Protein–RNA interactions for Protein: Q9BRR0

ZKSCAN3, Zinc finger protein with KRAB and SCAN domains 3, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN3Q9BRR0 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
ZKSCAN3Q9BRR0 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
ZKSCAN3Q9BRR0 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
ZKSCAN3Q9BRR0 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.85□□□□□ -1.95
ZKSCAN3Q9BRR0 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.84□□□□□ -1.95
ZKSCAN3Q9BRR0 RNU6-414P-201ENST00000363705 104 ntBASIC2.84□□□□□ -1.95
ZKSCAN3Q9BRR0 RNU1-91P-201ENST00000364746 163 ntBASIC2.84□□□□□ -1.95
ZKSCAN3Q9BRR0 Y_RNA.323-201ENST00000365157 109 ntBASIC2.84□□□□□ -1.95
ZKSCAN3Q9BRR0 RNU6-1014P-201ENST00000383940 103 ntBASIC2.84□□□□□ -1.95
ZKSCAN3Q9BRR0 RNU6-756P-201ENST00000383997 107 ntBASIC2.84□□□□□ -1.95
ZKSCAN3Q9BRR0 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.84□□□□□ -1.95
ZKSCAN3Q9BRR0 RNU7-164P-201ENST00000459221 62 ntBASIC2.84□□□□□ -1.95
ZKSCAN3Q9BRR0 AC026436.1-201ENST00000510537 270 ntBASIC2.84□□□□□ -1.95
ZKSCAN3Q9BRR0 MIR5582-201ENST00000579697 68 ntBASIC2.84□□□□□ -1.95
ZKSCAN3Q9BRR0 AC022202.1-201ENST00000613515 211 ntBASIC2.84□□□□□ -1.95
ZKSCAN3Q9BRR0 AC091932.4-201ENST00000623386 200 ntBASIC2.84□□□□□ -1.95
ZKSCAN3Q9BRR0 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.84□□□□□ -1.96
ZKSCAN3Q9BRR0 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
ZKSCAN3Q9BRR0 MIRLET7C-201ENST00000362160 84 ntBASIC2.83□□□□□ -1.96
ZKSCAN3Q9BRR0 Y_RNA.328-201ENST00000365208 113 ntBASIC2.83□□□□□ -1.96
ZKSCAN3Q9BRR0 Y_RNA.362-201ENST00000365518 110 ntBASIC2.83□□□□□ -1.96
ZKSCAN3Q9BRR0 RNU6-950P-201ENST00000384651 107 ntBASIC2.83□□□□□ -1.96
ZKSCAN3Q9BRR0 RN7SKP200-201ENST00000410564 320 ntBASIC2.83□□□□□ -1.96
ZKSCAN3Q9BRR0 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.83□□□□□ -1.96
ZKSCAN3Q9BRR0 BX510359.4-201ENST00000423750 193 ntBASIC2.83□□□□□ -1.96
ZKSCAN3Q9BRR0 RPL39P34-201ENST00000477141 156 ntBASIC2.83□□□□□ -1.96
ZKSCAN3Q9BRR0 SUMO2P16-201ENST00000519475 264 ntBASIC2.83□□□□□ -1.96
ZKSCAN3Q9BRR0 IGKV3-31-201ENST00000523109 329 ntBASIC2.83□□□□□ -1.96
ZKSCAN3Q9BRR0 ICE2P2-201ENST00000483823 2787 ntBASIC2.82□□□□□ -1.96
ZKSCAN3Q9BRR0 AP006437.1-201ENST00000641440 3685 ntBASIC2.82□□□□□ -1.96
ZKSCAN3Q9BRR0 SNORA51.5-201ENST00000384126 131 ntBASIC2.82□□□□□ -1.96
ZKSCAN3Q9BRR0 RNU6-1113P-201ENST00000384348 107 ntBASIC2.82□□□□□ -1.96
