Protein–RNA interactions for Protein: Q9HCL0

PCDH18, Protocadherin-18, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH18Q9HCL0 HMGN2P38-201ENST00000423806 265 ntBASIC2.39□□□□□ -2.03
PCDH18Q9HCL0 AL445646.1-201ENST00000431784 216 ntBASIC2.39□□□□□ -2.03
PCDH18Q9HCL0 SNRPGP14-201ENST00000435400 219 ntBASIC2.39□□□□□ -2.03
PCDH18Q9HCL0 HSPE1P9-201ENST00000440046 311 ntBASIC2.39□□□□□ -2.03
PCDH18Q9HCL0 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.39□□□□□ -2.03
PCDH18Q9HCL0 AC090255.1-201ENST00000495779 349 ntBASIC2.39□□□□□ -2.03
PCDH18Q9HCL0 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.39□□□□□ -2.03
PCDH18Q9HCL0 AC084364.2-201ENST00000546924 395 ntBASIC2.39□□□□□ -2.03
PCDH18Q9HCL0 AC087685.1-201ENST00000587507 141 ntBASIC2.39□□□□□ -2.03
PCDH18Q9HCL0 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
PCDH18Q9HCL0 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.39□□□□□ -2.03
PCDH18Q9HCL0 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.38□□□□□ -2.03
PCDH18Q9HCL0 AL596211.1-201ENST00000569873 2277 ntBASIC2.38□□□□□ -2.03
PCDH18Q9HCL0 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
PCDH18Q9HCL0 RNA5SP289-201ENST00000362332 137 ntBASIC2.38□□□□□ -2.03
PCDH18Q9HCL0 Y_RNA.43-201ENST00000362670 111 ntBASIC2.38□□□□□ -2.03
PCDH18Q9HCL0 RNU4-16P-201ENST00000364737 141 ntBASIC2.38□□□□□ -2.03
PCDH18Q9HCL0 RNU6-163P-201ENST00000384396 106 ntBASIC2.38□□□□□ -2.03
PCDH18Q9HCL0 Y_RNA.495-201ENST00000384435 112 ntBASIC2.38□□□□□ -2.03
PCDH18Q9HCL0 SNORD12C-201ENST00000386307 89 ntBASIC2.38□□□□□ -2.03
PCDH18Q9HCL0 RNU11-3P-201ENST00000391111 133 ntBASIC2.38□□□□□ -2.03
PCDH18Q9HCL0 RNU6-938P-201ENST00000411285 103 ntBASIC2.38□□□□□ -2.03
PCDH18Q9HCL0 AL031737.1-201ENST00000450125 223 ntBASIC2.38□□□□□ -2.03
PCDH18Q9HCL0 RNA5SP24-201ENST00000516478 95 ntBASIC2.38□□□□□ -2.03
PCDH18Q9HCL0 SNORA31.10-201ENST00000516482 106 ntBASIC2.38□□□□□ -2.03
PCDH18Q9HCL0 RNY4P20-201ENST00000516678 93 ntBASIC2.38□□□□□ -2.03
PCDH18Q9HCL0 SNORA18.7-201ENST00000516910 131 ntBASIC2.38□□□□□ -2.03
PCDH18Q9HCL0 RNU7-70P-201ENST00000516941 66 ntBASIC2.38□□□□□ -2.03
PCDH18Q9HCL0 MIR3126-201ENST00000577443 74 ntBASIC2.38□□□□□ -2.03
PCDH18Q9HCL0 MIR4672-201ENST00000583126 81 ntBASIC2.38□□□□□ -2.03
PCDH18Q9HCL0 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.38□□□□□ -2.03
PCDH18Q9HCL0 AC006441.5-201ENST00000612680 209 ntBASIC2.38□□□□□ -2.03
PCDH18Q9HCL0 MIR8054-201ENST00000620877 86 ntBASIC2.38□□□□□ -2.03
PCDH18Q9HCL0 AL035470.1-201ENST00000622571 220 ntBASIC2.38□□□□□ -2.03
PCDH18Q9HCL0 MIR6766-201ENST00000622641 72 ntBASIC2.38□□□□□ -2.03
PCDH18Q9HCL0 AP000648.3-201ENST00000623539 4507 ntBASIC2.38□□□□□ -2.03
PCDH18Q9HCL0 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
PCDH18Q9HCL0 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
PCDH18Q9HCL0 ZNF720P1-201ENST00000562403 1939 ntBASIC2.37□□□□□ -2.03
PCDH18Q9HCL0 SNORA38-201ENST00000363946 132 ntBASIC2.37□□□□□ -2.03
PCDH18Q9HCL0 RNU6-1107P-201ENST00000364817 104 ntBASIC2.37□□□□□ -2.03
PCDH18Q9HCL0 SNORA4.2-201ENST00000365313 147 ntBASIC2.37□□□□□ -2.03
PCDH18Q9HCL0 MIR515-2-201ENST00000384883 83 ntBASIC2.37□□□□□ -2.03
PCDH18Q9HCL0 MIR515-1-201ENST00000384884 83 ntBASIC2.37□□□□□ -2.03
PCDH18Q9HCL0 MT-TI-201ENST00000387365 69 ntBASIC2.37□□□□□ -2.03
PCDH18Q9HCL0 RNU6-554P-201ENST00000410466 106 ntBASIC2.37□□□□□ -2.03
PCDH18Q9HCL0 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.37□□□□□ -2.03
PCDH18Q9HCL0 AC026271.5-201ENST00000577873 130 ntBASIC2.37□□□□□ -2.03
PCDH18Q9HCL0 SNORD53-201ENST00000579969 78 ntBASIC2.37□□□□□ -2.03
PCDH18Q9HCL0 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
PCDH18Q9HCL0 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.36□□□□□ -2.03
PCDH18Q9HCL0 RNU6-106P-201ENST00000384405 107 ntBASIC2.36□□□□□ -2.03
PCDH18Q9HCL0 RNA5SP482-201ENST00000391269 118 ntBASIC2.36□□□□□ -2.03
PCDH18Q9HCL0 RNY4P30-201ENST00000410216 95 ntBASIC2.36□□□□□ -2.03
PCDH18Q9HCL0 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC2.36□□□□□ -2.03
PCDH18Q9HCL0 RNU6-537P-201ENST00000517277 103 ntBASIC2.36□□□□□ -2.03
PCDH18Q9HCL0 SUMO2P16-201ENST00000519475 264 ntBASIC2.36□□□□□ -2.03
PCDH18Q9HCL0 AP003484.1-201ENST00000530974 250 ntBASIC2.36□□□□□ -2.03
PCDH18Q9HCL0 AC022523.2-201ENST00000561045 150 ntBASIC2.36□□□□□ -2.03
PCDH18Q9HCL0 MIR4762-201ENST00000585261 75 ntBASIC2.36□□□□□ -2.03
PCDH18Q9HCL0 AC131280.1-202ENST00000624067 4211 ntBASIC2.36□□□□□ -2.03
PCDH18Q9HCL0 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.36□□□□□ -2.03
PCDH18Q9HCL0 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.36□□□□□ -2.03
PCDH18Q9HCL0 RNU1-58P-201ENST00000362413 163 ntBASIC2.35□□□□□ -2.03
PCDH18Q9HCL0 U8.5-201ENST00000364528 136 ntBASIC2.35□□□□□ -2.03
PCDH18Q9HCL0 Y_RNA.351-201ENST00000365436 96 ntBASIC2.35□□□□□ -2.03
PCDH18Q9HCL0 Y_RNA.440-201ENST00000384120 114 ntBASIC2.35□□□□□ -2.03
PCDH18Q9HCL0 RNU1-52P-201ENST00000384190 164 ntBASIC2.35□□□□□ -2.03
PCDH18Q9HCL0 RNU4-52P-201ENST00000384209 138 ntBASIC2.35□□□□□ -2.03
PCDH18Q9HCL0 Y_RNA.494-201ENST00000384432 111 ntBASIC2.35□□□□□ -2.03
PCDH18Q9HCL0 MIR570-201ENST00000384917 97 ntBASIC2.35□□□□□ -2.03
PCDH18Q9HCL0 U8.17-201ENST00000391292 132 ntBASIC2.35□□□□□ -2.03
PCDH18Q9HCL0 SNORA11.4-201ENST00000408823 129 ntBASIC2.35□□□□□ -2.03
PCDH18Q9HCL0 RNA5SP281-201ENST00000516504 135 ntBASIC2.35□□□□□ -2.03
PCDH18Q9HCL0 MIR4658-201ENST00000584344 65 ntBASIC2.35□□□□□ -2.03
PCDH18Q9HCL0 AC021443.1-201ENST00000604478 211 ntBASIC2.35□□□□□ -2.03
PCDH18Q9HCL0 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.35□□□□□ -2.03
PCDH18Q9HCL0 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.35□□□□□ -2.03
PCDH18Q9HCL0 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
PCDH18Q9HCL0 RNU6-349P-201ENST00000362402 107 ntBASIC2.34□□□□□ -2.03
PCDH18Q9HCL0 RNU6-414P-201ENST00000363705 104 ntBASIC2.34□□□□□ -2.03
PCDH18Q9HCL0 RNU1-133P-201ENST00000364867 167 ntBASIC2.34□□□□□ -2.03
PCDH18Q9HCL0 Y_RNA.410-201ENST00000383992 113 ntBASIC2.34□□□□□ -2.03
PCDH18Q9HCL0 RNU1-148P-201ENST00000384472 162 ntBASIC2.34□□□□□ -2.03
PCDH18Q9HCL0 SNORA11.2-201ENST00000408318 127 ntBASIC2.34□□□□□ -2.03
PCDH18Q9HCL0 RN7SKP284-201ENST00000411002 343 ntBASIC2.34□□□□□ -2.03
PCDH18Q9HCL0 HMGN2P32-201ENST00000444648 269 ntBASIC2.34□□□□□ -2.03
PCDH18Q9HCL0 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.34□□□□□ -2.03
PCDH18Q9HCL0 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.34□□□□□ -2.03
PCDH18Q9HCL0 RNU6-830P-201ENST00000516353 107 ntBASIC2.34□□□□□ -2.03
PCDH18Q9HCL0 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.34□□□□□ -2.03
PCDH18Q9HCL0 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.34□□□□□ -2.03
PCDH18Q9HCL0 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
PCDH18Q9HCL0 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
PCDH18Q9HCL0 SNORA51.10-201ENST00000384418 136 ntBASIC2.33□□□□□ -2.04
PCDH18Q9HCL0 RNU6-1104P-201ENST00000384723 104 ntBASIC2.33□□□□□ -2.04
PCDH18Q9HCL0 U8.16-201ENST00000391279 133 ntBASIC2.33□□□□□ -2.04
PCDH18Q9HCL0 RNA5SP136-201ENST00000410906 107 ntBASIC2.33□□□□□ -2.04
PCDH18Q9HCL0 HMGN2P3-201ENST00000433603 273 ntBASIC2.33□□□□□ -2.04
PCDH18Q9HCL0 HMGN2P5-201ENST00000436882 273 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 406.7 ms