Protein–RNA interactions for Protein: Q9UFN0

NIPSNAP3A, Protein NipSnap homolog 3A, humanhuman

Predicted RBP Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP3AQ9UFN0 AC103810.8-201ENST00000607347 118 ntBASIC1.91□□□□□ -2.1
NIPSNAP3AQ9UFN0 MTND1P7-201ENST00000632801 297 ntBASIC1.91□□□□□ -2.1
NIPSNAP3AQ9UFN0 MIR3658-201ENST00000636291 56 ntBASIC1.91□□□□□ -2.1
NIPSNAP3AQ9UFN0 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.1
NIPSNAP3AQ9UFN0 RNU6-199P-201ENST00000362954 107 ntBASIC1.9□□□□□ -2.11
NIPSNAP3AQ9UFN0 RNU6-888P-201ENST00000363010 101 ntBASIC1.9□□□□□ -2.11
NIPSNAP3AQ9UFN0 Y_RNA.170-201ENST00000363746 110 ntBASIC1.9□□□□□ -2.11
NIPSNAP3AQ9UFN0 RNU6-151P-201ENST00000364158 107 ntBASIC1.9□□□□□ -2.11
NIPSNAP3AQ9UFN0 RNU6-978P-201ENST00000364371 103 ntBASIC1.9□□□□□ -2.11
NIPSNAP3AQ9UFN0 SNORA25.7-201ENST00000364375 127 ntBASIC1.9□□□□□ -2.11
NIPSNAP3AQ9UFN0 AL161935.2-201ENST00000414627 60 ntBASIC1.9□□□□□ -2.11
NIPSNAP3AQ9UFN0 AC090142.3-201ENST00000519012 385 ntBASIC1.9□□□□□ -2.11
NIPSNAP3AQ9UFN0 AC007751.1-201ENST00000529260 376 ntBASIC1.9□□□□□ -2.11
NIPSNAP3AQ9UFN0 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.9□□□□□ -2.11
NIPSNAP3AQ9UFN0 Y_RNA.783-201ENST00000613546 102 ntBASIC1.9□□□□□ -2.11
NIPSNAP3AQ9UFN0 MIR6844-201ENST00000637122 62 ntBASIC1.9□□□□□ -2.11
NIPSNAP3AQ9UFN0 RNU6-457P-201ENST00000363999 107 ntBASIC1.89□□□□□ -2.11
NIPSNAP3AQ9UFN0 Y_RNA.547-201ENST00000384654 119 ntBASIC1.89□□□□□ -2.11
NIPSNAP3AQ9UFN0 MIR136-201ENST00000385207 82 ntBASIC1.89□□□□□ -2.11
NIPSNAP3AQ9UFN0 RN7SKP223-201ENST00000410582 62 ntBASIC1.89□□□□□ -2.11
NIPSNAP3AQ9UFN0 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
NIPSNAP3AQ9UFN0 HMGN2P23-201ENST00000456759 269 ntBASIC1.89□□□□□ -2.11
NIPSNAP3AQ9UFN0 RN7SL274P-201ENST00000492268 272 ntBASIC1.89□□□□□ -2.11
NIPSNAP3AQ9UFN0 SNORA44.1-201ENST00000517031 108 ntBASIC1.89□□□□□ -2.11
NIPSNAP3AQ9UFN0 Y_RNA.778-201ENST00000620203 90 ntBASIC1.89□□□□□ -2.11
NIPSNAP3AQ9UFN0 RNU4-11P-201ENST00000365287 132 ntBASIC1.88□□□□□ -2.11
NIPSNAP3AQ9UFN0 MIR526A1-201ENST00000384897 85 ntBASIC1.88□□□□□ -2.11
NIPSNAP3AQ9UFN0 MIR518F-201ENST00000384973 87 ntBASIC1.88□□□□□ -2.11
NIPSNAP3AQ9UFN0 MIR30A-201ENST00000385092 71 ntBASIC1.88□□□□□ -2.11
NIPSNAP3AQ9UFN0 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.88□□□□□ -2.11
NIPSNAP3AQ9UFN0 snoU13.9-201ENST00000458927 103 ntBASIC1.88□□□□□ -2.11
NIPSNAP3AQ9UFN0 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.88□□□□□ -2.11
NIPSNAP3AQ9UFN0 IGKV3-31-201ENST00000523109 329 ntBASIC1.88□□□□□ -2.11
NIPSNAP3AQ9UFN0 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.88□□□□□ -2.11
NIPSNAP3AQ9UFN0 SNORA77B-201ENST00000578179 125 ntBASIC1.88□□□□□ -2.11
NIPSNAP3AQ9UFN0 MIR4648-201ENST00000580107 72 ntBASIC1.88□□□□□ -2.11
NIPSNAP3AQ9UFN0 MIR3129-201ENST00000581095 76 ntBASIC1.88□□□□□ -2.11
NIPSNAP3AQ9UFN0 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
NIPSNAP3AQ9UFN0 RNU6-597P-201ENST00000365620 102 ntBASIC1.87□□□□□ -2.11
NIPSNAP3AQ9UFN0 RNU6-1336P-201ENST00000383886 109 ntBASIC1.87□□□□□ -2.11
NIPSNAP3AQ9UFN0 SNORA1-201ENST00000384107 130 ntBASIC1.87□□□□□ -2.11
NIPSNAP3AQ9UFN0 MIR548A2-201ENST00000384956 97 ntBASIC1.87□□□□□ -2.11
NIPSNAP3AQ9UFN0 MIR1261-201ENST00000408659 82 ntBASIC1.87□□□□□ -2.11
NIPSNAP3AQ9UFN0 RNU2-40P-201ENST00000410833 196 ntBASIC1.87□□□□□ -2.11
NIPSNAP3AQ9UFN0 CYCSP49-201ENST00000420810 319 ntBASIC1.87□□□□□ -2.11
NIPSNAP3AQ9UFN0 RNU1-41P-201ENST00000516161 162 ntBASIC1.87□□□□□ -2.11
NIPSNAP3AQ9UFN0 RNU1-48P-201ENST00000516400 162 ntBASIC1.87□□□□□ -2.11
NIPSNAP3AQ9UFN0 FAM106DP-201ENST00000586416 501 ntBASIC1.87□□□□□ -2.11
NIPSNAP3AQ9UFN0 MIR8063-201ENST00000621930 81 ntBASIC1.87□□□□□ -2.11
NIPSNAP3AQ9UFN0 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
NIPSNAP3AQ9UFN0 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
NIPSNAP3AQ9UFN0 RNU6-774P-201ENST00000363238 107 ntBASIC1.86□□□□□ -2.11
NIPSNAP3AQ9UFN0 SNORD115-28-201ENST00000363931 81 ntBASIC1.86□□□□□ -2.11
NIPSNAP3AQ9UFN0 SNORA75.5-201ENST00000391291 81 ntBASIC1.86□□□□□ -2.11
NIPSNAP3AQ9UFN0 SUMO2P12-201ENST00000405924 140 ntBASIC1.86□□□□□ -2.11
NIPSNAP3AQ9UFN0 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.86□□□□□ -2.11
NIPSNAP3AQ9UFN0 AL445646.1-201ENST00000431784 216 ntBASIC1.86□□□□□ -2.11
NIPSNAP3AQ9UFN0 AC005908.1-201ENST00000468701 347 ntBASIC1.86□□□□□ -2.11
NIPSNAP3AQ9UFN0 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.86□□□□□ -2.11
NIPSNAP3AQ9UFN0 RNU7-200P-201ENST00000516105 62 ntBASIC1.86□□□□□ -2.11
NIPSNAP3AQ9UFN0 SNORA18.4-201ENST00000516440 124 ntBASIC1.86□□□□□ -2.11
NIPSNAP3AQ9UFN0 MIR3646-201ENST00000578301 84 ntBASIC1.86□□□□□ -2.11
NIPSNAP3AQ9UFN0 MIR5089-201ENST00000580047 84 ntBASIC1.86□□□□□ -2.11
NIPSNAP3AQ9UFN0 AL096840.1-201ENST00000603287 93 ntBASIC1.86□□□□□ -2.11
NIPSNAP3AQ9UFN0 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.86□□□□□ -2.11
NIPSNAP3AQ9UFN0 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
NIPSNAP3AQ9UFN0 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
NIPSNAP3AQ9UFN0 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
NIPSNAP3AQ9UFN0 Y_RNA.542-201ENST00000384641 111 ntBASIC1.85□□□□□ -2.11
NIPSNAP3AQ9UFN0 MIR548M-201ENST00000408260 86 ntBASIC1.85□□□□□ -2.11
NIPSNAP3AQ9UFN0 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.85□□□□□ -2.11
NIPSNAP3AQ9UFN0 AC092991.1-201ENST00000477176 376 ntBASIC1.85□□□□□ -2.11
NIPSNAP3AQ9UFN0 RNU6-830P-201ENST00000516353 107 ntBASIC1.85□□□□□ -2.11
NIPSNAP3AQ9UFN0 AC015688.6-201ENST00000577737 104 ntBASIC1.85□□□□□ -2.11
NIPSNAP3AQ9UFN0 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.85□□□□□ -2.11
NIPSNAP3AQ9UFN0 AL365205.2-201ENST00000594586 68 ntBASIC1.85□□□□□ -2.11
NIPSNAP3AQ9UFN0 SNRPGP19-201ENST00000603826 189 ntBASIC1.85□□□□□ -2.11
NIPSNAP3AQ9UFN0 AC134878.1-201ENST00000619901 243 ntBASIC1.85□□□□□ -2.11
NIPSNAP3AQ9UFN0 AC092881.1-201ENST00000638218 2733 ntBASIC1.84□□□□□ -2.11
NIPSNAP3AQ9UFN0 RNU6-1082P-201ENST00000364574 107 ntBASIC1.84□□□□□ -2.11
NIPSNAP3AQ9UFN0 RNU6-818P-201ENST00000364837 108 ntBASIC1.84□□□□□ -2.11
NIPSNAP3AQ9UFN0 Y_RNA.400-201ENST00000383963 111 ntBASIC1.84□□□□□ -2.11
NIPSNAP3AQ9UFN0 Y_RNA.506-201ENST00000384494 102 ntBASIC1.84□□□□□ -2.11
NIPSNAP3AQ9UFN0 AL023284.1-201ENST00000403956 276 ntBASIC1.84□□□□□ -2.11
NIPSNAP3AQ9UFN0 RNU6-588P-201ENST00000410281 105 ntBASIC1.84□□□□□ -2.11
NIPSNAP3AQ9UFN0 AF228730.3-201ENST00000436691 102 ntBASIC1.84□□□□□ -2.11
NIPSNAP3AQ9UFN0 SUMO1P3-201ENST00000439961 304 ntBASIC1.84□□□□□ -2.11
NIPSNAP3AQ9UFN0 HSPE1P24-201ENST00000450782 238 ntBASIC1.84□□□□□ -2.11
NIPSNAP3AQ9UFN0 RNU6-322P-201ENST00000516010 103 ntBASIC1.84□□□□□ -2.11
NIPSNAP3AQ9UFN0 RNU6-917P-201ENST00000516294 104 ntBASIC1.84□□□□□ -2.11
NIPSNAP3AQ9UFN0 AC104984.5-201ENST00000586878 94 ntBASIC1.84□□□□□ -2.11
NIPSNAP3AQ9UFN0 Y_RNA.37-201ENST00000362606 108 ntBASIC1.83□□□□□ -2.12
NIPSNAP3AQ9UFN0 SNORA2.2-201ENST00000365473 135 ntBASIC1.83□□□□□ -2.12
NIPSNAP3AQ9UFN0 SNORA67.3-201ENST00000384366 140 ntBASIC1.83□□□□□ -2.12
NIPSNAP3AQ9UFN0 SNORA64-201ENST00000384674 134 ntBASIC1.83□□□□□ -2.12
NIPSNAP3AQ9UFN0 RNA5SP489-201ENST00000410986 109 ntBASIC1.83□□□□□ -2.12
NIPSNAP3AQ9UFN0 RNA5SP127-201ENST00000411051 133 ntBASIC1.83□□□□□ -2.12
NIPSNAP3AQ9UFN0 RNU6-346P-201ENST00000516288 111 ntBASIC1.83□□□□□ -2.12
NIPSNAP3AQ9UFN0 SNORA18.7-201ENST00000516910 131 ntBASIC1.83□□□□□ -2.12
NIPSNAP3AQ9UFN0 AC112693.2-201ENST00000556538 232 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 194.9 ms