ZKSCAN3Q9BRR0 RNU1-148P-201ENST00000384472 162 ntBASIC2.82□□□□□ -1.96
ZKSCAN3Q9BRR0 AL034345.1-201ENST00000407768 123 ntBASIC2.82□□□□□ -1.96
ZKSCAN3Q9BRR0 AC234781.5-201ENST00000508429 271 ntBASIC2.82□□□□□ -1.96
ZKSCAN3Q9BRR0 RNU6-830P-201ENST00000516353 107 ntBASIC2.82□□□□□ -1.96
ZKSCAN3Q9BRR0 SNORA31.10-201ENST00000516482 106 ntBASIC2.82□□□□□ -1.96
ZKSCAN3Q9BRR0 RNA5SP281-201ENST00000516504 135 ntBASIC2.82□□□□□ -1.96
ZKSCAN3Q9BRR0 RNA5SP137-201ENST00000516833 135 ntBASIC2.82□□□□□ -1.96
ZKSCAN3Q9BRR0 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.82□□□□□ -1.96
ZKSCAN3Q9BRR0 MIR5094-201ENST00000578766 85 ntBASIC2.82□□□□□ -1.96
ZKSCAN3Q9BRR0 MIR3683-201ENST00000580847 82 ntBASIC2.82□□□□□ -1.96
ZKSCAN3Q9BRR0 AL596211.1-201ENST00000569873 2277 ntBASIC2.82□□□□□ -1.96
ZKSCAN3Q9BRR0 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
ZKSCAN3Q9BRR0 AC080100.1-201ENST00000624239 5356 ntBASIC2.81□□□□□ -1.96
ZKSCAN3Q9BRR0 MIR21-201ENST00000362134 72 ntBASIC2.81□□□□□ -1.96
ZKSCAN3Q9BRR0 RNU6-424P-201ENST00000384367 105 ntBASIC2.81□□□□□ -1.96
ZKSCAN3Q9BRR0 RNU7-26P-201ENST00000458980 63 ntBASIC2.81□□□□□ -1.96
ZKSCAN3Q9BRR0 RNU7-123P-201ENST00000515911 60 ntBASIC2.81□□□□□ -1.96
ZKSCAN3Q9BRR0 RNU6-1116P-201ENST00000517269 99 ntBASIC2.81□□□□□ -1.96
ZKSCAN3Q9BRR0 MIR4305-201ENST00000583252 102 ntBASIC2.81□□□□□ -1.96
ZKSCAN3Q9BRR0 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC2.81□□□□□ -1.96
ZKSCAN3Q9BRR0 AC002984.1-201ENST00000591692 448 ntBASIC2.81□□□□□ -1.96
ZKSCAN3Q9BRR0 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.81□□□□□ -1.96
ZKSCAN3Q9BRR0 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.81□□□□□ -1.96
ZKSCAN3Q9BRR0 SNORA25.6-201ENST00000364121 118 ntBASIC2.8□□□□□ -1.96
ZKSCAN3Q9BRR0 RNU1-51P-201ENST00000365345 176 ntBASIC2.8□□□□□ -1.96
ZKSCAN3Q9BRR0 Y_RNA.369-201ENST00000365568 117 ntBASIC2.8□□□□□ -1.96
ZKSCAN3Q9BRR0 SNORA27-201ENST00000384323 126 ntBASIC2.8□□□□□ -1.96
ZKSCAN3Q9BRR0 AL035398.1-201ENST00000430869 322 ntBASIC2.8□□□□□ -1.96
ZKSCAN3Q9BRR0 AC008413.1-201ENST00000511864 177 ntBASIC2.8□□□□□ -1.96
ZKSCAN3Q9BRR0 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.8□□□□□ -1.96
ZKSCAN3Q9BRR0 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
ZKSCAN3Q9BRR0 AC078899.2-201ENST00000595282 212 ntBASIC2.8□□□□□ -1.96
ZKSCAN3Q9BRR0 AC103810.6-201ENST00000606708 136 ntBASIC2.8□□□□□ -1.96
ZKSCAN3Q9BRR0 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.8□□□□□ -1.96
ZKSCAN3Q9BRR0 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.8□□□□□ -1.96
ZKSCAN3Q9BRR0 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
ZKSCAN3Q9BRR0 AL442644.1-201ENST00000454390 3105 ntBASIC2.79□□□□□ -1.96
ZKSCAN3Q9BRR0 SNORA38-201ENST00000363946 132 ntBASIC2.79□□□□□ -1.96
ZKSCAN3Q9BRR0 Y_RNA.241-201ENST00000364470 117 ntBASIC2.79□□□□□ -1.96
ZKSCAN3Q9BRR0 RNY4P30-201ENST00000410216 95 ntBASIC2.79□□□□□ -1.96
ZKSCAN3Q9BRR0 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.79□□□□□ -1.96
ZKSCAN3Q9BRR0 HSPE1P9-201ENST00000440046 311 ntBASIC2.79□□□□□ -1.96
ZKSCAN3Q9BRR0 RNU6-826P-201ENST00000516827 104 ntBASIC2.79□□□□□ -1.96
ZKSCAN3Q9BRR0 MIR3163-201ENST00000581592 73 ntBASIC2.79□□□□□ -1.96
ZKSCAN3Q9BRR0 MIR1291-201ENST00000627649 87 ntBASIC2.79□□□□□ -1.96
ZKSCAN3Q9BRR0 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
ZKSCAN3Q9BRR0 SNORD115-34-201ENST00000362441 82 ntBASIC2.78□□□□□ -1.96
ZKSCAN3Q9BRR0 SNORD115-12-201ENST00000362583 82 ntBASIC2.78□□□□□ -1.96
ZKSCAN3Q9BRR0 SNORD115-29-201ENST00000362834 82 ntBASIC2.78□□□□□ -1.96
ZKSCAN3Q9BRR0 SNORD115-9-201ENST00000362912 82 ntBASIC2.78□□□□□ -1.96
ZKSCAN3Q9BRR0 SNORD115-21-201ENST00000362963 81 ntBASIC2.78□□□□□ -1.96
ZKSCAN3Q9BRR0 SNORD115-14-201ENST00000363090 81 ntBASIC2.78□□□□□ -1.96
ZKSCAN3Q9BRR0 SNORD115-13-201ENST00000363358 82 ntBASIC2.78□□□□□ -1.96
ZKSCAN3Q9BRR0 RNU6-833P-201ENST00000363486 107 ntBASIC2.78□□□□□ -1.96
ZKSCAN3Q9BRR0 SNORD115-41-201ENST00000363608 82 ntBASIC2.78□□□□□ -1.96
ZKSCAN3Q9BRR0 SNORD115-11-201ENST00000363616 82 ntBASIC2.78□□□□□ -1.96
ZKSCAN3Q9BRR0 SNORD115-5-201ENST00000363633 82 ntBASIC2.78□□□□□ -1.96
ZKSCAN3Q9BRR0 SNORD115-39-201ENST00000363694 82 ntBASIC2.78□□□□□ -1.96
ZKSCAN3Q9BRR0 SNORD115-4-201ENST00000363810 82 ntBASIC2.78□□□□□ -1.96
ZKSCAN3Q9BRR0 SNORD115-16-201ENST00000363887 82 ntBASIC2.78□□□□□ -1.96
ZKSCAN3Q9BRR0 SNORD115-6-201ENST00000363942 82 ntBASIC2.78□□□□□ -1.96
ZKSCAN3Q9BRR0 SNORD115-42-201ENST00000364273 82 ntBASIC2.78□□□□□ -1.96
ZKSCAN3Q9BRR0 SNORA63D-201ENST00000364359 132 ntBASIC2.78□□□□□ -1.96
ZKSCAN3Q9BRR0 SNORD115-15-201ENST00000364809 81 ntBASIC2.78□□□□□ -1.96
ZKSCAN3Q9BRR0 SNORD115-1-201ENST00000364961 82 ntBASIC2.78□□□□□ -1.96
ZKSCAN3Q9BRR0 SNORD115-26-201ENST00000365067 82 ntBASIC2.78□□□□□ -1.96
ZKSCAN3Q9BRR0 SNORD115-10-201ENST00000365073 81 ntBASIC2.78□□□□□ -1.96
ZKSCAN3Q9BRR0 SNORD115-43-201ENST00000365503 82 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 193.2 ms