Protein–RNA interactions for Protein: Q9NYD6

HOXC10, Homeobox protein Hox-C10, humanhuman

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10Q9NYD6 SNORA1.2-201ENST00000365189 134 ntBASIC0.51□□□□□ -2.33
HOXC10Q9NYD6 RNU6-396P-201ENST00000365369 105 ntBASIC0.51□□□□□ -2.33
HOXC10Q9NYD6 VTRNA1-3-201ENST00000365645 89 ntBASIC0.51□□□□□ -2.33
HOXC10Q9NYD6 AL603910.2-201ENST00000407268 136 ntBASIC0.51□□□□□ -2.33
HOXC10Q9NYD6 SNORD99-201ENST00000408612 74 ntBASIC0.51□□□□□ -2.33
HOXC10Q9NYD6 SNORA36B-201ENST00000410438 131 ntBASIC0.51□□□□□ -2.33
HOXC10Q9NYD6 AL157398.1-201ENST00000452981 186 ntBASIC0.51□□□□□ -2.33
HOXC10Q9NYD6 AC067940.1-201ENST00000458411 300 ntBASIC0.51□□□□□ -2.33
HOXC10Q9NYD6 AC010655.3-201ENST00000478818 450 ntBASIC0.51□□□□□ -2.33
HOXC10Q9NYD6 SEPT14P8-201ENST00000508026 178 ntBASIC0.51□□□□□ -2.33
HOXC10Q9NYD6 RNU4-57P-201ENST00000515980 135 ntBASIC0.51□□□□□ -2.33
HOXC10Q9NYD6 RNU6-875P-201ENST00000516488 106 ntBASIC0.51□□□□□ -2.33
HOXC10Q9NYD6 SNORD113-5-201ENST00000607261 78 ntBASIC0.51□□□□□ -2.33
HOXC10Q9NYD6 RNU6-94P-201ENST00000607728 107 ntBASIC0.51□□□□□ -2.33
HOXC10Q9NYD6 Y_RNA.136-201ENST00000363444 102 ntBASIC0.5□□□□□ -2.33
HOXC10Q9NYD6 AC244098.3-201ENST00000424803 96 ntBASIC0.5□□□□□ -2.33
HOXC10Q9NYD6 AC236972.2-201ENST00000434979 310 ntBASIC0.5□□□□□ -2.33
HOXC10Q9NYD6 RNU7-141P-201ENST00000459304 62 ntBASIC0.5□□□□□ -2.33
HOXC10Q9NYD6 MIR330-201ENST00000362196 94 ntBASIC0.49□□□□□ -2.33
HOXC10Q9NYD6 Y_RNA.383-201ENST00000383855 97 ntBASIC0.49□□□□□ -2.33
HOXC10Q9NYD6 SNORA50A-201ENST00000384225 134 ntBASIC0.49□□□□□ -2.33
HOXC10Q9NYD6 RNU6-937P-201ENST00000384325 106 ntBASIC0.49□□□□□ -2.33
HOXC10Q9NYD6 RNU1-119P-201ENST00000391122 165 ntBASIC0.49□□□□□ -2.33
HOXC10Q9NYD6 MIR1302-11-201ENST00000408051 138 ntBASIC0.49□□□□□ -2.33
HOXC10Q9NYD6 MIR1302-9-201ENST00000408365 138 ntBASIC0.49□□□□□ -2.33
HOXC10Q9NYD6 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.49□□□□□ -2.33
HOXC10Q9NYD6 MIR1302-10-201ENST00000408734 138 ntBASIC0.49□□□□□ -2.33
HOXC10Q9NYD6 AL358176.2-201ENST00000425769 204 ntBASIC0.49□□□□□ -2.33
HOXC10Q9NYD6 AC093027.1-201ENST00000546698 429 ntBASIC0.49□□□□□ -2.33
HOXC10Q9NYD6 MIR1302-2-201ENST00000607096 138 ntBASIC0.49□□□□□ -2.33
HOXC10Q9NYD6 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.49□□□□□ -2.33
HOXC10Q9NYD6 RNU6-369P-201ENST00000362515 102 ntBASIC0.48□□□□□ -2.33
HOXC10Q9NYD6 Y_RNA.258-201ENST00000364613 105 ntBASIC0.48□□□□□ -2.33
HOXC10Q9NYD6 Y_RNA.303-201ENST00000364998 94 ntBASIC0.48□□□□□ -2.33
HOXC10Q9NYD6 RNY3-201ENST00000365484 102 ntBASIC0.48□□□□□ -2.33
HOXC10Q9NYD6 Y_RNA.376-201ENST00000365638 108 ntBASIC0.48□□□□□ -2.33
HOXC10Q9NYD6 RNU6-144P-201ENST00000383951 107 ntBASIC0.48□□□□□ -2.33
HOXC10Q9NYD6 SNORA24-201ENST00000384096 131 ntBASIC0.48□□□□□ -2.33
HOXC10Q9NYD6 RNU6-21P-201ENST00000384710 107 ntBASIC0.48□□□□□ -2.33
HOXC10Q9NYD6 SNORD105-201ENST00000386910 85 ntBASIC0.48□□□□□ -2.33
HOXC10Q9NYD6 MTCO2P33-201ENST00000402100 465 ntBASIC0.48□□□□□ -2.33
HOXC10Q9NYD6 RNU6-847P-201ENST00000411115 108 ntBASIC0.48□□□□□ -2.33
HOXC10Q9NYD6 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.48□□□□□ -2.33
HOXC10Q9NYD6 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC0.48□□□□□ -2.33
HOXC10Q9NYD6 AC082651.2-201ENST00000496833 166 ntBASIC0.48□□□□□ -2.33
HOXC10Q9NYD6 RNA5SP330-201ENST00000517096 96 ntBASIC0.48□□□□□ -2.33
HOXC10Q9NYD6 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
HOXC10Q9NYD6 AC005357.1-201ENST00000588399 301 ntBASIC0.48□□□□□ -2.33
HOXC10Q9NYD6 MIR4791-201ENST00000607666 84 ntBASIC0.48□□□□□ -2.33
HOXC10Q9NYD6 MIR8087-201ENST00000612745 78 ntBASIC0.48□□□□□ -2.33
HOXC10Q9NYD6 7SK.10-201ENST00000621414 298 ntBASIC0.48□□□□□ -2.33
HOXC10Q9NYD6 MTND1P7-201ENST00000632801 297 ntBASIC0.48□□□□□ -2.33
HOXC10Q9NYD6 Y_RNA.197-201ENST00000364004 102 ntBASIC0.47□□□□□ -2.33
HOXC10Q9NYD6 Y_RNA.315-201ENST00000365117 102 ntBASIC0.47□□□□□ -2.33
HOXC10Q9NYD6 Y_RNA.395-201ENST00000383945 109 ntBASIC0.47□□□□□ -2.33
HOXC10Q9NYD6 SNORA51.10-201ENST00000384418 136 ntBASIC0.47□□□□□ -2.33
HOXC10Q9NYD6 SNORD72-201ENST00000390994 80 ntBASIC0.47□□□□□ -2.33
HOXC10Q9NYD6 RNU2-14P-201ENST00000411053 191 ntBASIC0.47□□□□□ -2.33
HOXC10Q9NYD6 RNU6-130P-201ENST00000411112 103 ntBASIC0.47□□□□□ -2.33
HOXC10Q9NYD6 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.47□□□□□ -2.33
HOXC10Q9NYD6 RPL23AP91-201ENST00000569211 455 ntBASIC0.47□□□□□ -2.33
HOXC10Q9NYD6 MIR548AO-201ENST00000579992 96 ntBASIC0.47□□□□□ -2.33
HOXC10Q9NYD6 MIR3145-201ENST00000580727 82 ntBASIC0.47□□□□□ -2.33
HOXC10Q9NYD6 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.47□□□□□ -2.33
HOXC10Q9NYD6 PART1_1.1-201ENST00000611761 217 ntBASIC0.47□□□□□ -2.33
HOXC10Q9NYD6 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC0.47□□□□□ -2.33
HOXC10Q9NYD6 AC022140.2-201ENST00000623500 188 ntBASIC0.47□□□□□ -2.33
HOXC10Q9NYD6 MIR1-1-201ENST00000362147 71 ntBASIC0.46□□□□□ -2.34
HOXC10Q9NYD6 Y_RNA.143-201ENST00000363520 106 ntBASIC0.46□□□□□ -2.34
HOXC10Q9NYD6 SNORD18A-201ENST00000363753 72 ntBASIC0.46□□□□□ -2.34
HOXC10Q9NYD6 RNU6-899P-201ENST00000363947 107 ntBASIC0.46□□□□□ -2.34
HOXC10Q9NYD6 SNORA63.7-201ENST00000365579 123 ntBASIC0.46□□□□□ -2.34
HOXC10Q9NYD6 Y_RNA.471-201ENST00000384312 102 ntBASIC0.46□□□□□ -2.34
HOXC10Q9NYD6 MIR802-201ENST00000390235 94 ntBASIC0.46□□□□□ -2.34
HOXC10Q9NYD6 RNU6-1009P-201ENST00000390996 107 ntBASIC0.46□□□□□ -2.34
HOXC10Q9NYD6 SNORA26.5-201ENST00000391215 123 ntBASIC0.46□□□□□ -2.34
HOXC10Q9NYD6 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.46□□□□□ -2.34
HOXC10Q9NYD6 RNU4-30P-201ENST00000410245 143 ntBASIC0.46□□□□□ -2.34
HOXC10Q9NYD6 RNU6-994P-201ENST00000410507 111 ntBASIC0.46□□□□□ -2.34
HOXC10Q9NYD6 POLR2KP2-201ENST00000438155 177 ntBASIC0.46□□□□□ -2.34
HOXC10Q9NYD6 SCARNA8-201ENST00000515924 131 ntBASIC0.46□□□□□ -2.34
HOXC10Q9NYD6 RN7SKP12-201ENST00000516275 143 ntBASIC0.46□□□□□ -2.34
HOXC10Q9NYD6 RNU6-191P-201ENST00000516295 94 ntBASIC0.46□□□□□ -2.34
HOXC10Q9NYD6 AC040926.1-201ENST00000530195 238 ntBASIC0.46□□□□□ -2.34
HOXC10Q9NYD6 AL021707.8-201ENST00000609428 183 ntBASIC0.46□□□□□ -2.34
HOXC10Q9NYD6 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
HOXC10Q9NYD6 RNU4-80P-201ENST00000363200 141 ntBASIC0.45□□□□□ -2.34
HOXC10Q9NYD6 Y_RNA.115-201ENST00000363272 98 ntBASIC0.45□□□□□ -2.34
HOXC10Q9NYD6 Y_RNA.286-201ENST00000364813 102 ntBASIC0.45□□□□□ -2.34
HOXC10Q9NYD6 RNU6-945P-201ENST00000383947 107 ntBASIC0.45□□□□□ -2.34
HOXC10Q9NYD6 Y_RNA.418-201ENST00000384029 102 ntBASIC0.45□□□□□ -2.34
HOXC10Q9NYD6 SNORA2B-201ENST00000384583 137 ntBASIC0.45□□□□□ -2.34
HOXC10Q9NYD6 Y_RNA.529-201ENST00000384586 119 ntBASIC0.45□□□□□ -2.34
HOXC10Q9NYD6 RNU6-177P-201ENST00000411257 104 ntBASIC0.45□□□□□ -2.34
HOXC10Q9NYD6 MTND1P14-201ENST00000427400 950 ntBASIC0.45□□□□□ -2.34
HOXC10Q9NYD6 SNORD45.3-201ENST00000363836 72 ntBASIC0.44□□□□□ -2.34
HOXC10Q9NYD6 RNU6-1138P-201ENST00000365359 106 ntBASIC0.44□□□□□ -2.34
HOXC10Q9NYD6 RNA5SP496-201ENST00000391240 109 ntBASIC0.44□□□□□ -2.34
HOXC10Q9NYD6 MIR1278-201ENST00000408753 81 ntBASIC0.44□□□□□ -2.34
HOXC10Q9NYD6 Y_RNA.661-201ENST00000516003 99 ntBASIC0.44□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms