Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 SNORA11.4-201ENST00000408823 129 ntBASIC2.24□□□□□ -2.05
SEC61A2Q9H9S3 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.24□□□□□ -2.05
SEC61A2Q9H9S3 HMGN2P32-201ENST00000444648 269 ntBASIC2.24□□□□□ -2.05
SEC61A2Q9H9S3 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.24□□□□□ -2.05
SEC61A2Q9H9S3 RNA5SP320-201ENST00000516263 124 ntBASIC2.24□□□□□ -2.05
SEC61A2Q9H9S3 RNA5SP282-201ENST00000516355 108 ntBASIC2.24□□□□□ -2.05
SEC61A2Q9H9S3 RNA5SP148-201ENST00000516527 94 ntBASIC2.24□□□□□ -2.05
SEC61A2Q9H9S3 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.24□□□□□ -2.05
SEC61A2Q9H9S3 AC084364.2-201ENST00000546924 395 ntBASIC2.24□□□□□ -2.05
SEC61A2Q9H9S3 AL137847.3-201ENST00000611521 109 ntBASIC2.24□□□□□ -2.05
SEC61A2Q9H9S3 MIR6817-201ENST00000615588 66 ntBASIC2.24□□□□□ -2.05
SEC61A2Q9H9S3 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.24□□□□□ -2.05
SEC61A2Q9H9S3 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
SEC61A2Q9H9S3 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
SEC61A2Q9H9S3 MIR449A-201ENST00000362113 91 ntBASIC2.23□□□□□ -2.05
SEC61A2Q9H9S3 Y_RNA.163-201ENST00000363702 113 ntBASIC2.23□□□□□ -2.05
SEC61A2Q9H9S3 Y_RNA.198-201ENST00000364013 98 ntBASIC2.23□□□□□ -2.05
SEC61A2Q9H9S3 RNU4-16P-201ENST00000364737 141 ntBASIC2.23□□□□□ -2.05
SEC61A2Q9H9S3 Y_RNA.336-201ENST00000365307 109 ntBASIC2.23□□□□□ -2.05
SEC61A2Q9H9S3 RNY1P6-201ENST00000384193 109 ntBASIC2.23□□□□□ -2.05
SEC61A2Q9H9S3 HSPE1P9-201ENST00000440046 311 ntBASIC2.23□□□□□ -2.05
SEC61A2Q9H9S3 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.23□□□□□ -2.05
SEC61A2Q9H9S3 RNU7-26P-201ENST00000458980 63 ntBASIC2.23□□□□□ -2.05
SEC61A2Q9H9S3 RPL39P34-201ENST00000477141 156 ntBASIC2.23□□□□□ -2.05
SEC61A2Q9H9S3 RNU6-830P-201ENST00000516353 107 ntBASIC2.23□□□□□ -2.05
SEC61A2Q9H9S3 Y_RNA.694-201ENST00000516677 117 ntBASIC2.23□□□□□ -2.05
SEC61A2Q9H9S3 MIR5094-201ENST00000578766 85 ntBASIC2.23□□□□□ -2.05
SEC61A2Q9H9S3 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
SEC61A2Q9H9S3 AL589743.1-201ENST00000551932 2712 ntBASIC2.22□□□□□ -2.05
SEC61A2Q9H9S3 RNU1-58P-201ENST00000362413 163 ntBASIC2.22□□□□□ -2.05
SEC61A2Q9H9S3 RNA5SP68-201ENST00000363885 119 ntBASIC2.22□□□□□ -2.05
SEC61A2Q9H9S3 Y_RNA.298-201ENST00000364960 107 ntBASIC2.22□□□□□ -2.05
SEC61A2Q9H9S3 Y_RNA.362-201ENST00000365518 110 ntBASIC2.22□□□□□ -2.05
SEC61A2Q9H9S3 RNU6-1014P-201ENST00000383940 103 ntBASIC2.22□□□□□ -2.05
SEC61A2Q9H9S3 SNORA51.5-201ENST00000384126 131 ntBASIC2.22□□□□□ -2.05
SEC61A2Q9H9S3 SNORA51.10-201ENST00000384418 136 ntBASIC2.22□□□□□ -2.05
SEC61A2Q9H9S3 Y_RNA.500-201ENST00000384466 111 ntBASIC2.22□□□□□ -2.05
SEC61A2Q9H9S3 MIR597-201ENST00000384968 97 ntBASIC2.22□□□□□ -2.05
SEC61A2Q9H9S3 RNU7-164P-201ENST00000459221 62 ntBASIC2.22□□□□□ -2.05
SEC61A2Q9H9S3 RPL23AP94-201ENST00000512518 302 ntBASIC2.22□□□□□ -2.05
SEC61A2Q9H9S3 SNORA31.10-201ENST00000516482 106 ntBASIC2.22□□□□□ -2.05
SEC61A2Q9H9S3 RNU7-28P-201ENST00000516759 62 ntBASIC2.22□□□□□ -2.05
SEC61A2Q9H9S3 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.22□□□□□ -2.05
SEC61A2Q9H9S3 AC022523.2-201ENST00000561045 150 ntBASIC2.22□□□□□ -2.05
SEC61A2Q9H9S3 MIR3126-201ENST00000577443 74 ntBASIC2.22□□□□□ -2.05
SEC61A2Q9H9S3 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
SEC61A2Q9H9S3 Y_RNA.213-201ENST00000364178 111 ntBASIC2.21□□□□□ -2.06
SEC61A2Q9H9S3 RNU6-1104P-201ENST00000384723 104 ntBASIC2.21□□□□□ -2.06
SEC61A2Q9H9S3 MIR1302-5-201ENST00000408164 150 ntBASIC2.21□□□□□ -2.06
SEC61A2Q9H9S3 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.21□□□□□ -2.06
