Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 Y_RNA.757-201ENST00000578934 114 ntBASIC1.97□□□□□ -2.09
EBF3Q9H4W6 AC091178.2-201ENST00000584401 117 ntBASIC1.97□□□□□ -2.09
EBF3Q9H4W6 AP000942.3-201ENST00000603702 160 ntBASIC1.97□□□□□ -2.09
EBF3Q9H4W6 AC073413.2-201ENST00000604332 360 ntBASIC1.97□□□□□ -2.09
EBF3Q9H4W6 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.97□□□□□ -2.09
EBF3Q9H4W6 Y_RNA.52-201ENST00000362760 96 ntBASIC1.96□□□□□ -2.1
EBF3Q9H4W6 snoU2-30.2-201ENST00000362805 70 ntBASIC1.96□□□□□ -2.1
EBF3Q9H4W6 SNORA33-201ENST00000363664 130 ntBASIC1.96□□□□□ -2.1
EBF3Q9H4W6 RNU6-755P-201ENST00000364400 103 ntBASIC1.96□□□□□ -2.1
EBF3Q9H4W6 SNORD58C-201ENST00000365223 64 ntBASIC1.96□□□□□ -2.1
EBF3Q9H4W6 MIR29C-201ENST00000385231 88 ntBASIC1.96□□□□□ -2.1
EBF3Q9H4W6 SNORD72-201ENST00000390994 80 ntBASIC1.96□□□□□ -2.1
EBF3Q9H4W6 RNA5SP467-201ENST00000391274 118 ntBASIC1.96□□□□□ -2.1
EBF3Q9H4W6 AL603914.1-201ENST00000401964 204 ntBASIC1.96□□□□□ -2.1
EBF3Q9H4W6 MIR1253-201ENST00000408273 105 ntBASIC1.96□□□□□ -2.1
EBF3Q9H4W6 RNU2-40P-201ENST00000410833 196 ntBASIC1.96□□□□□ -2.1
EBF3Q9H4W6 RNA5SP489-201ENST00000410986 109 ntBASIC1.96□□□□□ -2.1
EBF3Q9H4W6 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.96□□□□□ -2.1
EBF3Q9H4W6 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.96□□□□□ -2.1
EBF3Q9H4W6 RPS26P45-201ENST00000471748 340 ntBASIC1.96□□□□□ -2.1
EBF3Q9H4W6 Y_RNA.690-201ENST00000516603 95 ntBASIC1.96□□□□□ -2.1
EBF3Q9H4W6 RNA5SP137-201ENST00000516833 135 ntBASIC1.96□□□□□ -2.1
EBF3Q9H4W6 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.96□□□□□ -2.1
EBF3Q9H4W6 IGKV1-22-201ENST00000524313 326 ntBASIC1.96□□□□□ -2.1
EBF3Q9H4W6 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.96□□□□□ -2.1
EBF3Q9H4W6 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.95□□□□□ -2.1
EBF3Q9H4W6 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.95□□□□□ -2.1
EBF3Q9H4W6 SNORA22-201ENST00000383907 134 ntBASIC1.95□□□□□ -2.1
EBF3Q9H4W6 MIRLET7F2-201ENST00000385277 83 ntBASIC1.95□□□□□ -2.1
EBF3Q9H4W6 MIR891A-201ENST00000401237 79 ntBASIC1.95□□□□□ -2.1
EBF3Q9H4W6 RNU6-1186P-201ENST00000410429 97 ntBASIC1.95□□□□□ -2.1
EBF3Q9H4W6 AC063976.4-201ENST00000421971 163 ntBASIC1.95□□□□□ -2.1
EBF3Q9H4W6 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.95□□□□□ -2.1
EBF3Q9H4W6 RNA5SP233-201ENST00000459153 113 ntBASIC1.95□□□□□ -2.1
EBF3Q9H4W6 OR9P1P-201ENST00000496431 281 ntBASIC1.95□□□□□ -2.1
EBF3Q9H4W6 CYCTP-201ENST00000504253 315 ntBASIC1.95□□□□□ -2.1
EBF3Q9H4W6 MRPS17P9-201ENST00000511924 393 ntBASIC1.95□□□□□ -2.1
EBF3Q9H4W6 RNU6-1061P-201ENST00000516530 99 ntBASIC1.95□□□□□ -2.1
EBF3Q9H4W6 RNU6-1291P-201ENST00000516591 104 ntBASIC1.95□□□□□ -2.1
EBF3Q9H4W6 MIR3613-201ENST00000579844 87 ntBASIC1.95□□□□□ -2.1
EBF3Q9H4W6 MIR2681-201ENST00000581814 105 ntBASIC1.95□□□□□ -2.1
EBF3Q9H4W6 AC012493.3-201ENST00000604494 112 ntBASIC1.95□□□□□ -2.1
EBF3Q9H4W6 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.95□□□□□ -2.1
EBF3Q9H4W6 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.95□□□□□ -2.1
EBF3Q9H4W6 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
EBF3Q9H4W6 Y_RNA.35-201ENST00000362601 101 ntBASIC1.94□□□□□ -2.1
EBF3Q9H4W6 RNA5SP493-201ENST00000364115 91 ntBASIC1.94□□□□□ -2.1
EBF3Q9H4W6 Y_RNA.253-201ENST00000364562 112 ntBASIC1.94□□□□□ -2.1
EBF3Q9H4W6 Y_RNA.338-201ENST00000365320 114 ntBASIC1.94□□□□□ -2.1
EBF3Q9H4W6 MIR17-201ENST00000385012 84 ntBASIC1.94□□□□□ -2.1
EBF3Q9H4W6 SNORA12.1-201ENST00000390873 148 ntBASIC1.94□□□□□ -2.1
EBF3Q9H4W6 RNA5SP270-201ENST00000411361 118 ntBASIC1.94□□□□□ -2.1
EBF3Q9H4W6 RNU5E-3P-201ENST00000515913 68 ntBASIC1.94□□□□□ -2.1
EBF3Q9H4W6 AC133485.4-201ENST00000561835 220 ntBASIC1.94□□□□□ -2.1
EBF3Q9H4W6 AC138907.4-201ENST00000570107 226 ntBASIC1.94□□□□□ -2.1
EBF3Q9H4W6 MIR3126-201ENST00000577443 74 ntBASIC1.94□□□□□ -2.1
EBF3Q9H4W6 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.94□□□□□ -2.1
EBF3Q9H4W6 AL365205.2-201ENST00000594586 68 ntBASIC1.94□□□□□ -2.1
EBF3Q9H4W6 MIR338-201ENST00000636369 67 ntBASIC1.94□□□□□ -2.1
EBF3Q9H4W6 U6.95-201ENST00000636931 70 ntBASIC1.94□□□□□ -2.1
EBF3Q9H4W6 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
EBF3Q9H4W6 RNU6-147P-201ENST00000383983 107 ntBASIC1.93□□□□□ -2.1
EBF3Q9H4W6 SNORD61-201ENST00000384252 73 ntBASIC1.93□□□□□ -2.1
EBF3Q9H4W6 MIR548A2-201ENST00000384956 97 ntBASIC1.93□□□□□ -2.1
EBF3Q9H4W6 MIR624-201ENST00000385217 97 ntBASIC1.93□□□□□ -2.1
EBF3Q9H4W6 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
EBF3Q9H4W6 AL117342.1-201ENST00000404861 406 ntBASIC1.93□□□□□ -2.1
EBF3Q9H4W6 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.93□□□□□ -2.1
EBF3Q9H4W6 ATP5J2P3-201ENST00000451550 258 ntBASIC1.93□□□□□ -2.1
EBF3Q9H4W6 RNA5SP236-201ENST00000516169 116 ntBASIC1.93□□□□□ -2.1
EBF3Q9H4W6 RNU6-1041P-201ENST00000516254 102 ntBASIC1.93□□□□□ -2.1
EBF3Q9H4W6 MIR3169-201ENST00000578032 83 ntBASIC1.93□□□□□ -2.1
EBF3Q9H4W6 MIR3129-201ENST00000581095 76 ntBASIC1.93□□□□□ -2.1
EBF3Q9H4W6 MIR8081-201ENST00000611533 95 ntBASIC1.93□□□□□ -2.1
EBF3Q9H4W6 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.93□□□□□ -2.1
EBF3Q9H4W6 MIR376A2-201ENST00000636782 80 ntBASIC1.93□□□□□ -2.1
EBF3Q9H4W6 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.93□□□□□ -2.1
EBF3Q9H4W6 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
EBF3Q9H4W6 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
EBF3Q9H4W6 MIR515-2-201ENST00000384883 83 ntBASIC1.92□□□□□ -2.1
EBF3Q9H4W6 MIR515-1-201ENST00000384884 83 ntBASIC1.92□□□□□ -2.1
EBF3Q9H4W6 MIR9-3-201ENST00000385084 90 ntBASIC1.92□□□□□ -2.1
EBF3Q9H4W6 SNORA17.3-201ENST00000391159 129 ntBASIC1.92□□□□□ -2.1
EBF3Q9H4W6 RNA5SP127-201ENST00000411051 133 ntBASIC1.92□□□□□ -2.1
EBF3Q9H4W6 Y_RNA.621-201ENST00000411065 96 ntBASIC1.92□□□□□ -2.1
EBF3Q9H4W6 AC108667.1-201ENST00000428618 249 ntBASIC1.92□□□□□ -2.1
EBF3Q9H4W6 AC233266.1-201ENST00000454518 96 ntBASIC1.92□□□□□ -2.1
EBF3Q9H4W6 RNU7-99P-201ENST00000516271 62 ntBASIC1.92□□□□□ -2.1
EBF3Q9H4W6 SNORA25.15-201ENST00000516487 89 ntBASIC1.92□□□□□ -2.1
EBF3Q9H4W6 RNU7-193P-201ENST00000516723 65 ntBASIC1.92□□□□□ -2.1
EBF3Q9H4W6 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.92□□□□□ -2.1
EBF3Q9H4W6 AC007229.1-201ENST00000590455 412 ntBASIC1.92□□□□□ -2.1
EBF3Q9H4W6 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
EBF3Q9H4W6 AL022345.2-201ENST00000606307 135 ntBASIC1.92□□□□□ -2.1
EBF3Q9H4W6 AC242852.1-201ENST00000612151 96 ntBASIC1.92□□□□□ -2.1
EBF3Q9H4W6 AC022202.1-201ENST00000613515 211 ntBASIC1.92□□□□□ -2.1
EBF3Q9H4W6 JPX_2.1-201ENST00000614161 69 ntBASIC1.92□□□□□ -2.1
EBF3Q9H4W6 AC244015.1-201ENST00000622301 99 ntBASIC1.92□□□□□ -2.1
EBF3Q9H4W6 AC084768.2-201ENST00000622736 221 ntBASIC1.92□□□□□ -2.1
EBF3Q9H4W6 AL359851.1-201ENST00000569460 4997 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 214.7 ms