Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 MIR4795-201ENST00000584182 89 ntBASIC0.6□□□□□ -2.31
DDX47Q9H0S4 MIR4791-201ENST00000607666 84 ntBASIC0.6□□□□□ -2.31
DDX47Q9H0S4 AC007485.1-201ENST00000616755 206 ntBASIC0.6□□□□□ -2.31
DDX47Q9H0S4 MTND1P7-201ENST00000632801 297 ntBASIC0.6□□□□□ -2.31
DDX47Q9H0S4 RNU4-73P-201ENST00000363164 141 ntBASIC0.59□□□□□ -2.31
DDX47Q9H0S4 Y_RNA.112-201ENST00000363250 102 ntBASIC0.59□□□□□ -2.31
DDX47Q9H0S4 Y_RNA.197-201ENST00000364004 102 ntBASIC0.59□□□□□ -2.31
DDX47Q9H0S4 Y_RNA.222-201ENST00000364264 102 ntBASIC0.59□□□□□ -2.31
DDX47Q9H0S4 Y_RNA.269-201ENST00000364685 89 ntBASIC0.59□□□□□ -2.31
DDX47Q9H0S4 Y_RNA.508-201ENST00000384502 114 ntBASIC0.59□□□□□ -2.31
DDX47Q9H0S4 SNORD105-201ENST00000386910 85 ntBASIC0.59□□□□□ -2.31
DDX47Q9H0S4 MTND3P22-201ENST00000510932 243 ntBASIC0.59□□□□□ -2.31
DDX47Q9H0S4 RNU6-191P-201ENST00000516295 94 ntBASIC0.59□□□□□ -2.31
DDX47Q9H0S4 RNU6-1007P-201ENST00000516586 107 ntBASIC0.59□□□□□ -2.31
DDX47Q9H0S4 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.59□□□□□ -2.31
DDX47Q9H0S4 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
DDX47Q9H0S4 MIR4714-201ENST00000580728 77 ntBASIC0.59□□□□□ -2.31
DDX47Q9H0S4 MIR4300-201ENST00000581016 96 ntBASIC0.59□□□□□ -2.31
DDX47Q9H0S4 AC104695.3-201ENST00000604052 296 ntBASIC0.59□□□□□ -2.31
DDX47Q9H0S4 uc_338.22-201ENST00000622722 187 ntBASIC0.59□□□□□ -2.31
DDX47Q9H0S4 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.32
DDX47Q9H0S4 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
DDX47Q9H0S4 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.58□□□□□ -2.32
DDX47Q9H0S4 MIR1-1-201ENST00000362147 71 ntBASIC0.58□□□□□ -2.32
DDX47Q9H0S4 Y_RNA.242-201ENST00000364473 110 ntBASIC0.58□□□□□ -2.32
DDX47Q9H0S4 SNORA1.2-201ENST00000365189 134 ntBASIC0.58□□□□□ -2.32
DDX47Q9H0S4 Y_RNA.395-201ENST00000383945 109 ntBASIC0.58□□□□□ -2.32
DDX47Q9H0S4 Y_RNA.418-201ENST00000384029 102 ntBASIC0.58□□□□□ -2.32
DDX47Q9H0S4 MIR1302-11-201ENST00000408051 138 ntBASIC0.58□□□□□ -2.32
DDX47Q9H0S4 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.58□□□□□ -2.32
DDX47Q9H0S4 MIR1302-9-201ENST00000408365 138 ntBASIC0.58□□□□□ -2.32
DDX47Q9H0S4 MIR1302-10-201ENST00000408734 138 ntBASIC0.58□□□□□ -2.32
DDX47Q9H0S4 AL157398.1-201ENST00000452981 186 ntBASIC0.58□□□□□ -2.32
DDX47Q9H0S4 snoU13.18-201ENST00000459483 104 ntBASIC0.58□□□□□ -2.32
DDX47Q9H0S4 RNU2-13P-201ENST00000515909 113 ntBASIC0.58□□□□□ -2.32
DDX47Q9H0S4 RNU6-1046P-201ENST00000516538 107 ntBASIC0.58□□□□□ -2.32
DDX47Q9H0S4 LARP7P1-201ENST00000605576 316 ntBASIC0.58□□□□□ -2.32
DDX47Q9H0S4 MIR1302-2-201ENST00000607096 138 ntBASIC0.58□□□□□ -2.32
DDX47Q9H0S4 AC022709.1-201ENST00000615967 87 ntBASIC0.58□□□□□ -2.32
DDX47Q9H0S4 Y_RNA.645-201ENST00000391229 102 ntBASIC0.57□□□□□ -2.32
DDX47Q9H0S4 RNU4-54P-201ENST00000516428 129 ntBASIC0.57□□□□□ -2.32
DDX47Q9H0S4 AL133255.1-201ENST00000606374 441 ntBASIC0.57□□□□□ -2.32
DDX47Q9H0S4 MIR377-201ENST00000362145 69 ntBASIC0.56□□□□□ -2.32
DDX47Q9H0S4 RNU6-369P-201ENST00000362515 102 ntBASIC0.56□□□□□ -2.32
DDX47Q9H0S4 SNORD113-8-201ENST00000363497 74 ntBASIC0.56□□□□□ -2.32
DDX47Q9H0S4 Y_RNA.354-201ENST00000365448 111 ntBASIC0.56□□□□□ -2.32
DDX47Q9H0S4 SNORD42.2-201ENST00000365570 69 ntBASIC0.56□□□□□ -2.32
DDX47Q9H0S4 RNU6-102P-201ENST00000384485 104 ntBASIC0.56□□□□□ -2.32
DDX47Q9H0S4 MT-TN-201ENST00000387400 73 ntBASIC0.56□□□□□ -2.32
DDX47Q9H0S4 RNU6-308P-201ENST00000390957 107 ntBASIC0.56□□□□□ -2.32
DDX47Q9H0S4 RNU6-847P-201ENST00000411115 108 ntBASIC0.56□□□□□ -2.32
DDX47Q9H0S4 SCARNA8-201ENST00000515924 131 ntBASIC0.56□□□□□ -2.32
DDX47Q9H0S4 uc_338.17-201ENST00000619633 179 ntBASIC0.56□□□□□ -2.32
DDX47Q9H0S4 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
DDX47Q9H0S4 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.55□□□□□ -2.32
DDX47Q9H0S4 Y_RNA.31-201ENST00000362574 102 ntBASIC0.55□□□□□ -2.32
DDX47Q9H0S4 SNORD45.3-201ENST00000363836 72 ntBASIC0.55□□□□□ -2.32
DDX47Q9H0S4 RNU6-899P-201ENST00000363947 107 ntBASIC0.55□□□□□ -2.32
DDX47Q9H0S4 RNU6-580P-201ENST00000365159 107 ntBASIC0.55□□□□□ -2.32
DDX47Q9H0S4 RNU6-945P-201ENST00000383947 107 ntBASIC0.55□□□□□ -2.32
DDX47Q9H0S4 MTND4P19-201ENST00000446659 478 ntBASIC0.55□□□□□ -2.32
DDX47Q9H0S4 snoU13.21-201ENST00000459368 105 ntBASIC0.55□□□□□ -2.32
DDX47Q9H0S4 RNU6-764P-201ENST00000516396 105 ntBASIC0.55□□□□□ -2.32
DDX47Q9H0S4 RNA5SP121-201ENST00000516537 101 ntBASIC0.55□□□□□ -2.32
DDX47Q9H0S4 RNU7-25P-201ENST00000516544 62 ntBASIC0.55□□□□□ -2.32
DDX47Q9H0S4 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.55□□□□□ -2.32
DDX47Q9H0S4 AC243994.1-201ENST00000618627 109 ntBASIC0.55□□□□□ -2.32
DDX47Q9H0S4 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.55□□□□□ -2.32
DDX47Q9H0S4 Y_RNA.136-201ENST00000363444 102 ntBASIC0.54□□□□□ -2.32
DDX47Q9H0S4 RNU1-133P-201ENST00000364867 167 ntBASIC0.54□□□□□ -2.32
DDX47Q9H0S4 Y_RNA.376-201ENST00000365638 108 ntBASIC0.54□□□□□ -2.32
DDX47Q9H0S4 Y_RNA.419-201ENST00000384041 102 ntBASIC0.54□□□□□ -2.32
DDX47Q9H0S4 RNU6-125P-201ENST00000384505 107 ntBASIC0.54□□□□□ -2.32
DDX47Q9H0S4 RNU6-763P-201ENST00000390865 106 ntBASIC0.54□□□□□ -2.32
DDX47Q9H0S4 RNA5SP222-201ENST00000411039 105 ntBASIC0.54□□□□□ -2.32
DDX47Q9H0S4 PMCHL1-202ENST00000423102 261 ntBASIC0.54□□□□□ -2.32
DDX47Q9H0S4 HSPE1P25-201ENST00000455484 251 ntBASIC0.54□□□□□ -2.32
DDX47Q9H0S4 Y_RNA.639-201ENST00000458981 102 ntBASIC0.54□□□□□ -2.32
DDX47Q9H0S4 AC018659.1-201ENST00000551083 169 ntBASIC0.54□□□□□ -2.32
DDX47Q9H0S4 Y_RNA.804-201ENST00000615262 101 ntBASIC0.54□□□□□ -2.32
DDX47Q9H0S4 MIR376A1-201ENST00000616574 68 ntBASIC0.54□□□□□ -2.32
DDX47Q9H0S4 AC022140.2-201ENST00000623500 188 ntBASIC0.54□□□□□ -2.32
DDX47Q9H0S4 MIR369-201ENST00000362155 70 ntBASIC0.53□□□□□ -2.32
DDX47Q9H0S4 Y_RNA.105-201ENST00000363182 111 ntBASIC0.53□□□□□ -2.32
DDX47Q9H0S4 Y_RNA.424-201ENST00000384063 103 ntBASIC0.53□□□□□ -2.32
DDX47Q9H0S4 Y_RNA.547-201ENST00000384654 119 ntBASIC0.53□□□□□ -2.32
DDX47Q9H0S4 RNU6-205P-201ENST00000390858 107 ntBASIC0.53□□□□□ -2.32
DDX47Q9H0S4 Y_RNA.602-201ENST00000410535 92 ntBASIC0.53□□□□□ -2.32
DDX47Q9H0S4 RNU6-1170P-201ENST00000515974 106 ntBASIC0.53□□□□□ -2.32
DDX47Q9H0S4 RNU6-496P-201ENST00000516145 99 ntBASIC0.53□□□□□ -2.32
DDX47Q9H0S4 Y_RNA.715-201ENST00000517082 110 ntBASIC0.53□□□□□ -2.32
DDX47Q9H0S4 C8orf59P2-201ENST00000603441 271 ntBASIC0.53□□□□□ -2.32
DDX47Q9H0S4 RAC1P9-201ENST00000604990 392 ntBASIC0.53□□□□□ -2.32
DDX47Q9H0S4 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.32
DDX47Q9H0S4 RNU6-1205P-201ENST00000363625 106 ntBASIC0.52□□□□□ -2.33
DDX47Q9H0S4 RNU6-144P-201ENST00000383951 107 ntBASIC0.52□□□□□ -2.33
DDX47Q9H0S4 RNY1P8-201ENST00000383970 114 ntBASIC0.52□□□□□ -2.33
DDX47Q9H0S4 Y_RNA.445-201ENST00000384168 102 ntBASIC0.52□□□□□ -2.33
DDX47Q9H0S4 Y_RNA.509-201ENST00000384506 99 ntBASIC0.52□□□□□ -2.33
DDX47Q9H0S4 SNORD115-46-201ENST00000390982 71 ntBASIC0.52□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 141.8 ms