SEC61A2Q9H9S3 AC069114.2-201ENST00000604699 304 ntBASIC2.21□□□□□ -2.06
SEC61A2Q9H9S3 DLEU2_5.2-201ENST00000610606 84 ntBASIC2.21□□□□□ -2.06
SEC61A2Q9H9S3 AC091932.4-201ENST00000623386 200 ntBASIC2.21□□□□□ -2.06
SEC61A2Q9H9S3 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
SEC61A2Q9H9S3 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
SEC61A2Q9H9S3 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.2□□□□□ -2.06
SEC61A2Q9H9S3 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
SEC61A2Q9H9S3 RNU6-766P-201ENST00000362478 107 ntBASIC2.2□□□□□ -2.06
SEC61A2Q9H9S3 RNY4P6-201ENST00000363667 96 ntBASIC2.2□□□□□ -2.06
SEC61A2Q9H9S3 Y_RNA.328-201ENST00000365208 113 ntBASIC2.2□□□□□ -2.06
SEC61A2Q9H9S3 SNORD38C-201ENST00000384381 69 ntBASIC2.2□□□□□ -2.06
SEC61A2Q9H9S3 MIR27B-201ENST00000385129 97 ntBASIC2.2□□□□□ -2.06
SEC61A2Q9H9S3 MIR759-201ENST00000390224 91 ntBASIC2.2□□□□□ -2.06
SEC61A2Q9H9S3 RNU11-3P-201ENST00000391111 133 ntBASIC2.2□□□□□ -2.06
SEC61A2Q9H9S3 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.2□□□□□ -2.06
SEC61A2Q9H9S3 RNU7-123P-201ENST00000515911 60 ntBASIC2.2□□□□□ -2.06
SEC61A2Q9H9S3 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC2.2□□□□□ -2.06
SEC61A2Q9H9S3 AC005786.1-201ENST00000588553 154 ntBASIC2.2□□□□□ -2.06
SEC61A2Q9H9S3 AL449363.1-201ENST00000617815 186 ntBASIC2.2□□□□□ -2.06
SEC61A2Q9H9S3 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
SEC61A2Q9H9S3 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
SEC61A2Q9H9S3 MIRLET7C-201ENST00000362160 84 ntBASIC2.19□□□□□ -2.06
SEC61A2Q9H9S3 Y_RNA.49-201ENST00000362714 112 ntBASIC2.19□□□□□ -2.06
SEC61A2Q9H9S3 RNU6-1019P-201ENST00000364424 107 ntBASIC2.19□□□□□ -2.06
SEC61A2Q9H9S3 Y_RNA.241-201ENST00000364470 117 ntBASIC2.19□□□□□ -2.06
SEC61A2Q9H9S3 Y_RNA.494-201ENST00000384432 111 ntBASIC2.19□□□□□ -2.06
SEC61A2Q9H9S3 RNU6-905P-201ENST00000384434 107 ntBASIC2.19□□□□□ -2.06
SEC61A2Q9H9S3 RNU7-80P-201ENST00000459562 61 ntBASIC2.19□□□□□ -2.06
SEC61A2Q9H9S3 MIR4658-201ENST00000584344 65 ntBASIC2.19□□□□□ -2.06
SEC61A2Q9H9S3 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.19□□□□□ -2.06
SEC61A2Q9H9S3 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
SEC61A2Q9H9S3 RNA5SP456-201ENST00000364002 114 ntBASIC2.18□□□□□ -2.06
SEC61A2Q9H9S3 SNORA4.2-201ENST00000365313 147 ntBASIC2.18□□□□□ -2.06
SEC61A2Q9H9S3 Y_RNA.348-201ENST00000365403 103 ntBASIC2.18□□□□□ -2.06
SEC61A2Q9H9S3 RNU1-148P-201ENST00000384472 162 ntBASIC2.18□□□□□ -2.06
SEC61A2Q9H9S3 U8.16-201ENST00000391279 133 ntBASIC2.18□□□□□ -2.06
SEC61A2Q9H9S3 AC087499.4-201ENST00000448505 178 ntBASIC2.18□□□□□ -2.06
SEC61A2Q9H9S3 SNORA72.7-201ENST00000516349 94 ntBASIC2.18□□□□□ -2.06
SEC61A2Q9H9S3 RNU2-35P-201ENST00000516446 142 ntBASIC2.18□□□□□ -2.06
SEC61A2Q9H9S3 RNA5SP281-201ENST00000516504 135 ntBASIC2.18□□□□□ -2.06
SEC61A2Q9H9S3 RNU7-181P-201ENST00000517234 74 ntBASIC2.18□□□□□ -2.06
SEC61A2Q9H9S3 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.18□□□□□ -2.06
SEC61A2Q9H9S3 IGKV3-31-201ENST00000523109 329 ntBASIC2.18□□□□□ -2.06
SEC61A2Q9H9S3 MIR4305-201ENST00000583252 102 ntBASIC2.18□□□□□ -2.06
SEC61A2Q9H9S3 SNORA28-201ENST00000606769 126 ntBASIC2.18□□□□□ -2.06
SEC61A2Q9H9S3 U4.3-201ENST00000621047 82 ntBASIC2.18□□□□□ -2.06
SEC61A2Q9H9S3 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
SEC61A2Q9H9S3 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
SEC61A2Q9H9S3 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
SEC61A2Q9H9S3 RNU4-82P-201ENST00000362443 140 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 171.4 ms