Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 RNU6-126P-201ENST00000516685 103 ntBASIC0.97□□□□□ -2.25
BLOC1S4Q9NUP1 Y_RNA.711-201ENST00000516993 102 ntBASIC0.97□□□□□ -2.25
BLOC1S4Q9NUP1 AC023827.1-201ENST00000569247 97 ntBASIC0.97□□□□□ -2.25
BLOC1S4Q9NUP1 MIR4698-201ENST00000577795 80 ntBASIC0.97□□□□□ -2.25
BLOC1S4Q9NUP1 AC136443.5-201ENST00000603741 370 ntBASIC0.97□□□□□ -2.25
BLOC1S4Q9NUP1 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
BLOC1S4Q9NUP1 RNU1-93P-201ENST00000364704 169 ntBASIC0.96□□□□□ -2.26
BLOC1S4Q9NUP1 SNORA22B-201ENST00000383876 138 ntBASIC0.96□□□□□ -2.26
BLOC1S4Q9NUP1 SNORD28B-201ENST00000390993 75 ntBASIC0.96□□□□□ -2.26
BLOC1S4Q9NUP1 AL603910.2-201ENST00000407268 136 ntBASIC0.96□□□□□ -2.26
BLOC1S4Q9NUP1 RNU6-847P-201ENST00000411115 108 ntBASIC0.96□□□□□ -2.26
BLOC1S4Q9NUP1 MTCO2P12-201ENST00000427426 682 ntBASIC0.96□□□□□ -2.26
BLOC1S4Q9NUP1 ACA64.5-201ENST00000516207 127 ntBASIC0.96□□□□□ -2.26
BLOC1S4Q9NUP1 RNU6-197P-201ENST00000516680 100 ntBASIC0.96□□□□□ -2.26
BLOC1S4Q9NUP1 MIR4724-201ENST00000579485 89 ntBASIC0.96□□□□□ -2.26
BLOC1S4Q9NUP1 MIR4662B-201ENST00000579498 81 ntBASIC0.96□□□□□ -2.26
BLOC1S4Q9NUP1 MIR5688-201ENST00000580619 83 ntBASIC0.96□□□□□ -2.26
BLOC1S4Q9NUP1 RNU6-1272P-201ENST00000362776 107 ntBASIC0.95□□□□□ -2.26
BLOC1S4Q9NUP1 SNORD113.3-201ENST00000364630 78 ntBASIC0.95□□□□□ -2.26
BLOC1S4Q9NUP1 RNU6-396P-201ENST00000365369 105 ntBASIC0.95□□□□□ -2.26
BLOC1S4Q9NUP1 RNU6-994P-201ENST00000410507 111 ntBASIC0.95□□□□□ -2.26
BLOC1S4Q9NUP1 RNY3P15-201ENST00000516297 97 ntBASIC0.95□□□□□ -2.26
BLOC1S4Q9NUP1 RNU6-1110P-201ENST00000516462 101 ntBASIC0.95□□□□□ -2.26
BLOC1S4Q9NUP1 AC131281.1-201ENST00000522984 164 ntBASIC0.95□□□□□ -2.26
BLOC1S4Q9NUP1 MIR5692C2-201ENST00000577959 77 ntBASIC0.95□□□□□ -2.26
BLOC1S4Q9NUP1 uc_338.4-201ENST00000616635 176 ntBASIC0.95□□□□□ -2.26
BLOC1S4Q9NUP1 AC022140.2-201ENST00000623500 188 ntBASIC0.95□□□□□ -2.26
BLOC1S4Q9NUP1 MTND4P29-201ENST00000503122 1372 ntBASIC0.95□□□□□ -2.26
BLOC1S4Q9NUP1 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.95□□□□□ -2.26
BLOC1S4Q9NUP1 RNU6-613P-201ENST00000410412 108 ntBASIC0.94□□□□□ -2.26
BLOC1S4Q9NUP1 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.94□□□□□ -2.26
BLOC1S4Q9NUP1 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.94□□□□□ -2.26
BLOC1S4Q9NUP1 RNU6-113P-201ENST00000516653 101 ntBASIC0.94□□□□□ -2.26
BLOC1S4Q9NUP1 MIR4653-201ENST00000585107 83 ntBASIC0.94□□□□□ -2.26
BLOC1S4Q9NUP1 MIR6857-201ENST00000613267 93 ntBASIC0.94□□□□□ -2.26
BLOC1S4Q9NUP1 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.94□□□□□ -2.26
BLOC1S4Q9NUP1 Y_RNA.19-201ENST00000362462 99 ntBASIC0.93□□□□□ -2.26
BLOC1S4Q9NUP1 Y_RNA.202-201ENST00000364083 110 ntBASIC0.93□□□□□ -2.26
BLOC1S4Q9NUP1 RNU6-1138P-201ENST00000365359 106 ntBASIC0.93□□□□□ -2.26
BLOC1S4Q9NUP1 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.93□□□□□ -2.26
BLOC1S4Q9NUP1 MIR1276-201ENST00000408707 83 ntBASIC0.93□□□□□ -2.26
BLOC1S4Q9NUP1 Y_RNA.637-201ENST00000459424 114 ntBASIC0.93□□□□□ -2.26
BLOC1S4Q9NUP1 AC098869.1-201ENST00000481627 292 ntBASIC0.93□□□□□ -2.26
BLOC1S4Q9NUP1 PSMC1P5-201ENST00000512850 177 ntBASIC0.93□□□□□ -2.26
BLOC1S4Q9NUP1 AC036111.3-201ENST00000526389 112 ntBASIC0.93□□□□□ -2.26
BLOC1S4Q9NUP1 AL021707.8-201ENST00000609428 183 ntBASIC0.93□□□□□ -2.26
BLOC1S4Q9NUP1 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.92□□□□□ -2.26
BLOC1S4Q9NUP1 RNU6-121P-201ENST00000410525 99 ntBASIC0.92□□□□□ -2.26
BLOC1S4Q9NUP1 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.92□□□□□ -2.26
BLOC1S4Q9NUP1 AC091959.1-201ENST00000495857 238 ntBASIC0.92□□□□□ -2.26
BLOC1S4Q9NUP1 RNU4-57P-201ENST00000515980 135 ntBASIC0.92□□□□□ -2.26
BLOC1S4Q9NUP1 RNU6-351P-201ENST00000516097 100 ntBASIC0.92□□□□□ -2.26
BLOC1S4Q9NUP1 RNU7-149P-201ENST00000516739 59 ntBASIC0.92□□□□□ -2.26
BLOC1S4Q9NUP1 RNU7-181P-201ENST00000517234 74 ntBASIC0.92□□□□□ -2.26
BLOC1S4Q9NUP1 AC113195.1-201ENST00000579952 141 ntBASIC0.92□□□□□ -2.26
BLOC1S4Q9NUP1 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC0.92□□□□□ -2.26
BLOC1S4Q9NUP1 MIR4791-201ENST00000607666 84 ntBASIC0.92□□□□□ -2.26
BLOC1S4Q9NUP1 MIR8070-201ENST00000616510 88 ntBASIC0.92□□□□□ -2.26
BLOC1S4Q9NUP1 MIR6516-201ENST00000630554 81 ntBASIC0.92□□□□□ -2.26
BLOC1S4Q9NUP1 Y_RNA.210-201ENST00000364161 110 ntBASIC0.91□□□□□ -2.26
BLOC1S4Q9NUP1 Y_RNA.214-201ENST00000364201 112 ntBASIC0.91□□□□□ -2.26
BLOC1S4Q9NUP1 Y_RNA.293-201ENST00000364908 93 ntBASIC0.91□□□□□ -2.26
BLOC1S4Q9NUP1 Y_RNA.376-201ENST00000365638 108 ntBASIC0.91□□□□□ -2.26
BLOC1S4Q9NUP1 MT-TN-201ENST00000387400 73 ntBASIC0.91□□□□□ -2.26
BLOC1S4Q9NUP1 ELOCP20-201ENST00000422460 345 ntBASIC0.91□□□□□ -2.26
BLOC1S4Q9NUP1 AC113410.1-201ENST00000505029 247 ntBASIC0.91□□□□□ -2.26
BLOC1S4Q9NUP1 Y_RNA.676-201ENST00000516393 96 ntBASIC0.91□□□□□ -2.26
BLOC1S4Q9NUP1 SNORA27.4-201ENST00000516650 95 ntBASIC0.91□□□□□ -2.26
BLOC1S4Q9NUP1 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.91□□□□□ -2.26
BLOC1S4Q9NUP1 MIR3171-201ENST00000584270 74 ntBASIC0.91□□□□□ -2.26
BLOC1S4Q9NUP1 AL353765.1-201ENST00000605514 183 ntBASIC0.91□□□□□ -2.26
BLOC1S4Q9NUP1 RNU6-797P-201ENST00000363101 109 ntBASIC0.9□□□□□ -2.27
BLOC1S4Q9NUP1 Y_RNA.105-201ENST00000363182 111 ntBASIC0.9□□□□□ -2.27
BLOC1S4Q9NUP1 SNORD114-2-201ENST00000363953 78 ntBASIC0.9□□□□□ -2.27
BLOC1S4Q9NUP1 RNU6-110P-201ENST00000384508 104 ntBASIC0.9□□□□□ -2.27
BLOC1S4Q9NUP1 Y_RNA.541-201ENST00000384640 113 ntBASIC0.9□□□□□ -2.27
BLOC1S4Q9NUP1 MIR526A2-201ENST00000390198 65 ntBASIC0.9□□□□□ -2.27
BLOC1S4Q9NUP1 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.9□□□□□ -2.27
BLOC1S4Q9NUP1 MIR1302-7-201ENST00000408841 72 ntBASIC0.9□□□□□ -2.27
BLOC1S4Q9NUP1 BTF3P11-201ENST00000426582 477 ntBASIC0.9□□□□□ -2.27
BLOC1S4Q9NUP1 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.9□□□□□ -2.27
BLOC1S4Q9NUP1 AC243994.1-201ENST00000618627 109 ntBASIC0.9□□□□□ -2.27
BLOC1S4Q9NUP1 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.89□□□□□ -2.27
BLOC1S4Q9NUP1 snoU2_19.2-201ENST00000363024 80 ntBASIC0.89□□□□□ -2.27
BLOC1S4Q9NUP1 Y_RNA.168-201ENST00000363740 102 ntBASIC0.89□□□□□ -2.27
BLOC1S4Q9NUP1 Y_RNA.527-201ENST00000384573 102 ntBASIC0.89□□□□□ -2.27
BLOC1S4Q9NUP1 SNORA2B-201ENST00000384583 137 ntBASIC0.89□□□□□ -2.27
BLOC1S4Q9NUP1 SNORD89-201ENST00000390981 114 ntBASIC0.89□□□□□ -2.27
BLOC1S4Q9NUP1 MIR548O-201ENST00000408583 114 ntBASIC0.89□□□□□ -2.27
BLOC1S4Q9NUP1 RNU6-383P-201ENST00000410864 94 ntBASIC0.89□□□□□ -2.27
BLOC1S4Q9NUP1 AC113618.1-201ENST00000416747 285 ntBASIC0.89□□□□□ -2.27
BLOC1S4Q9NUP1 AC087499.4-201ENST00000448505 178 ntBASIC0.89□□□□□ -2.27
BLOC1S4Q9NUP1 RNU2-13P-201ENST00000515909 113 ntBASIC0.89□□□□□ -2.27
BLOC1S4Q9NUP1 AP003733.2-201ENST00000529409 171 ntBASIC0.89□□□□□ -2.27
BLOC1S4Q9NUP1 AC104465.1-201ENST00000611365 139 ntBASIC0.89□□□□□ -2.27
BLOC1S4Q9NUP1 Y_RNA.802-201ENST00000614892 130 ntBASIC0.89□□□□□ -2.27
BLOC1S4Q9NUP1 MIR377-201ENST00000362145 69 ntBASIC0.88□□□□□ -2.27
BLOC1S4Q9NUP1 Y_RNA.138-201ENST00000363462 102 ntBASIC0.88□□□□□ -2.27
BLOC1S4Q9NUP1 SNORA25.9-201ENST00000365087 128 ntBASIC0.88□□□□□ -2.27
BLOC1S4Q9NUP1 Y_RNA.394-201ENST00000383942 103 ntBASIC0.88□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 206 ms