Protein–RNA interactions for Protein: Q9NZ94

NLGN3, Neuroligin-3, humanhuman

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLGN3Q9NZ94 AL442644.1-201ENST00000454390 3105 ntBASIC1.15□□□□□ -2.22
NLGN3Q9NZ94 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.15□□□□□ -2.23
NLGN3Q9NZ94 RNU6-1084P-201ENST00000362498 107 ntBASIC1.15□□□□□ -2.23
NLGN3Q9NZ94 snoU2-30.1-201ENST00000365012 70 ntBASIC1.15□□□□□ -2.23
NLGN3Q9NZ94 Y_RNA.336-201ENST00000365307 109 ntBASIC1.15□□□□□ -2.23
NLGN3Q9NZ94 SNORA2.2-201ENST00000365473 135 ntBASIC1.15□□□□□ -2.23
NLGN3Q9NZ94 RNU6-144P-201ENST00000383951 107 ntBASIC1.15□□□□□ -2.23
NLGN3Q9NZ94 Y_RNA.572-201ENST00000384757 98 ntBASIC1.15□□□□□ -2.23
NLGN3Q9NZ94 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
NLGN3Q9NZ94 RPS29P29-201ENST00000456396 171 ntBASIC1.15□□□□□ -2.23
NLGN3Q9NZ94 SNORD127-201ENST00000458892 86 ntBASIC1.15□□□□□ -2.23
NLGN3Q9NZ94 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.15□□□□□ -2.23
NLGN3Q9NZ94 Y_RNA.668-201ENST00000516233 93 ntBASIC1.15□□□□□ -2.23
NLGN3Q9NZ94 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.15□□□□□ -2.23
NLGN3Q9NZ94 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.15□□□□□ -2.23
NLGN3Q9NZ94 FAM106DP-201ENST00000586416 501 ntBASIC1.15□□□□□ -2.23
NLGN3Q9NZ94 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
NLGN3Q9NZ94 Y_RNA.82-201ENST00000363000 102 ntBASIC1.14□□□□□ -2.23
NLGN3Q9NZ94 Y_RNA.92-201ENST00000363043 102 ntBASIC1.14□□□□□ -2.23
NLGN3Q9NZ94 Y_RNA.235-201ENST00000364412 102 ntBASIC1.14□□□□□ -2.23
NLGN3Q9NZ94 Y_RNA.293-201ENST00000364908 93 ntBASIC1.14□□□□□ -2.23
NLGN3Q9NZ94 Y_RNA.306-201ENST00000365015 102 ntBASIC1.14□□□□□ -2.23
NLGN3Q9NZ94 Y_RNA.312-201ENST00000365089 102 ntBASIC1.14□□□□□ -2.23
NLGN3Q9NZ94 Y_RNA.322-201ENST00000365151 102 ntBASIC1.14□□□□□ -2.23
NLGN3Q9NZ94 AC245047.8-201ENST00000456455 284 ntBASIC1.14□□□□□ -2.23
NLGN3Q9NZ94 Y_RNA.650-201ENST00000459002 102 ntBASIC1.14□□□□□ -2.23
NLGN3Q9NZ94 AC087343.1-201ENST00000477341 475 ntBASIC1.14□□□□□ -2.23
NLGN3Q9NZ94 Y_RNA.777-201ENST00000516982 102 ntBASIC1.14□□□□□ -2.23
NLGN3Q9NZ94 AC090821.2-201ENST00000523552 176 ntBASIC1.14□□□□□ -2.23
NLGN3Q9NZ94 MIR2681-201ENST00000581814 105 ntBASIC1.14□□□□□ -2.23
NLGN3Q9NZ94 MIR4295-201ENST00000585286 85 ntBASIC1.14□□□□□ -2.23
NLGN3Q9NZ94 Y_RNA.771-201ENST00000598668 102 ntBASIC1.14□□□□□ -2.23
NLGN3Q9NZ94 Y_RNA.789-201ENST00000622480 102 ntBASIC1.14□□□□□ -2.23
NLGN3Q9NZ94 Y_RNA.562-201ENST00000384695 113 ntBASIC1.13□□□□□ -2.23
NLGN3Q9NZ94 MIR452-201ENST00000385020 85 ntBASIC1.13□□□□□ -2.23
NLGN3Q9NZ94 AL451046.2-201ENST00000403074 277 ntBASIC1.13□□□□□ -2.23
NLGN3Q9NZ94 MTND1P19-201ENST00000511780 315 ntBASIC1.13□□□□□ -2.23
NLGN3Q9NZ94 RN7SKP88-201ENST00000516847 250 ntBASIC1.13□□□□□ -2.23
NLGN3Q9NZ94 AC100767.1-201ENST00000528178 123 ntBASIC1.13□□□□□ -2.23
NLGN3Q9NZ94 AC087685.1-201ENST00000587507 141 ntBASIC1.13□□□□□ -2.23
NLGN3Q9NZ94 GHRLOS.1-201ENST00000610995 70 ntBASIC1.13□□□□□ -2.23
NLGN3Q9NZ94 7SK.8-201ENST00000612110 250 ntBASIC1.13□□□□□ -2.23
NLGN3Q9NZ94 7SK.11-201ENST00000615477 250 ntBASIC1.13□□□□□ -2.23
NLGN3Q9NZ94 RMST_2.1-201ENST00000617263 136 ntBASIC1.13□□□□□ -2.23
NLGN3Q9NZ94 7SK.13-201ENST00000622040 250 ntBASIC1.13□□□□□ -2.23
NLGN3Q9NZ94 U6.104-201ENST00000637979 90 ntBASIC1.13□□□□□ -2.23
NLGN3Q9NZ94 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.13□□□□□ -2.23
NLGN3Q9NZ94 MIR367-201ENST00000362299 68 ntBASIC1.12□□□□□ -2.23
NLGN3Q9NZ94 Y_RNA.14-201ENST00000362415 103 ntBASIC1.12□□□□□ -2.23
NLGN3Q9NZ94 RNA5SP327-201ENST00000362494 101 ntBASIC1.12□□□□□ -2.23
NLGN3Q9NZ94 SNORD114-27-201ENST00000363766 70 ntBASIC1.12□□□□□ -2.23
NLGN3Q9NZ94 SNORD14E-201ENST00000364009 85 ntBASIC1.12□□□□□ -2.23
NLGN3Q9NZ94 Y_RNA.288-201ENST00000364854 92 ntBASIC1.12□□□□□ -2.23
NLGN3Q9NZ94 Y_RNA.352-201ENST00000365439 102 ntBASIC1.12□□□□□ -2.23
NLGN3Q9NZ94 RNU6-574P-201ENST00000384265 107 ntBASIC1.12□□□□□ -2.23
NLGN3Q9NZ94 MIR222-201ENST00000384992 110 ntBASIC1.12□□□□□ -2.23
NLGN3Q9NZ94 MIR618-201ENST00000385287 98 ntBASIC1.12□□□□□ -2.23
NLGN3Q9NZ94 MIR526A2-201ENST00000390198 65 ntBASIC1.12□□□□□ -2.23
NLGN3Q9NZ94 HMGN2P32-201ENST00000444648 269 ntBASIC1.12□□□□□ -2.23
NLGN3Q9NZ94 snoU13.25-201ENST00000458945 104 ntBASIC1.12□□□□□ -2.23
NLGN3Q9NZ94 MIR4724-201ENST00000579485 89 ntBASIC1.12□□□□□ -2.23
NLGN3Q9NZ94 MIR4503-201ENST00000582187 83 ntBASIC1.12□□□□□ -2.23
NLGN3Q9NZ94 MIR4282-201ENST00000583613 67 ntBASIC1.12□□□□□ -2.23
NLGN3Q9NZ94 AC011921.3-201ENST00000605540 361 ntBASIC1.12□□□□□ -2.23
NLGN3Q9NZ94 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.12□□□□□ -2.23
NLGN3Q9NZ94 MIR6734-201ENST00000621166 68 ntBASIC1.12□□□□□ -2.23
NLGN3Q9NZ94 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.11□□□□□ -2.23
NLGN3Q9NZ94 Y_RNA.76-201ENST00000362931 109 ntBASIC1.11□□□□□ -2.23
NLGN3Q9NZ94 RNU6-268P-201ENST00000364174 107 ntBASIC1.11□□□□□ -2.23
NLGN3Q9NZ94 Y_RNA.277-201ENST00000364754 102 ntBASIC1.11□□□□□ -2.23
NLGN3Q9NZ94 RNU6-1132P-201ENST00000459214 107 ntBASIC1.11□□□□□ -2.23
NLGN3Q9NZ94 RNU6-322P-201ENST00000516010 103 ntBASIC1.11□□□□□ -2.23
NLGN3Q9NZ94 SNORD116-28-201ENST00000516123 91 ntBASIC1.11□□□□□ -2.23
NLGN3Q9NZ94 Y_RNA.680-201ENST00000516441 93 ntBASIC1.11□□□□□ -2.23
NLGN3Q9NZ94 Y_RNA.714-201ENST00000517065 90 ntBASIC1.11□□□□□ -2.23
NLGN3Q9NZ94 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.11□□□□□ -2.23
NLGN3Q9NZ94 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
NLGN3Q9NZ94 AL049861.1-201ENST00000603130 150 ntBASIC1.11□□□□□ -2.23
NLGN3Q9NZ94 AL096861.1-201ENST00000610899 123 ntBASIC1.11□□□□□ -2.23
NLGN3Q9NZ94 Y_RNA.802-201ENST00000614892 130 ntBASIC1.11□□□□□ -2.23
NLGN3Q9NZ94 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.1□□□□□ -2.23
NLGN3Q9NZ94 Y_RNA.24-201ENST00000362508 103 ntBASIC1.1□□□□□ -2.23
NLGN3Q9NZ94 Y_RNA.590-201ENST00000410140 107 ntBASIC1.1□□□□□ -2.23
NLGN3Q9NZ94 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.1□□□□□ -2.23
NLGN3Q9NZ94 RNU7-40P-201ENST00000516397 64 ntBASIC1.1□□□□□ -2.23
NLGN3Q9NZ94 SNORD111.1-201ENST00000516421 86 ntBASIC1.1□□□□□ -2.23
NLGN3Q9NZ94 MIR3192-201ENST00000584920 77 ntBASIC1.1□□□□□ -2.23
NLGN3Q9NZ94 uc_338.4-201ENST00000616635 176 ntBASIC1.1□□□□□ -2.23
NLGN3Q9NZ94 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.1□□□□□ -2.23
NLGN3Q9NZ94 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.1□□□□□ -2.23
NLGN3Q9NZ94 Y_RNA.54-201ENST00000362766 105 ntBASIC1.09□□□□□ -2.23
NLGN3Q9NZ94 Y_RNA.193-201ENST00000363979 102 ntBASIC1.09□□□□□ -2.23
NLGN3Q9NZ94 Y_RNA.229-201ENST00000364347 113 ntBASIC1.09□□□□□ -2.23
NLGN3Q9NZ94 Y_RNA.304-201ENST00000365011 112 ntBASIC1.09□□□□□ -2.23
NLGN3Q9NZ94 RNU6-442P-201ENST00000383968 104 ntBASIC1.09□□□□□ -2.23
NLGN3Q9NZ94 Y_RNA.556-201ENST00000384677 113 ntBASIC1.09□□□□□ -2.23
NLGN3Q9NZ94 MIR520E-201ENST00000384867 87 ntBASIC1.09□□□□□ -2.23
NLGN3Q9NZ94 MIR626-201ENST00000385032 94 ntBASIC1.09□□□□□ -2.23
NLGN3Q9NZ94 MIR136-201ENST00000385207 82 ntBASIC1.09□□□□□ -2.23
NLGN3Q9NZ94 RNA5SP496-201ENST00000391240 109 ntBASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 169.3 ms