83□□□□□ -1.96
FNDC3AQ9Y2H6 SNORA63D-201ENST00000364359 132 ntBASIC2.83□□□□□ -1.96
FNDC3AQ9Y2H6 MIR196B-201ENST00000384852 84 ntBASIC2.83□□□□□ -1.96
FNDC3AQ9Y2H6 MIR518A2-201ENST00000384966 87 ntBASIC2.83□□□□□ -1.96
FNDC3AQ9Y2H6 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
FNDC3AQ9Y2H6 MIR1267-201ENST00000408723 78 ntBASIC2.83□□□□□ -1.96
FNDC3AQ9Y2H6 RN7SKP123-201ENST00000410732 291 ntBASIC2.83□□□□□ -1.96
FNDC3AQ9Y2H6 AC090821.2-201ENST00000523552 176 ntBASIC2.83□□□□□ -1.96
FNDC3AQ9Y2H6 AC068339.1-201ENST00000526965 141 ntBASIC2.83□□□□□ -1.96
FNDC3AQ9Y2H6 MIR5009-201ENST00000578736 100 ntBASIC2.83□□□□□ -1.96
FNDC3AQ9Y2H6 MIR4506-201ENST00000584693 77 ntBASIC2.83□□□□□ -1.96
FNDC3AQ9Y2H6 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.83□□□□□ -1.96
FNDC3AQ9Y2H6 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
FNDC3AQ9Y2H6 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.82□□□□□ -1.96
FNDC3AQ9Y2H6 MIR302B-201ENST00000362188 73 ntBASIC2.82□□□□□ -1.96
FNDC3AQ9Y2H6 RNA5SP432-201ENST00000362480 116 ntBASIC2.82□□□□□ -1.96
FNDC3AQ9Y2H6 RNU6-833P-201ENST00000363486 107 ntBASIC2.82□□□□□ -1.96
FNDC3AQ9Y2H6 RNU6-1031P-201ENST00000384773 107 ntBASIC2.82□□□□□ -1.96
FNDC3AQ9Y2H6 MIR548D2-201ENST00000384955 97 ntBASIC2.82□□□□□ -1.96
FNDC3AQ9Y2H6 RNU2-7P-201ENST00000410794 178 ntBASIC2.82□□□□□ -1.96
FNDC3AQ9Y2H6 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.82□□□□□ -1.96
FNDC3AQ9Y2H6 RNA5SP385-201ENST00000515947 110 ntBASIC2.82□□□□□ -1.96
FNDC3AQ9Y2H6 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.82□□□□□ -1.96
FNDC3AQ9Y2H6 MIR3683-201ENST00000580847 82 ntBASIC2.82□□□□□ -1.96
FNDC3AQ9Y2H6 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
FNDC3AQ9Y2H6 Y_RNA.369-201ENST00000365568 117 ntBASIC2.81□□□□□ -1.96
FNDC3AQ9Y2H6 SNORA19.1-201ENST00000410656 129 ntBASIC2.81□□□□□ -1.96
FNDC3AQ9Y2H6 RNA5SP508-201ENST00000411327 119 ntBASIC2.81□□□□□ -1.96
FNDC3AQ9Y2H6 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.81□□□□□ -1.96
FNDC3AQ9Y2H6 RNU6-998P-201ENST00000515894 101 ntBASIC2.81□□□□□ -1.96
FNDC3AQ9Y2H6 RNU6-109P-201ENST00000516364 107 ntBASIC2.81□□□□□ -1.96
FNDC3AQ9Y2H6 RNU6-184P-201ENST00000516514 107 ntBASIC2.81□□□□□ -1.96
FNDC3AQ9Y2H6 RNU7-6P-201ENST00000516845 62 ntBASIC2.81□□□□□ -1.96
FNDC3AQ9Y2H6 RNA5SP437-201ENST00000517249 129 ntBASIC2.81□□□□□ -1.96
FNDC3AQ9Y2H6 ZNF861P-201ENST00000588126 639 ntBASIC2.81□□□□□ -1.96
FNDC3AQ9Y2H6 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.81□□□□□ -1.96
FNDC3AQ9Y2H6 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
FNDC3AQ9Y2H6 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
FNDC3AQ9Y2H6 SNORD115-34-201ENST00000362441 82 ntBASIC2.8□□□□□ -1.96
FNDC3AQ9Y2H6 SNORD115-12-201ENST00000362583 82 ntBASIC2.8□□□□□ -1.96
FNDC3AQ9Y2H6 SNORD115-29-201ENST00000362834 82 ntBASIC2.8□□□□□ -1.96
FNDC3AQ9Y2H6 SNORD115-9-201ENST00000362912 82 ntBASIC2.8□□□□□ -1.96
FNDC3AQ9Y2H6 SNORD115-21-201ENST00000362963 81 ntBASIC2.8□□□□□ -1.96
FNDC3AQ9Y2H6 SNORD115-14-201ENST00000363090 81 ntBASIC2.8□□□□□ -1.96
FNDC3AQ9Y2H6 SNORD115-13-201ENST00000363358 82 ntBASIC2.8□□□□□ -1.96
FNDC3AQ9Y2H6 SNORD115-41-201ENST00000363608 82 ntBASIC2.8□□□□□ -1.96
FNDC3AQ9Y2H6 SNORD115-11-201ENST00000363616 82 ntBASIC2.8□□□□□ -1.96
FNDC3AQ9Y2H6 SNORD115-5-201ENST00000363633 82 ntBASIC2.8□□□□□ -1.96
FNDC3AQ9Y2H6 SNORD115-39-201ENST00000363694 82 ntBASIC2.8□□□□□ -1.96
FNDC3AQ9Y2H6 SNORD115-4-201ENST00000363810 82 ntBASIC2.8□□□□□ -1.96
FNDC3AQ9Y2H6 SNORD115-16-201ENST00000363887 82 ntBASIC2.8□□□□□ -1.96
FNDC3AQ9Y2H6 SNORD115-6-201ENST00000363942 82 ntBASIC2.8□□□□□ -1.96
FNDC3AQ9Y2H6 SNORD115-42-201ENST00000364273 82 ntBASIC2.8□□□□□ -1.96
FNDC3AQ9Y2H6 SNORD115-15-201ENST00000364809 81 ntBASIC2.8□□□□□ -1.96
FNDC3AQ9Y2H6 SNORD115-1-201ENST00000364961 82 ntBASIC2.8□□□□□ -1.96
FNDC3AQ9Y2H6 SNORD115-26-201ENST00000365067 82 ntBASIC2.8□□□□□ -1.96
FNDC3AQ9Y2H6 SNORD115-10-201ENST00000365073 81 ntBASIC2.8□□□□□ -1.96
FNDC3AQ9Y2H6 SNORD115-43-201ENST00000365503 82 ntBASIC2.8□□□□□ -1.96
FNDC3AQ9Y2H6 SNORD115-36-201ENST00000365629 82 ntBASIC2.8□□□□□ -1.96
FNDC3AQ9Y2H6 AL512326.2-201ENST00000426359 151 ntBASIC2.8□□□□□ -1.96
FNDC3AQ9Y2H6 AL035398.1-201ENST00000430869 322 ntBASIC2.8□□□□□ -1.96
FNDC3AQ9Y2H6 RNU2-11P-201ENST00000459191 187 ntBASIC2.8□□□□□ -1.96
FNDC3AQ9Y2H6 RNU7-45P-201ENST00000459460 63 ntBASIC2.8□□□□□ -1.96
FNDC3AQ9Y2H6 RPL23AP63-201ENST00000498752 471 ntBASIC2.8□□□□□ -1.96
FNDC3AQ9Y2H6 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.8□□□□□ -1.96
FNDC3AQ9Y2H6 SNORA72.7-201ENST00000516349 94 ntBASIC2.8□□□□□ -1.96
FNDC3AQ9Y2H6 SCARNA16.3-201ENST00000516595 184 ntBASIC2.8□□□□□ -1.96
FNDC3AQ9Y2H6 IGLV3-17-201ENST00000519099 244 ntBASIC2.8□□□□□ -1.96
FNDC3AQ9Y2H6 MIR3163-201ENST00000581592 73 ntBASIC2.8□□□□□ -1.96
FNDC3AQ9Y2H6 SNORD115-40-201ENST00000606510 82 ntBASIC2.8□□□□□ -1.96
FNDC3AQ9Y2H6 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
FNDC3AQ9Y2H6 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.79□□□□□ -1.96
FNDC3AQ9Y2H6 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.79□□□□□ -1.96
FNDC3AQ9Y2H6 RNU6-1113P-201ENST00000384348 107 ntBASIC2.79□□□□□ -1.96
FNDC3AQ9Y2H6 RNU6-950P-201ENST00000384651 107 ntBASIC2.79□□□□□ -1.96
FNDC3AQ9Y2H6 MIR590-201ENST00000385008 97 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms