Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 AC138869.1-201ENST00000568623 124 ntBASIC-0.57□□□□□ -2.5
UPF3BQ9BZI7 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC-0.57□□□□□ -2.5
UPF3BQ9BZI7 MIR4436A-201ENST00000585278 85 ntBASIC-0.57□□□□□ -2.5
UPF3BQ9BZI7 AC008507.4-201ENST00000585464 127 ntBASIC-0.57□□□□□ -2.5
UPF3BQ9BZI7 RNU1-29P-201ENST00000606574 126 ntBASIC-0.57□□□□□ -2.5
UPF3BQ9BZI7 AC006441.5-201ENST00000612680 209 ntBASIC-0.57□□□□□ -2.5
UPF3BQ9BZI7 Y_RNA.203-201ENST00000364106 102 ntBASIC-0.58□□□□□ -2.5
UPF3BQ9BZI7 RNU6-1323P-201ENST00000384025 107 ntBASIC-0.58□□□□□ -2.5
UPF3BQ9BZI7 RNU6-767P-201ENST00000384132 107 ntBASIC-0.58□□□□□ -2.5
UPF3BQ9BZI7 RNA5SP300-201ENST00000391197 107 ntBASIC-0.58□□□□□ -2.5
UPF3BQ9BZI7 RNU6-192P-201ENST00000391253 100 ntBASIC-0.58□□□□□ -2.5
UPF3BQ9BZI7 Y_RNA.617-201ENST00000410920 90 ntBASIC-0.58□□□□□ -2.5
UPF3BQ9BZI7 RNU6-284P-201ENST00000411105 106 ntBASIC-0.58□□□□□ -2.5
UPF3BQ9BZI7 AC018638.8-201ENST00000588755 281 ntBASIC-0.58□□□□□ -2.5
UPF3BQ9BZI7 AC121247.2-201ENST00000604776 136 ntBASIC-0.58□□□□□ -2.5
UPF3BQ9BZI7 AC091931.1-201ENST00000623488 728 ntBASIC-0.58□□□□□ -2.5
UPF3BQ9BZI7 Z97988.1-201ENST00000637697 135 ntBASIC-0.58□□□□□ -2.5
UPF3BQ9BZI7 MIR30D-201ENST00000362283 70 ntBASIC-0.59□□□□□ -2.5
UPF3BQ9BZI7 RNU6-874P-201ENST00000362390 105 ntBASIC-0.59□□□□□ -2.5
UPF3BQ9BZI7 RNU6-1115P-201ENST00000362490 106 ntBASIC-0.59□□□□□ -2.5
UPF3BQ9BZI7 SNORA32.3-201ENST00000384772 121 ntBASIC-0.59□□□□□ -2.5
UPF3BQ9BZI7 SNORA75.4-201ENST00000391278 119 ntBASIC-0.59□□□□□ -2.5
UPF3BQ9BZI7 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC-0.59□□□□□ -2.5
UPF3BQ9BZI7 RNU7-87P-201ENST00000459343 62 ntBASIC-0.59□□□□□ -2.5
UPF3BQ9BZI7 AC107297.1-201ENST00000459991 176 ntBASIC-0.59□□□□□ -2.5
UPF3BQ9BZI7 AC011352.1-201ENST00000512300 793 ntBASIC-0.59□□□□□ -2.5
UPF3BQ9BZI7 RN7SKP298-201ENST00000515950 94 ntBASIC-0.59□□□□□ -2.5
UPF3BQ9BZI7 RNU7-116P-201ENST00000516940 62 ntBASIC-0.59□□□□□ -2.5
UPF3BQ9BZI7 AC055872.1-201ENST00000570978 278 ntBASIC-0.59□□□□□ -2.5
UPF3BQ9BZI7 MIR8055-201ENST00000610739 97 ntBASIC-0.59□□□□□ -2.5
UPF3BQ9BZI7 JPX_2.1-201ENST00000614161 69 ntBASIC-0.59□□□□□ -2.5
UPF3BQ9BZI7 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.6□□□□□ -2.5
UPF3BQ9BZI7 Y_RNA.32-201ENST00000362589 110 ntBASIC-0.6□□□□□ -2.51
UPF3BQ9BZI7 Y_RNA.174-201ENST00000363781 105 ntBASIC-0.6□□□□□ -2.51
UPF3BQ9BZI7 SNORD116-11-201ENST00000383882 92 ntBASIC-0.6□□□□□ -2.51
UPF3BQ9BZI7 Y_RNA.409-201ENST00000383990 98 ntBASIC-0.6□□□□□ -2.51
UPF3BQ9BZI7 Y_RNA.615-201ENST00000410769 117 ntBASIC-0.6□□□□□ -2.51
UPF3BQ9BZI7 RNU6-1068P-201ENST00000410958 103 ntBASIC-0.6□□□□□ -2.51
UPF3BQ9BZI7 MTCO1P5-201ENST00000433573 344 ntBASIC-0.6□□□□□ -2.51
UPF3BQ9BZI7 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC-0.6□□□□□ -2.51
UPF3BQ9BZI7 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.6□□□□□ -2.51
UPF3BQ9BZI7 RNU6-180P-201ENST00000516697 61 ntBASIC-0.6□□□□□ -2.51
UPF3BQ9BZI7 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC-0.6□□□□□ -2.51
UPF3BQ9BZI7 MIR4788-201ENST00000639104 80 ntBASIC-0.6□□□□□ -2.51
UPF3BQ9BZI7 RNU6-1059P-201ENST00000363752 98 ntBASIC-0.61□□□□□ -2.51
UPF3BQ9BZI7 RNU6-1229P-201ENST00000364295 107 ntBASIC-0.61□□□□□ -2.51
UPF3BQ9BZI7 RNU6-740P-201ENST00000364734 105 ntBASIC-0.61□□□□□ -2.51
UPF3BQ9BZI7 SNORA75-201ENST00000384158 137 ntBASIC-0.61□□□□□ -2.51
UPF3BQ9BZI7 RNU6-842P-201ENST00000384269 107 ntBASIC-0.61□□□□□ -2.51
UPF3BQ9BZI7 SNORD28-201ENST00000384706 75 ntBASIC-0.61□□□□□ -2.51
UPF3BQ9BZI7 SNORD12B-201ENST00000410433 91 ntBASIC-0.61□□□□□ -2.51
UPF3BQ9BZI7 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC-0.61□□□□□ -2.51
UPF3BQ9BZI7 SNORA31.14-201ENST00000516728 116 ntBASIC-0.61□□□□□ -2.51
UPF3BQ9BZI7 AC105029.1-201ENST00000520250 669 ntBASIC-0.61□□□□□ -2.51
UPF3BQ9BZI7 FTX_2.1-201ENST00000618816 94 ntBASIC-0.61□□□□□ -2.51
UPF3BQ9BZI7 uc_338.36-201ENST00000622331 158 ntBASIC-0.61□□□□□ -2.51
UPF3BQ9BZI7 Y_RNA.101-201ENST00000363154 102 ntBASIC-0.62□□□□□ -2.51
UPF3BQ9BZI7 RNU6-1209P-201ENST00000363655 107 ntBASIC-0.62□□□□□ -2.51
UPF3BQ9BZI7 SNORD14C-201ENST00000365382 88 ntBASIC-0.62□□□□□ -2.51
UPF3BQ9BZI7 RNU6-601P-201ENST00000384540 107 ntBASIC-0.62□□□□□ -2.51
UPF3BQ9BZI7 Y_RNA.582-201ENST00000391023 95 ntBASIC-0.62□□□□□ -2.51
UPF3BQ9BZI7 AL603910.2-201ENST00000407268 136 ntBASIC-0.62□□□□□ -2.51
UPF3BQ9BZI7 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC-0.62□□□□□ -2.51
UPF3BQ9BZI7 RNU7-67P-201ENST00000459003 62 ntBASIC-0.62□□□□□ -2.51
UPF3BQ9BZI7 Y_RNA.644-201ENST00000459006 113 ntBASIC-0.62□□□□□ -2.51
UPF3BQ9BZI7 RNU6-408P-201ENST00000515910 100 ntBASIC-0.62□□□□□ -2.51
UPF3BQ9BZI7 RNU6-1007P-201ENST00000516586 107 ntBASIC-0.62□□□□□ -2.51
UPF3BQ9BZI7 RNU6-897P-201ENST00000517135 105 ntBASIC-0.62□□□□□ -2.51
UPF3BQ9BZI7 POLR3GP1-201ENST00000594073 261 ntBASIC-0.62□□□□□ -2.51
UPF3BQ9BZI7 uc_338.28-201ENST00000612082 187 ntBASIC-0.62□□□□□ -2.51
UPF3BQ9BZI7 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.62□□□□□ -2.51
UPF3BQ9BZI7 RNU6-961P-201ENST00000363893 105 ntBASIC-0.63□□□□□ -2.51
UPF3BQ9BZI7 Y_RNA.494-201ENST00000384432 111 ntBASIC-0.63□□□□□ -2.51
UPF3BQ9BZI7 MT-TQ-201ENST00000387372 72 ntBASIC-0.63□□□□□ -2.51
UPF3BQ9BZI7 MIR501-201ENST00000390204 84 ntBASIC-0.63□□□□□ -2.51
UPF3BQ9BZI7 RNU6-913P-201ENST00000390913 95 ntBASIC-0.63□□□□□ -2.51
UPF3BQ9BZI7 SNORD72-201ENST00000390994 80 ntBASIC-0.63□□□□□ -2.51
UPF3BQ9BZI7 RNU4-83P-201ENST00000410863 133 ntBASIC-0.63□□□□□ -2.51
UPF3BQ9BZI7 USP9YP30-201ENST00000430729 455 ntBASIC-0.63□□□□□ -2.51
UPF3BQ9BZI7 RNU7-73P-201ENST00000458743 63 ntBASIC-0.63□□□□□ -2.51
UPF3BQ9BZI7 MIR2355-201ENST00000517199 87 ntBASIC-0.63□□□□□ -2.51
UPF3BQ9BZI7 MIR4639-201ENST00000584938 69 ntBASIC-0.63□□□□□ -2.51
UPF3BQ9BZI7 AC060780.3-201ENST00000589464 80 ntBASIC-0.63□□□□□ -2.51
UPF3BQ9BZI7 RNU6-1085P-201ENST00000363576 107 ntBASIC-0.64□□□□□ -2.51
UPF3BQ9BZI7 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.64□□□□□ -2.51
UPF3BQ9BZI7 RNU6-602P-201ENST00000411155 105 ntBASIC-0.64□□□□□ -2.51
UPF3BQ9BZI7 RNU6-1199P-201ENST00000411249 104 ntBASIC-0.64□□□□□ -2.51
UPF3BQ9BZI7 FCF1P9-201ENST00000412546 282 ntBASIC-0.64□□□□□ -2.51
UPF3BQ9BZI7 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC-0.64□□□□□ -2.51
UPF3BQ9BZI7 RNU6-436P-201ENST00000516171 114 ntBASIC-0.64□□□□□ -2.51
UPF3BQ9BZI7 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC-0.64□□□□□ -2.51
UPF3BQ9BZI7 MIR5188-201ENST00000583467 113 ntBASIC-0.64□□□□□ -2.51
UPF3BQ9BZI7 MIR3666-201ENST00000607845 111 ntBASIC-0.64□□□□□ -2.51
UPF3BQ9BZI7 RNU6-1301P-201ENST00000362724 104 ntBASIC-0.65□□□□□ -2.51
UPF3BQ9BZI7 MIR215-201ENST00000384858 110 ntBASIC-0.65□□□□□ -2.51
UPF3BQ9BZI7 SEPT14P3-201ENST00000439401 183 ntBASIC-0.65□□□□□ -2.51
UPF3BQ9BZI7 AL732372.2-207ENST00000445840 183 ntBASIC-0.65□□□□□ -2.51
UPF3BQ9BZI7 SEPT14P2-201ENST00000453405 183 ntBASIC-0.65□□□□□ -2.51
UPF3BQ9BZI7 SEPT14P4-201ENST00000513445 186 ntBASIC-0.65□□□□□ -2.51
UPF3BQ9BZI7 RNU6-958P-201ENST00000516995 106 ntBASIC-0.65□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms