Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 AC084782.3-201ENST00000612282 578 ntBASIC0.05□□□□□ -2.4
CLN6Q9NWW5 AC138305.3-201ENST00000624988 240 ntBASIC0.05□□□□□ -2.4
CLN6Q9NWW5 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.05□□□□□ -2.4
CLN6Q9NWW5 RNU6-845P-201ENST00000362578 103 ntBASIC0.04□□□□□ -2.4
CLN6Q9NWW5 SNORD81.1-201ENST00000363064 77 ntBASIC0.04□□□□□ -2.4
CLN6Q9NWW5 SNORD118-201ENST00000363593 134 ntBASIC0.04□□□□□ -2.4
CLN6Q9NWW5 Y_RNA.241-201ENST00000364470 117 ntBASIC0.04□□□□□ -2.4
CLN6Q9NWW5 SNORA24-201ENST00000384096 131 ntBASIC0.04□□□□□ -2.4
CLN6Q9NWW5 Y_RNA.462-201ENST00000384268 102 ntBASIC0.04□□□□□ -2.4
CLN6Q9NWW5 SNORD38B-201ENST00000384690 67 ntBASIC0.04□□□□□ -2.4
CLN6Q9NWW5 RNU7-102P-201ENST00000458948 62 ntBASIC0.04□□□□□ -2.4
CLN6Q9NWW5 Y_RNA.653-201ENST00000459091 95 ntBASIC0.04□□□□□ -2.4
CLN6Q9NWW5 RNU6-863P-201ENST00000515989 104 ntBASIC0.04□□□□□ -2.4
CLN6Q9NWW5 AC006600.1-201ENST00000572529 153 ntBASIC0.04□□□□□ -2.4
CLN6Q9NWW5 AC005357.1-201ENST00000588399 301 ntBASIC0.04□□□□□ -2.4
CLN6Q9NWW5 VN1R91P-201ENST00000594377 169 ntBASIC0.04□□□□□ -2.4
CLN6Q9NWW5 AC008608.1-201ENST00000603910 127 ntBASIC0.04□□□□□ -2.4
CLN6Q9NWW5 Y_RNA.772-201ENST00000606692 102 ntBASIC0.04□□□□□ -2.4
CLN6Q9NWW5 uc_338.6-201ENST00000613544 171 ntBASIC0.04□□□□□ -2.4
CLN6Q9NWW5 MIR6740-201ENST00000618268 113 ntBASIC0.04□□□□□ -2.4
CLN6Q9NWW5 MIR6734-201ENST00000621166 68 ntBASIC0.04□□□□□ -2.4
CLN6Q9NWW5 SNORD38B-202ENST00000625943 69 ntBASIC0.04□□□□□ -2.4
CLN6Q9NWW5 MIR924-201ENST00000638017 53 ntBASIC0.04□□□□□ -2.4
CLN6Q9NWW5 RNU6-490P-201ENST00000362985 107 ntBASIC0.03□□□□□ -2.4
CLN6Q9NWW5 Y_RNA.166-201ENST00000363730 102 ntBASIC0.03□□□□□ -2.4
CLN6Q9NWW5 Y_RNA.318-201ENST00000365131 97 ntBASIC0.03□□□□□ -2.4
CLN6Q9NWW5 RNA5SP117-201ENST00000365294 118 ntBASIC0.03□□□□□ -2.4
CLN6Q9NWW5 SNORA8.2-201ENST00000384372 139 ntBASIC0.03□□□□□ -2.4
CLN6Q9NWW5 Y_RNA.547-201ENST00000384654 119 ntBASIC0.03□□□□□ -2.4
CLN6Q9NWW5 MIR518F-201ENST00000384973 87 ntBASIC0.03□□□□□ -2.4
CLN6Q9NWW5 MIR125B2-201ENST00000385128 89 ntBASIC0.03□□□□□ -2.4
CLN6Q9NWW5 MIR548O-201ENST00000408583 114 ntBASIC0.03□□□□□ -2.4
CLN6Q9NWW5 AC069113.3-201ENST00000521019 150 ntBASIC0.03□□□□□ -2.4
CLN6Q9NWW5 RAC1P9-201ENST00000604990 392 ntBASIC0.03□□□□□ -2.4
CLN6Q9NWW5 AC073869.6-201ENST00000640656 341 ntBASIC0.03□□□□□ -2.4
CLN6Q9NWW5 SNORD115-34-201ENST00000362441 82 ntBASIC0.02□□□□□ -2.41
CLN6Q9NWW5 SNORD115-12-201ENST00000362583 82 ntBASIC0.02□□□□□ -2.41
CLN6Q9NWW5 SNORD115-29-201ENST00000362834 82 ntBASIC0.02□□□□□ -2.41
CLN6Q9NWW5 SNORD115-9-201ENST00000362912 82 ntBASIC0.02□□□□□ -2.41
CLN6Q9NWW5 SNORD115-21-201ENST00000362963 81 ntBASIC0.02□□□□□ -2.41
CLN6Q9NWW5 SNORD115-14-201ENST00000363090 81 ntBASIC0.02□□□□□ -2.41
CLN6Q9NWW5 SNORD115-13-201ENST00000363358 82 ntBASIC0.02□□□□□ -2.41
CLN6Q9NWW5 SNORD115-41-201ENST00000363608 82 ntBASIC0.02□□□□□ -2.41
CLN6Q9NWW5 SNORD115-11-201ENST00000363616 82 ntBASIC0.02□□□□□ -2.41
CLN6Q9NWW5 SNORD115-5-201ENST00000363633 82 ntBASIC0.02□□□□□ -2.41
CLN6Q9NWW5 SNORD115-39-201ENST00000363694 82 ntBASIC0.02□□□□□ -2.41
CLN6Q9NWW5 SNORD115-4-201ENST00000363810 82 ntBASIC0.02□□□□□ -2.41
CLN6Q9NWW5 SNORD115-16-201ENST00000363887 82 ntBASIC0.02□□□□□ -2.41
CLN6Q9NWW5 SNORD115-6-201ENST00000363942 82 ntBASIC0.02□□□□□ -2.41
CLN6Q9NWW5 RNU6-1048P-201ENST00000364054 107 ntBASIC0.02□□□□□ -2.41
CLN6Q9NWW5 SNORD115-42-201ENST00000364273 82 ntBASIC0.02□□□□□ -2.41
CLN6Q9NWW5 RNU4-50P-201ENST00000364361 141 ntBASIC0.02□□□□□ -2.41
CLN6Q9NWW5 SNORD115-15-201ENST00000364809 81 ntBASIC0.02□□□□□ -2.41
CLN6Q9NWW5 SNORD115-1-201ENST00000364961 82 ntBASIC0.02□□□□□ -2.41
CLN6Q9NWW5 SNORD115-26-201ENST00000365067 82 ntBASIC0.02□□□□□ -2.41
CLN6Q9NWW5 SNORD115-10-201ENST00000365073 81 ntBASIC0.02□□□□□ -2.41
CLN6Q9NWW5 SNORD115-43-201ENST00000365503 82 ntBASIC0.02□□□□□ -2.41
CLN6Q9NWW5 SNORD115-36-201ENST00000365629 82 ntBASIC0.02□□□□□ -2.41
CLN6Q9NWW5 RNU6-815P-201ENST00000384080 113 ntBASIC0.02□□□□□ -2.41
CLN6Q9NWW5 SNORD116-4-201ENST00000384733 96 ntBASIC0.02□□□□□ -2.41
CLN6Q9NWW5 Y_RNA.567-201ENST00000384736 106 ntBASIC0.02□□□□□ -2.41
CLN6Q9NWW5 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.02□□□□□ -2.41
CLN6Q9NWW5 AC023449.1-201ENST00000454464 154 ntBASIC0.02□□□□□ -2.41
CLN6Q9NWW5 RNU7-185P-201ENST00000459215 60 ntBASIC0.02□□□□□ -2.41
CLN6Q9NWW5 RNU6-958P-201ENST00000516995 106 ntBASIC0.02□□□□□ -2.41
CLN6Q9NWW5 RNU7-156P-201ENST00000517214 74 ntBASIC0.02□□□□□ -2.41
CLN6Q9NWW5 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.02□□□□□ -2.41
CLN6Q9NWW5 SNORD115-40-201ENST00000606510 82 ntBASIC0.02□□□□□ -2.41
CLN6Q9NWW5 AC010205.1-201ENST00000616668 449 ntBASIC0.02□□□□□ -2.41
CLN6Q9NWW5 AC022306.2-201ENST00000617563 647 ntBASIC0.02□□□□□ -2.41
CLN6Q9NWW5 RNU6-42P-201ENST00000384165 107 ntBASIC0.01□□□□□ -2.41
CLN6Q9NWW5 RNU6-21P-201ENST00000384710 107 ntBASIC0.01□□□□□ -2.41
CLN6Q9NWW5 MIR588-201ENST00000384900 83 ntBASIC0.01□□□□□ -2.41
CLN6Q9NWW5 RNU6-1165P-201ENST00000410119 107 ntBASIC0.01□□□□□ -2.41
CLN6Q9NWW5 RNU2-70P-201ENST00000410718 179 ntBASIC0.01□□□□□ -2.41
CLN6Q9NWW5 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.01□□□□□ -2.41
CLN6Q9NWW5 MTND1P34-201ENST00000438556 671 ntBASIC0.01□□□□□ -2.41
CLN6Q9NWW5 MIR3678-201ENST00000578455 94 ntBASIC0.01□□□□□ -2.41
CLN6Q9NWW5 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC0.01□□□□□ -2.41
CLN6Q9NWW5 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.01□□□□□ -2.41
CLN6Q9NWW5 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.01□□□□□ -2.41
CLN6Q9NWW5 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.01□□□□□ -2.41
CLN6Q9NWW5 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0□□□□□ -2.41
CLN6Q9NWW5 Y_RNA.160-201ENST00000363677 92 ntBASIC0□□□□□ -2.41
CLN6Q9NWW5 SNORA72.4-201ENST00000384174 132 ntBASIC0□□□□□ -2.41
CLN6Q9NWW5 Y_RNA.494-201ENST00000384432 111 ntBASIC0□□□□□ -2.41
CLN6Q9NWW5 MIR559-201ENST00000385188 96 ntBASIC0□□□□□ -2.41
CLN6Q9NWW5 RNU2-14P-201ENST00000411053 191 ntBASIC0□□□□□ -2.41
CLN6Q9NWW5 PDCL2P1-201ENST00000419302 352 ntBASIC0□□□□□ -2.41
CLN6Q9NWW5 RNU6-559P-201ENST00000516151 98 ntBASIC0□□□□□ -2.41
CLN6Q9NWW5 AC112693.2-201ENST00000556538 232 ntBASIC0□□□□□ -2.41
CLN6Q9NWW5 SNORD92-201ENST00000585078 85 ntBASIC0□□□□□ -2.41
CLN6Q9NWW5 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.01□□□□□ -2.41
CLN6Q9NWW5 SNORD114-23-201ENST00000363536 72 ntBASIC-0.01□□□□□ -2.41
CLN6Q9NWW5 Y_RNA.279-201ENST00000364763 95 ntBASIC-0.01□□□□□ -2.41
CLN6Q9NWW5 RNU4-30P-201ENST00000410245 143 ntBASIC-0.01□□□□□ -2.41
CLN6Q9NWW5 MTCO1P5-201ENST00000433573 344 ntBASIC-0.01□□□□□ -2.41
CLN6Q9NWW5 RNU7-73P-201ENST00000458743 63 ntBASIC-0.01□□□□□ -2.41
CLN6Q9NWW5 RNU6-448P-201ENST00000517052 107 ntBASIC-0.01□□□□□ -2.41
CLN6Q9NWW5 RNU6-699P-201ENST00000517081 110 ntBASIC-0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 213.4 ms