Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 Y_RNA.713-201ENST00000517013 96 ntBASIC0.51□□□□□ -2.33
NPIPA1Q9UND3 MIR548AO-201ENST00000579992 96 ntBASIC0.51□□□□□ -2.33
NPIPA1Q9UND3 AC008507.4-201ENST00000585464 127 ntBASIC0.51□□□□□ -2.33
NPIPA1Q9UND3 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.51□□□□□ -2.33
NPIPA1Q9UND3 AL606534.2-204ENST00000635008 178 ntBASIC0.51□□□□□ -2.33
NPIPA1Q9UND3 MIR5087-201ENST00000635826 76 ntBASIC0.51□□□□□ -2.33
NPIPA1Q9UND3 Y_RNA.383-201ENST00000383855 97 ntBASIC0.5□□□□□ -2.33
NPIPA1Q9UND3 RNU2-14P-201ENST00000411053 191 ntBASIC0.5□□□□□ -2.33
NPIPA1Q9UND3 AC092628.1-201ENST00000436250 252 ntBASIC0.5□□□□□ -2.33
NPIPA1Q9UND3 POLR2KP2-201ENST00000438155 177 ntBASIC0.5□□□□□ -2.33
NPIPA1Q9UND3 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC0.5□□□□□ -2.33
NPIPA1Q9UND3 AC010655.3-201ENST00000478818 450 ntBASIC0.5□□□□□ -2.33
NPIPA1Q9UND3 RNU6-976P-201ENST00000516086 111 ntBASIC0.5□□□□□ -2.33
NPIPA1Q9UND3 RNU6-496P-201ENST00000516145 99 ntBASIC0.5□□□□□ -2.33
NPIPA1Q9UND3 MIR1273G-201ENST00000577677 100 ntBASIC0.5□□□□□ -2.33
NPIPA1Q9UND3 MIR4791-201ENST00000607666 84 ntBASIC0.5□□□□□ -2.33
NPIPA1Q9UND3 MTND1P7-201ENST00000632801 297 ntBASIC0.5□□□□□ -2.33
NPIPA1Q9UND3 RNU4-80P-201ENST00000363200 141 ntBASIC0.49□□□□□ -2.33
NPIPA1Q9UND3 Y_RNA.813-201ENST00000364639 102 ntBASIC0.49□□□□□ -2.33
NPIPA1Q9UND3 RNY3-201ENST00000365484 102 ntBASIC0.49□□□□□ -2.33
NPIPA1Q9UND3 RNU6-945P-201ENST00000383947 107 ntBASIC0.49□□□□□ -2.33
NPIPA1Q9UND3 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.49□□□□□ -2.33
NPIPA1Q9UND3 AC236972.2-201ENST00000434979 310 ntBASIC0.49□□□□□ -2.33
NPIPA1Q9UND3 U8.20-201ENST00000459445 131 ntBASIC0.49□□□□□ -2.33
NPIPA1Q9UND3 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.49□□□□□ -2.33
NPIPA1Q9UND3 AC104695.3-201ENST00000604052 296 ntBASIC0.49□□□□□ -2.33
NPIPA1Q9UND3 SNORD58B-201ENST00000607313 66 ntBASIC0.49□□□□□ -2.33
NPIPA1Q9UND3 Y_RNA.168-201ENST00000363740 102 ntBASIC0.48□□□□□ -2.33
NPIPA1Q9UND3 Y_RNA.471-201ENST00000384312 102 ntBASIC0.48□□□□□ -2.33
NPIPA1Q9UND3 Y_RNA.537-201ENST00000384626 109 ntBASIC0.48□□□□□ -2.33
NPIPA1Q9UND3 AL603910.2-201ENST00000407268 136 ntBASIC0.48□□□□□ -2.33
NPIPA1Q9UND3 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.48□□□□□ -2.33
NPIPA1Q9UND3 RNU6-1007P-201ENST00000516586 107 ntBASIC0.48□□□□□ -2.33
NPIPA1Q9UND3 AP003484.1-201ENST00000530974 250 ntBASIC0.48□□□□□ -2.33
NPIPA1Q9UND3 AC018659.1-201ENST00000551083 169 ntBASIC0.48□□□□□ -2.33
NPIPA1Q9UND3 Z83818.1-201ENST00000603584 150 ntBASIC0.48□□□□□ -2.33
NPIPA1Q9UND3 AC010487.4-201ENST00000637027 61 ntBASIC0.48□□□□□ -2.33
NPIPA1Q9UND3 Y_RNA.5-201ENST00000362334 102 ntBASIC0.47□□□□□ -2.33
NPIPA1Q9UND3 RNU6-801P-201ENST00000364087 105 ntBASIC0.47□□□□□ -2.33
NPIPA1Q9UND3 RNU4-50P-201ENST00000364361 141 ntBASIC0.47□□□□□ -2.33
NPIPA1Q9UND3 Y_RNA.242-201ENST00000364473 110 ntBASIC0.47□□□□□ -2.33
NPIPA1Q9UND3 Y_RNA.263-201ENST00000364659 114 ntBASIC0.47□□□□□ -2.33
NPIPA1Q9UND3 Y_RNA.286-201ENST00000364813 102 ntBASIC0.47□□□□□ -2.33
NPIPA1Q9UND3 Y_RNA.303-201ENST00000364998 94 ntBASIC0.47□□□□□ -2.33
NPIPA1Q9UND3 SNORA1.2-201ENST00000365189 134 ntBASIC0.47□□□□□ -2.33
NPIPA1Q9UND3 Y_RNA.356-201ENST00000365475 113 ntBASIC0.47□□□□□ -2.33
NPIPA1Q9UND3 RNU6-205P-201ENST00000390858 107 ntBASIC0.47□□□□□ -2.33
NPIPA1Q9UND3 RNU6-1009P-201ENST00000390996 107 ntBASIC0.47□□□□□ -2.33
NPIPA1Q9UND3 SCARNA8-201ENST00000515924 131 ntBASIC0.47□□□□□ -2.33
NPIPA1Q9UND3 RNU6-875P-201ENST00000516488 106 ntBASIC0.47□□□□□ -2.33
NPIPA1Q9UND3 AC005357.1-201ENST00000588399 301 ntBASIC0.47□□□□□ -2.33
NPIPA1Q9UND3 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC0.47□□□□□ -2.33
NPIPA1Q9UND3 RNU6-674P-201ENST00000363831 107 ntBASIC0.46□□□□□ -2.34
NPIPA1Q9UND3 RNY1P8-201ENST00000383970 114 ntBASIC0.46□□□□□ -2.34
NPIPA1Q9UND3 SNORA72.4-201ENST00000384174 132 ntBASIC0.46□□□□□ -2.34
NPIPA1Q9UND3 Y_RNA.529-201ENST00000384586 119 ntBASIC0.46□□□□□ -2.34
NPIPA1Q9UND3 RNU6-1248P-201ENST00000391096 64 ntBASIC0.46□□□□□ -2.34
NPIPA1Q9UND3 AC114737.2-201ENST00000421583 173 ntBASIC0.46□□□□□ -2.34
NPIPA1Q9UND3 snoU13.21-201ENST00000459368 105 ntBASIC0.46□□□□□ -2.34
NPIPA1Q9UND3 SEPT14P8-201ENST00000508026 178 ntBASIC0.46□□□□□ -2.34
NPIPA1Q9UND3 RNU6-475P-201ENST00000516073 104 ntBASIC0.46□□□□□ -2.34
NPIPA1Q9UND3 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.46□□□□□ -2.34
NPIPA1Q9UND3 AC006157.1-201ENST00000611750 366 ntBASIC0.46□□□□□ -2.34
NPIPA1Q9UND3 AC006441.5-201ENST00000612680 209 ntBASIC0.46□□□□□ -2.34
NPIPA1Q9UND3 AL589743.1-201ENST00000551932 2712 ntBASIC0.46□□□□□ -2.34
NPIPA1Q9UND3 Y_RNA.58-201ENST00000362807 102 ntBASIC0.45□□□□□ -2.34
NPIPA1Q9UND3 Y_RNA.154-201ENST00000363624 102 ntBASIC0.45□□□□□ -2.34
NPIPA1Q9UND3 RNY3P1-201ENST00000365085 102 ntBASIC0.45□□□□□ -2.34
NPIPA1Q9UND3 SNORA26.5-201ENST00000391215 123 ntBASIC0.45□□□□□ -2.34
NPIPA1Q9UND3 RNU6-847P-201ENST00000411115 108 ntBASIC0.45□□□□□ -2.34
NPIPA1Q9UND3 AC015818.7-201ENST00000428754 109 ntBASIC0.45□□□□□ -2.34
NPIPA1Q9UND3 AC087499.7-201ENST00000441958 109 ntBASIC0.45□□□□□ -2.34
NPIPA1Q9UND3 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.45□□□□□ -2.34
NPIPA1Q9UND3 SNORD11-201ENST00000459124 84 ntBASIC0.45□□□□□ -2.34
NPIPA1Q9UND3 AC040926.1-201ENST00000530195 238 ntBASIC0.45□□□□□ -2.34
NPIPA1Q9UND3 AP000753.3-201ENST00000604083 169 ntBASIC0.45□□□□□ -2.34
NPIPA1Q9UND3 SNORD113-5-201ENST00000607261 78 ntBASIC0.45□□□□□ -2.34
NPIPA1Q9UND3 AC243994.1-201ENST00000618627 109 ntBASIC0.45□□□□□ -2.34
NPIPA1Q9UND3 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.45□□□□□ -2.34
NPIPA1Q9UND3 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.44□□□□□ -2.34
NPIPA1Q9UND3 Y_RNA.315-201ENST00000365117 102 ntBASIC0.44□□□□□ -2.34
NPIPA1Q9UND3 RNU6-934P-201ENST00000365154 107 ntBASIC0.44□□□□□ -2.34
NPIPA1Q9UND3 Y_RNA.376-201ENST00000365638 108 ntBASIC0.44□□□□□ -2.34
NPIPA1Q9UND3 RNU6-1237P-201ENST00000384777 107 ntBASIC0.44□□□□□ -2.34
NPIPA1Q9UND3 MIR520F-201ENST00000384824 87 ntBASIC0.44□□□□□ -2.34
NPIPA1Q9UND3 SNORD83.1-201ENST00000411362 77 ntBASIC0.44□□□□□ -2.34
NPIPA1Q9UND3 AL157398.1-201ENST00000452981 186 ntBASIC0.44□□□□□ -2.34
NPIPA1Q9UND3 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC0.44□□□□□ -2.34
NPIPA1Q9UND3 RNU4-57P-201ENST00000515980 135 ntBASIC0.44□□□□□ -2.34
NPIPA1Q9UND3 RNU6-977P-201ENST00000516411 103 ntBASIC0.44□□□□□ -2.34
NPIPA1Q9UND3 PART1_1.1-201ENST00000611761 217 ntBASIC0.44□□□□□ -2.34
NPIPA1Q9UND3 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.43□□□□□ -2.34
NPIPA1Q9UND3 MIR377-201ENST00000362145 69 ntBASIC0.43□□□□□ -2.34
NPIPA1Q9UND3 SNORD45.3-201ENST00000363836 72 ntBASIC0.43□□□□□ -2.34
NPIPA1Q9UND3 MIR520H-201ENST00000385126 88 ntBASIC0.43□□□□□ -2.34
NPIPA1Q9UND3 RNU6-130P-201ENST00000411112 103 ntBASIC0.43□□□□□ -2.34
NPIPA1Q9UND3 MTND5P20-201ENST00000448677 143 ntBASIC0.43□□□□□ -2.34
NPIPA1Q9UND3 RN7SKP12-201ENST00000516275 143 ntBASIC0.43□□□□□ -2.34
NPIPA1Q9UND3 RNU6-1046P-201ENST00000516538 107 ntBASIC0.43□□□□□ -2.34
NPIPA1Q9UND3 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms