Protein–RNA interactions for Protein: Q9UQE7

SMC3, Structural maintenance of chromosomes protein 3, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3Q9UQE7 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.82□□□□□ -2.28
SMC3Q9UQE7 MIR4764-201ENST00000580680 88 ntBASIC0.82□□□□□ -2.28
SMC3Q9UQE7 RNU6-94P-201ENST00000607728 107 ntBASIC0.82□□□□□ -2.28
SMC3Q9UQE7 AL008718.3-201ENST00000610217 321 ntBASIC0.82□□□□□ -2.28
SMC3Q9UQE7 AC108706.1-201ENST00000611053 297 ntBASIC0.82□□□□□ -2.28
SMC3Q9UQE7 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.82□□□□□ -2.28
SMC3Q9UQE7 RNU6-770P-201ENST00000363929 105 ntBASIC0.81□□□□□ -2.28
SMC3Q9UQE7 snoU2-30.1-201ENST00000365012 70 ntBASIC0.81□□□□□ -2.28
SMC3Q9UQE7 Y_RNA.431-201ENST00000384086 102 ntBASIC0.81□□□□□ -2.28
SMC3Q9UQE7 Y_RNA.455-201ENST00000384230 98 ntBASIC0.81□□□□□ -2.28
SMC3Q9UQE7 MIR518E-201ENST00000385252 88 ntBASIC0.81□□□□□ -2.28
SMC3Q9UQE7 AC004941.2-201ENST00000427009 228 ntBASIC0.81□□□□□ -2.28
SMC3Q9UQE7 AC015818.7-201ENST00000428754 109 ntBASIC0.81□□□□□ -2.28
SMC3Q9UQE7 MTCYBP6-201ENST00000441810 138 ntBASIC0.81□□□□□ -2.28
SMC3Q9UQE7 AC087499.7-201ENST00000441958 109 ntBASIC0.81□□□□□ -2.28
SMC3Q9UQE7 SNORD11-201ENST00000459124 84 ntBASIC0.81□□□□□ -2.28
SMC3Q9UQE7 RNU6-437P-201ENST00000459408 95 ntBASIC0.81□□□□□ -2.28
SMC3Q9UQE7 AC091959.1-201ENST00000495857 238 ntBASIC0.81□□□□□ -2.28
SMC3Q9UQE7 SNORA74.3-201ENST00000517108 154 ntBASIC0.81□□□□□ -2.28
SMC3Q9UQE7 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.81□□□□□ -2.28
SMC3Q9UQE7 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.81□□□□□ -2.28
SMC3Q9UQE7 AL049861.1-201ENST00000603130 150 ntBASIC0.81□□□□□ -2.28
SMC3Q9UQE7 AL138825.1-201ENST00000618587 192 ntBASIC0.81□□□□□ -2.28
SMC3Q9UQE7 AC015726.2-201ENST00000620112 122 ntBASIC0.81□□□□□ -2.28
SMC3Q9UQE7 AC022140.2-201ENST00000623500 188 ntBASIC0.81□□□□□ -2.28
SMC3Q9UQE7 RNU6-268P-201ENST00000364174 107 ntBASIC0.8□□□□□ -2.28
SMC3Q9UQE7 SNORD114-22-201ENST00000365423 72 ntBASIC0.8□□□□□ -2.28
SMC3Q9UQE7 MIR136-201ENST00000385207 82 ntBASIC0.8□□□□□ -2.28
SMC3Q9UQE7 Y_RNA.581-201ENST00000391017 97 ntBASIC0.8□□□□□ -2.28
SMC3Q9UQE7 RNU6-710P-201ENST00000410424 105 ntBASIC0.8□□□□□ -2.28
SMC3Q9UQE7 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.8□□□□□ -2.28
SMC3Q9UQE7 RN7SKP164-201ENST00000516138 266 ntBASIC0.8□□□□□ -2.28
SMC3Q9UQE7 JPX_2.1-201ENST00000614161 69 ntBASIC0.8□□□□□ -2.28
SMC3Q9UQE7 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
SMC3Q9UQE7 MIR96-201ENST00000362288 78 ntBASIC0.79□□□□□ -2.28
SMC3Q9UQE7 MIR942-201ENST00000401111 86 ntBASIC0.79□□□□□ -2.28
SMC3Q9UQE7 RNU6-733P-201ENST00000410759 104 ntBASIC0.79□□□□□ -2.28
SMC3Q9UQE7 RPS3AP1-201ENST00000413190 320 ntBASIC0.79□□□□□ -2.28
SMC3Q9UQE7 snoU13.21-201ENST00000459368 105 ntBASIC0.79□□□□□ -2.28
SMC3Q9UQE7 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.79□□□□□ -2.28
SMC3Q9UQE7 SNORA40.15-201ENST00000516884 107 ntBASIC0.79□□□□□ -2.28
SMC3Q9UQE7 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.79□□□□□ -2.28
SMC3Q9UQE7 AP003733.2-201ENST00000529409 171 ntBASIC0.79□□□□□ -2.28
SMC3Q9UQE7 AC008507.4-201ENST00000585464 127 ntBASIC0.79□□□□□ -2.28
SMC3Q9UQE7 snoU18.1-201ENST00000629629 71 ntBASIC0.79□□□□□ -2.28
SMC3Q9UQE7 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.78□□□□□ -2.28
SMC3Q9UQE7 MIR103A2-201ENST00000362154 78 ntBASIC0.78□□□□□ -2.28
SMC3Q9UQE7 Y_RNA.84-201ENST00000363011 104 ntBASIC0.78□□□□□ -2.28
SMC3Q9UQE7 RNA5SP264-201ENST00000363115 107 ntBASIC0.78□□□□□ -2.28
SMC3Q9UQE7 Y_RNA.116-201ENST00000363292 103 ntBASIC0.78□□□□□ -2.28
SMC3Q9UQE7 Y_RNA.158-201ENST00000363651 101 ntBASIC0.78□□□□□ -2.28
SMC3Q9UQE7 SNORD14E-201ENST00000364009 85 ntBASIC0.78□□□□□ -2.28
SMC3Q9UQE7 RNU6-290P-201ENST00000365212 101 ntBASIC0.78□□□□□ -2.28
SMC3Q9UQE7 MIR15B-201ENST00000385045 98 ntBASIC0.78□□□□□ -2.28
SMC3Q9UQE7 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.78□□□□□ -2.28
SMC3Q9UQE7 AC090844.1-201ENST00000422019 156 ntBASIC0.78□□□□□ -2.28
SMC3Q9UQE7 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.78□□□□□ -2.28
SMC3Q9UQE7 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.78□□□□□ -2.28
SMC3Q9UQE7 RNA5SP220-201ENST00000516298 104 ntBASIC0.78□□□□□ -2.28
SMC3Q9UQE7 RNA5SP255-201ENST00000516370 107 ntBASIC0.78□□□□□ -2.28
SMC3Q9UQE7 RNU7-25P-201ENST00000516544 62 ntBASIC0.78□□□□□ -2.28
SMC3Q9UQE7 Y_RNA.714-201ENST00000517065 90 ntBASIC0.78□□□□□ -2.28
SMC3Q9UQE7 DEFB108E-201ENST00000524692 240 ntBASIC0.78□□□□□ -2.28
SMC3Q9UQE7 AP003716.2-201ENST00000528260 108 ntBASIC0.78□□□□□ -2.28
SMC3Q9UQE7 MIR6835-201ENST00000621552 64 ntBASIC0.78□□□□□ -2.28
SMC3Q9UQE7 RNU4-90P-201ENST00000362773 141 ntBASIC0.77□□□□□ -2.29
SMC3Q9UQE7 RNU6-1272P-201ENST00000362776 107 ntBASIC0.77□□□□□ -2.29
SMC3Q9UQE7 RNU6-238P-201ENST00000363313 106 ntBASIC0.77□□□□□ -2.29
SMC3Q9UQE7 Y_RNA.224-201ENST00000364308 111 ntBASIC0.77□□□□□ -2.29
SMC3Q9UQE7 SNORA33.2-201ENST00000365413 134 ntBASIC0.77□□□□□ -2.29
SMC3Q9UQE7 Y_RNA.380-201ENST00000365663 111 ntBASIC0.77□□□□□ -2.29
SMC3Q9UQE7 Y_RNA.526-201ENST00000384572 110 ntBASIC0.77□□□□□ -2.29
SMC3Q9UQE7 Y_RNA.666-201ENST00000516187 112 ntBASIC0.77□□□□□ -2.29
SMC3Q9UQE7 RNU7-116P-201ENST00000516940 62 ntBASIC0.77□□□□□ -2.29
SMC3Q9UQE7 AP003072.1-201ENST00000531740 145 ntBASIC0.77□□□□□ -2.29
SMC3Q9UQE7 Y_RNA.136-201ENST00000363444 102 ntBASIC0.76□□□□□ -2.29
SMC3Q9UQE7 RNU6-1205P-201ENST00000363625 106 ntBASIC0.76□□□□□ -2.29
SMC3Q9UQE7 Y_RNA.293-201ENST00000364908 93 ntBASIC0.76□□□□□ -2.29
SMC3Q9UQE7 HMGN2P32-201ENST00000444648 269 ntBASIC0.76□□□□□ -2.29
SMC3Q9UQE7 AC007751.1-201ENST00000529260 376 ntBASIC0.76□□□□□ -2.29
SMC3Q9UQE7 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.76□□□□□ -2.29
SMC3Q9UQE7 MIR548AO-201ENST00000579992 96 ntBASIC0.76□□□□□ -2.29
SMC3Q9UQE7 MIR6788-201ENST00000618842 66 ntBASIC0.76□□□□□ -2.29
SMC3Q9UQE7 MT-TT-201ENST00000387460 66 ntBASIC0.75□□□□□ -2.29
SMC3Q9UQE7 FABP5P4-201ENST00000437203 171 ntBASIC0.75□□□□□ -2.29
SMC3Q9UQE7 Y_RNA.721-201ENST00000517207 102 ntBASIC0.75□□□□□ -2.29
SMC3Q9UQE7 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
SMC3Q9UQE7 AC131055.1-201ENST00000584626 316 ntBASIC0.75□□□□□ -2.29
SMC3Q9UQE7 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.75□□□□□ -2.29
SMC3Q9UQE7 AL078603.1-201ENST00000603824 313 ntBASIC0.75□□□□□ -2.29
SMC3Q9UQE7 AC013791.1-201ENST00000616619 62 ntBASIC0.75□□□□□ -2.29
SMC3Q9UQE7 AC008133.2-201ENST00000624540 351 ntBASIC0.75□□□□□ -2.29
SMC3Q9UQE7 MIR6516-201ENST00000630554 81 ntBASIC0.75□□□□□ -2.29
SMC3Q9UQE7 AL442644.1-201ENST00000454390 3105 ntBASIC0.74□□□□□ -2.29
SMC3Q9UQE7 SNORA25.1-201ENST00000362326 128 ntBASIC0.74□□□□□ -2.29
SMC3Q9UQE7 Y_RNA.24-201ENST00000362508 103 ntBASIC0.74□□□□□ -2.29
SMC3Q9UQE7 Y_RNA.237-201ENST00000364439 102 ntBASIC0.74□□□□□ -2.29
SMC3Q9UQE7 Y_RNA.483-201ENST00000384380 101 ntBASIC0.74□□□□□ -2.29
SMC3Q9UQE7 MIR520E-201ENST00000384867 87 ntBASIC0.74□□□□□ -2.29
SMC3Q9UQE7 MT-TW-201ENST00000387382 68 ntBASIC0.74□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms