Protein–RNA interactions for Protein: Q9NPG4

PCDH12, Protocadherin-12, humanhuman

Predictions only

Length 1,184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH12Q9NPG4 AC015726.2-201ENST00000620112 122 ntBASIC1.8□□□□□ -2.12
PCDH12Q9NPG4 Y_RNA.188-201ENST00000363952 111 ntBASIC1.79□□□□□ -2.12
PCDH12Q9NPG4 SNORA1.2-201ENST00000365189 134 ntBASIC1.79□□□□□ -2.12
PCDH12Q9NPG4 MIR520C-201ENST00000385005 87 ntBASIC1.79□□□□□ -2.12
PCDH12Q9NPG4 RNU6-482P-201ENST00000391068 107 ntBASIC1.79□□□□□ -2.12
PCDH12Q9NPG4 RNU6-381P-201ENST00000391259 108 ntBASIC1.79□□□□□ -2.12
PCDH12Q9NPG4 AL606845.1-201ENST00000404881 255 ntBASIC1.79□□□□□ -2.12
PCDH12Q9NPG4 SNORD123-201ENST00000459473 70 ntBASIC1.79□□□□□ -2.12
PCDH12Q9NPG4 MIR8081-201ENST00000611533 95 ntBASIC1.79□□□□□ -2.12
PCDH12Q9NPG4 Y_RNA.199-201ENST00000364014 102 ntBASIC1.78□□□□□ -2.12
PCDH12Q9NPG4 Y_RNA.432-201ENST00000384087 111 ntBASIC1.78□□□□□ -2.12
PCDH12Q9NPG4 SNORA79-201ENST00000408376 140 ntBASIC1.78□□□□□ -2.12
PCDH12Q9NPG4 SNRPGP13-201ENST00000442212 177 ntBASIC1.78□□□□□ -2.12
PCDH12Q9NPG4 RPS29P23-201ENST00000458635 123 ntBASIC1.78□□□□□ -2.12
PCDH12Q9NPG4 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.78□□□□□ -2.12
PCDH12Q9NPG4 AC011921.3-201ENST00000605540 361 ntBASIC1.78□□□□□ -2.12
PCDH12Q9NPG4 AL442644.1-201ENST00000454390 3105 ntBASIC1.78□□□□□ -2.12
PCDH12Q9NPG4 AL161722.3-201ENST00000605789 2983 ntBASIC1.77□□□□□ -2.13
PCDH12Q9NPG4 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
PCDH12Q9NPG4 Y_RNA.308-201ENST00000365043 101 ntBASIC1.77□□□□□ -2.13
PCDH12Q9NPG4 RNU2-70P-201ENST00000410718 179 ntBASIC1.77□□□□□ -2.13
PCDH12Q9NPG4 Y_RNA.626-201ENST00000411288 95 ntBASIC1.77□□□□□ -2.13
PCDH12Q9NPG4 Y_RNA.680-201ENST00000516441 93 ntBASIC1.77□□□□□ -2.13
PCDH12Q9NPG4 RNU6-504P-201ENST00000516568 104 ntBASIC1.77□□□□□ -2.13
PCDH12Q9NPG4 RNU6-111P-201ENST00000517179 105 ntBASIC1.77□□□□□ -2.13
PCDH12Q9NPG4 MIR4419B-201ENST00000577260 68 ntBASIC1.77□□□□□ -2.13
PCDH12Q9NPG4 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.76□□□□□ -2.13
PCDH12Q9NPG4 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
PCDH12Q9NPG4 RNY1-201ENST00000364228 113 ntBASIC1.76□□□□□ -2.13
PCDH12Q9NPG4 snoU2_19.4-201ENST00000364329 80 ntBASIC1.76□□□□□ -2.13
PCDH12Q9NPG4 RNU6-728P-201ENST00000365375 104 ntBASIC1.76□□□□□ -2.13
PCDH12Q9NPG4 MT-TG-201ENST00000387429 68 ntBASIC1.76□□□□□ -2.13
PCDH12Q9NPG4 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.76□□□□□ -2.13
PCDH12Q9NPG4 MIR548O-201ENST00000408583 114 ntBASIC1.76□□□□□ -2.13
PCDH12Q9NPG4 RNU1-98P-201ENST00000458992 160 ntBASIC1.76□□□□□ -2.13
PCDH12Q9NPG4 SNORA31.4-201ENST00000516049 129 ntBASIC1.76□□□□□ -2.13
PCDH12Q9NPG4 RNA5SP153-201ENST00000516498 76 ntBASIC1.76□□□□□ -2.13
PCDH12Q9NPG4 RNU6-1271P-201ENST00000517049 105 ntBASIC1.76□□□□□ -2.13
PCDH12Q9NPG4 RNU6-165P-201ENST00000517170 99 ntBASIC1.76□□□□□ -2.13
PCDH12Q9NPG4 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.76□□□□□ -2.13
PCDH12Q9NPG4 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.76□□□□□ -2.13
PCDH12Q9NPG4 SNORD24-201ENST00000383884 75 ntBASIC1.75□□□□□ -2.13
PCDH12Q9NPG4 Y_RNA.486-201ENST00000384398 107 ntBASIC1.75□□□□□ -2.13
PCDH12Q9NPG4 U8.17-201ENST00000391292 132 ntBASIC1.75□□□□□ -2.13
PCDH12Q9NPG4 AL627390.1-201ENST00000396055 340 ntBASIC1.75□□□□□ -2.13
PCDH12Q9NPG4 SCARNA8-201ENST00000515924 131 ntBASIC1.75□□□□□ -2.13
PCDH12Q9NPG4 SNORA25.15-201ENST00000516487 89 ntBASIC1.75□□□□□ -2.13
PCDH12Q9NPG4 MIR4764-201ENST00000580680 88 ntBASIC1.75□□□□□ -2.13
PCDH12Q9NPG4 Y_RNA.7-201ENST00000362352 102 ntBASIC1.74□□□□□ -2.13
PCDH12Q9NPG4 Y_RNA.121-201ENST00000363309 113 ntBASIC1.74□□□□□ -2.13
PCDH12Q9NPG4 RNA5SP99-201ENST00000364020 114 ntBASIC1.74□□□□□ -2.13
PCDH12Q9NPG4 RNA5SP363-201ENST00000365072 115 ntBASIC1.74□□□□□ -2.13
PCDH12Q9NPG4 SNORD26-201ENST00000384147 75 ntBASIC1.74□□□□□ -2.13
PCDH12Q9NPG4 MT-TT-201ENST00000387460 66 ntBASIC1.74□□□□□ -2.13
PCDH12Q9NPG4 RNU6-1054P-201ENST00000411293 104 ntBASIC1.74□□□□□ -2.13
PCDH12Q9NPG4 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.74□□□□□ -2.13
PCDH12Q9NPG4 AC107297.1-201ENST00000459991 176 ntBASIC1.74□□□□□ -2.13
PCDH12Q9NPG4 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.74□□□□□ -2.13
PCDH12Q9NPG4 MIR4744-201ENST00000581563 82 ntBASIC1.74□□□□□ -2.13
PCDH12Q9NPG4 RNA5SP48-201ENST00000363969 126 ntBASIC1.73□□□□□ -2.13
PCDH12Q9NPG4 Y_RNA.200-201ENST00000364018 102 ntBASIC1.73□□□□□ -2.13
PCDH12Q9NPG4 Y_RNA.476-201ENST00000384347 108 ntBASIC1.73□□□□□ -2.13
PCDH12Q9NPG4 Y_RNA.622-201ENST00000411091 108 ntBASIC1.73□□□□□ -2.13
PCDH12Q9NPG4 AL133373.1-201ENST00000497098 94 ntBASIC1.73□□□□□ -2.13
PCDH12Q9NPG4 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.73□□□□□ -2.13
PCDH12Q9NPG4 Y_RNA.666-201ENST00000516187 112 ntBASIC1.73□□□□□ -2.13
PCDH12Q9NPG4 RNU7-25P-201ENST00000516544 62 ntBASIC1.73□□□□□ -2.13
PCDH12Q9NPG4 RNU6-453P-201ENST00000516819 85 ntBASIC1.73□□□□□ -2.13
PCDH12Q9NPG4 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.73□□□□□ -2.13
PCDH12Q9NPG4 AL160236.1-201ENST00000556317 195 ntBASIC1.73□□□□□ -2.13
PCDH12Q9NPG4 AL353997.5-201ENST00000618886 171 ntBASIC1.73□□□□□ -2.13
PCDH12Q9NPG4 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.73□□□□□ -2.13
PCDH12Q9NPG4 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.73□□□□□ -2.13
PCDH12Q9NPG4 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.73□□□□□ -2.13
PCDH12Q9NPG4 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
PCDH12Q9NPG4 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
PCDH12Q9NPG4 RNU1-17P-201ENST00000363022 152 ntBASIC1.72□□□□□ -2.13
PCDH12Q9NPG4 Y_RNA.515-201ENST00000384535 112 ntBASIC1.72□□□□□ -2.13
PCDH12Q9NPG4 Y_RNA.547-201ENST00000384654 119 ntBASIC1.72□□□□□ -2.13
PCDH12Q9NPG4 RNU6-493P-201ENST00000391321 108 ntBASIC1.72□□□□□ -2.13
PCDH12Q9NPG4 AC087499.4-201ENST00000448505 178 ntBASIC1.72□□□□□ -2.13
PCDH12Q9NPG4 RNU6-693P-201ENST00000516134 107 ntBASIC1.72□□□□□ -2.13
PCDH12Q9NPG4 MIR3618-201ENST00000580330 88 ntBASIC1.72□□□□□ -2.13
PCDH12Q9NPG4 MIR3683-201ENST00000580847 82 ntBASIC1.72□□□□□ -2.13
PCDH12Q9NPG4 AP000648.3-201ENST00000623539 4507 ntBASIC1.72□□□□□ -2.13
PCDH12Q9NPG4 Y_RNA.83-201ENST00000363005 113 ntBASIC1.71□□□□□ -2.14
PCDH12Q9NPG4 RNA5SP190-201ENST00000365222 118 ntBASIC1.71□□□□□ -2.14
PCDH12Q9NPG4 Y_RNA.370-201ENST00000365589 108 ntBASIC1.71□□□□□ -2.14
PCDH12Q9NPG4 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.71□□□□□ -2.14
PCDH12Q9NPG4 AC245047.7-201ENST00000440265 293 ntBASIC1.71□□□□□ -2.14
PCDH12Q9NPG4 SNRPGP8-201ENST00000454064 226 ntBASIC1.71□□□□□ -2.14
PCDH12Q9NPG4 SNORA31.2-201ENST00000516019 134 ntBASIC1.71□□□□□ -2.14
PCDH12Q9NPG4 Z83818.1-201ENST00000603584 150 ntBASIC1.71□□□□□ -2.14
PCDH12Q9NPG4 AL096861.1-201ENST00000610899 123 ntBASIC1.71□□□□□ -2.14
PCDH12Q9NPG4 SNORD45.3-201ENST00000363836 72 ntBASIC1.7□□□□□ -2.14
PCDH12Q9NPG4 SNORD115-28-201ENST00000363931 81 ntBASIC1.7□□□□□ -2.14
PCDH12Q9NPG4 Y_RNA.634-201ENST00000364811 113 ntBASIC1.7□□□□□ -2.14
PCDH12Q9NPG4 RNU6-484P-201ENST00000384016 107 ntBASIC1.7□□□□□ -2.14
PCDH12Q9NPG4 Y_RNA.552-201ENST00000384665 112 ntBASIC1.7□□□□□ -2.14
PCDH12Q9NPG4 RNU6-997P-201ENST00000384725 107 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 186.9 ms