Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 RNU6-1040P-201ENST00000383974 107 ntBASIC0.09□□□□□ -2.4
SND1-IT1Q9HBX3 SNORD63-201ENST00000384262 68 ntBASIC0.09□□□□□ -2.4
SND1-IT1Q9HBX3 Y_RNA.474-201ENST00000384341 102 ntBASIC0.09□□□□□ -2.4
SND1-IT1Q9HBX3 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC0.09□□□□□ -2.4
SND1-IT1Q9HBX3 Y_RNA.655-201ENST00000515919 96 ntBASIC0.09□□□□□ -2.4
SND1-IT1Q9HBX3 RNU7-25P-201ENST00000516544 62 ntBASIC0.09□□□□□ -2.4
SND1-IT1Q9HBX3 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.09□□□□□ -2.4
SND1-IT1Q9HBX3 Y_RNA.428-201ENST00000384078 102 ntBASIC0.08□□□□□ -2.4
SND1-IT1Q9HBX3 Y_RNA.547-201ENST00000384654 119 ntBASIC0.08□□□□□ -2.4
SND1-IT1Q9HBX3 RNU6-21P-201ENST00000384710 107 ntBASIC0.08□□□□□ -2.4
SND1-IT1Q9HBX3 MIR548O-201ENST00000408583 114 ntBASIC0.08□□□□□ -2.4
SND1-IT1Q9HBX3 AC015818.7-201ENST00000428754 109 ntBASIC0.08□□□□□ -2.4
SND1-IT1Q9HBX3 AC087499.7-201ENST00000441958 109 ntBASIC0.08□□□□□ -2.4
SND1-IT1Q9HBX3 AC087499.4-201ENST00000448505 178 ntBASIC0.08□□□□□ -2.4
SND1-IT1Q9HBX3 AC023449.1-201ENST00000454464 154 ntBASIC0.08□□□□□ -2.4
SND1-IT1Q9HBX3 RNU7-73P-201ENST00000458743 63 ntBASIC0.08□□□□□ -2.4
SND1-IT1Q9HBX3 MIR4711-201ENST00000578274 70 ntBASIC0.08□□□□□ -2.4
SND1-IT1Q9HBX3 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.08□□□□□ -2.4
SND1-IT1Q9HBX3 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.08□□□□□ -2.4
SND1-IT1Q9HBX3 AC092794.1-201ENST00000612734 582 ntBASIC0.08□□□□□ -2.4
SND1-IT1Q9HBX3 DLEU2_2.2-201ENST00000615474 90 ntBASIC0.08□□□□□ -2.4
SND1-IT1Q9HBX3 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.07□□□□□ -2.4
SND1-IT1Q9HBX3 RNU6-1099P-201ENST00000363533 107 ntBASIC0.07□□□□□ -2.4
SND1-IT1Q9HBX3 SNORD118-201ENST00000363593 134 ntBASIC0.07□□□□□ -2.4
SND1-IT1Q9HBX3 SNORD38B-201ENST00000384690 67 ntBASIC0.07□□□□□ -2.4
SND1-IT1Q9HBX3 MIR125B2-201ENST00000385128 89 ntBASIC0.07□□□□□ -2.4
SND1-IT1Q9HBX3 RNU6-1319P-201ENST00000390855 104 ntBASIC0.07□□□□□ -2.4
SND1-IT1Q9HBX3 RNU6-747P-201ENST00000390928 104 ntBASIC0.07□□□□□ -2.4
SND1-IT1Q9HBX3 RNU6-241P-201ENST00000391148 104 ntBASIC0.07□□□□□ -2.4
SND1-IT1Q9HBX3 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.07□□□□□ -2.4
SND1-IT1Q9HBX3 MIR1257-201ENST00000408490 117 ntBASIC0.07□□□□□ -2.4
SND1-IT1Q9HBX3 MIR1278-201ENST00000408753 81 ntBASIC0.07□□□□□ -2.4
SND1-IT1Q9HBX3 RNU6-447P-201ENST00000410293 104 ntBASIC0.07□□□□□ -2.4
SND1-IT1Q9HBX3 RNU6-1118P-201ENST00000410382 104 ntBASIC0.07□□□□□ -2.4
SND1-IT1Q9HBX3 RNU6-1076P-201ENST00000410397 104 ntBASIC0.07□□□□□ -2.4
SND1-IT1Q9HBX3 RNU6-355P-201ENST00000410427 104 ntBASIC0.07□□□□□ -2.4
SND1-IT1Q9HBX3 RNU6-791P-201ENST00000410467 104 ntBASIC0.07□□□□□ -2.4
SND1-IT1Q9HBX3 RNU6-705P-201ENST00000410601 104 ntBASIC0.07□□□□□ -2.4
SND1-IT1Q9HBX3 RNU6-1100P-201ENST00000410691 104 ntBASIC0.07□□□□□ -2.4
SND1-IT1Q9HBX3 RNU6-860P-201ENST00000410860 104 ntBASIC0.07□□□□□ -2.4
SND1-IT1Q9HBX3 RNU6-1217P-201ENST00000411276 104 ntBASIC0.07□□□□□ -2.4
SND1-IT1Q9HBX3 RNU6-785P-201ENST00000411324 104 ntBASIC0.07□□□□□ -2.4
SND1-IT1Q9HBX3 AC090844.1-201ENST00000422019 156 ntBASIC0.07□□□□□ -2.4
SND1-IT1Q9HBX3 AC096644.2-201ENST00000429278 159 ntBASIC0.07□□□□□ -2.4
SND1-IT1Q9HBX3 AC236972.2-201ENST00000434979 310 ntBASIC0.07□□□□□ -2.4
SND1-IT1Q9HBX3 RNU6-237P-201ENST00000515985 71 ntBASIC0.07□□□□□ -2.4
SND1-IT1Q9HBX3 RNU6-699P-201ENST00000517081 110 ntBASIC0.07□□□□□ -2.4
SND1-IT1Q9HBX3 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.07□□□□□ -2.4
SND1-IT1Q9HBX3 MIR4452-201ENST00000583004 71 ntBASIC0.07□□□□□ -2.4
SND1-IT1Q9HBX3 AP000942.4-201ENST00000604811 241 ntBASIC0.07□□□□□ -2.4
SND1-IT1Q9HBX3 U6.90-201ENST00000614007 104 ntBASIC0.07□□□□□ -2.4
SND1-IT1Q9HBX3 MIR6740-201ENST00000618268 113 ntBASIC0.07□□□□□ -2.4
SND1-IT1Q9HBX3 U6.70-201ENST00000620287 104 ntBASIC0.07□□□□□ -2.4
SND1-IT1Q9HBX3 AC078938.1-201ENST00000620993 318 ntBASIC0.07□□□□□ -2.4
SND1-IT1Q9HBX3 SNORD38B-202ENST00000625943 69 ntBASIC0.07□□□□□ -2.4
SND1-IT1Q9HBX3 MIR4315-1-201ENST00000636800 73 ntBASIC0.07□□□□□ -2.4
SND1-IT1Q9HBX3 Z97988.1-201ENST00000637697 135 ntBASIC0.07□□□□□ -2.4
SND1-IT1Q9HBX3 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.07□□□□□ -2.4
SND1-IT1Q9HBX3 MIR4315-2-201ENST00000640925 73 ntBASIC0.07□□□□□ -2.4
SND1-IT1Q9HBX3 Y_RNA.241-201ENST00000364470 117 ntBASIC0.06□□□□□ -2.4
SND1-IT1Q9HBX3 Y_RNA.259-201ENST00000364619 101 ntBASIC0.06□□□□□ -2.4
SND1-IT1Q9HBX3 RNY3-201ENST00000365484 102 ntBASIC0.06□□□□□ -2.4
SND1-IT1Q9HBX3 Y_RNA.458-201ENST00000384240 102 ntBASIC0.06□□□□□ -2.4
SND1-IT1Q9HBX3 RNU6-364P-201ENST00000384387 107 ntBASIC0.06□□□□□ -2.4
SND1-IT1Q9HBX3 Y_RNA.526-201ENST00000384572 110 ntBASIC0.06□□□□□ -2.4
SND1-IT1Q9HBX3 RNU6-679P-201ENST00000391003 106 ntBASIC0.06□□□□□ -2.4
SND1-IT1Q9HBX3 RNA5SP299-201ENST00000391203 116 ntBASIC0.06□□□□□ -2.4
SND1-IT1Q9HBX3 MIR1295A-201ENST00000408463 79 ntBASIC0.06□□□□□ -2.4
SND1-IT1Q9HBX3 RNU7-67P-201ENST00000459003 62 ntBASIC0.06□□□□□ -2.4
SND1-IT1Q9HBX3 RNU7-53P-201ENST00000516705 60 ntBASIC0.06□□□□□ -2.4
SND1-IT1Q9HBX3 SNORD116.3-201ENST00000517176 78 ntBASIC0.06□□□□□ -2.4
SND1-IT1Q9HBX3 MIR3145-201ENST00000580727 82 ntBASIC0.06□□□□□ -2.4
SND1-IT1Q9HBX3 SNORD92-201ENST00000585078 85 ntBASIC0.06□□□□□ -2.4
SND1-IT1Q9HBX3 RPS29P30-201ENST00000600975 111 ntBASIC0.06□□□□□ -2.4
SND1-IT1Q9HBX3 AC093783.1-201ENST00000612976 329 ntBASIC0.06□□□□□ -2.4
SND1-IT1Q9HBX3 AC022140.2-201ENST00000623500 188 ntBASIC0.06□□□□□ -2.4
SND1-IT1Q9HBX3 AC010332.2-201ENST00000613083 1904 ntBASIC0.06□□□□□ -2.4
SND1-IT1Q9HBX3 SNORA42.1-201ENST00000363515 137 ntBASIC0.05□□□□□ -2.4
SND1-IT1Q9HBX3 RNU6-899P-201ENST00000363947 107 ntBASIC0.05□□□□□ -2.4
SND1-IT1Q9HBX3 RNU4-40P-201ENST00000364351 143 ntBASIC0.05□□□□□ -2.4
SND1-IT1Q9HBX3 RNU1-133P-201ENST00000364867 167 ntBASIC0.05□□□□□ -2.4
SND1-IT1Q9HBX3 RNU6-1138P-201ENST00000365359 106 ntBASIC0.05□□□□□ -2.4
SND1-IT1Q9HBX3 RNU6-144P-201ENST00000383951 107 ntBASIC0.05□□□□□ -2.4
SND1-IT1Q9HBX3 Y_RNA.439-201ENST00000384119 94 ntBASIC0.05□□□□□ -2.4
SND1-IT1Q9HBX3 SNORA8.2-201ENST00000384372 139 ntBASIC0.05□□□□□ -2.4
SND1-IT1Q9HBX3 MT-TL1-201ENST00000386347 75 ntBASIC0.05□□□□□ -2.4
SND1-IT1Q9HBX3 MT-TF-201ENST00000387314 71 ntBASIC0.05□□□□□ -2.4
SND1-IT1Q9HBX3 RNY4P36-201ENST00000391116 96 ntBASIC0.05□□□□□ -2.4
SND1-IT1Q9HBX3 RNU6-1165P-201ENST00000410119 107 ntBASIC0.05□□□□□ -2.4
SND1-IT1Q9HBX3 RNA5SP247-201ENST00000411181 105 ntBASIC0.05□□□□□ -2.4
SND1-IT1Q9HBX3 POLR2KP2-201ENST00000438155 177 ntBASIC0.05□□□□□ -2.4
SND1-IT1Q9HBX3 RNU7-102P-201ENST00000458948 62 ntBASIC0.05□□□□□ -2.4
SND1-IT1Q9HBX3 SNORA40.14-201ENST00000516543 86 ntBASIC0.05□□□□□ -2.4
SND1-IT1Q9HBX3 AL021707.8-201ENST00000609428 183 ntBASIC0.05□□□□□ -2.4
SND1-IT1Q9HBX3 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.05□□□□□ -2.4
SND1-IT1Q9HBX3 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.05□□□□□ -2.4
SND1-IT1Q9HBX3 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.05□□□□□ -2.4
SND1-IT1Q9HBX3 Y_RNA.39-201ENST00000362620 98 ntBASIC0.04□□□□□ -2.4
SND1-IT1Q9HBX3 RNU4-80P-201ENST00000363200 141 ntBASIC0.04□□□□□ -2.4
SND1-IT1Q9HBX3 Y_RNA.383-201ENST00000383855 97 ntBASIC0.04□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms