Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 RNU6-199P-201ENST00000362954 107 ntBASIC1.88□□□□□ -2.11
VRK1Q99986 Y_RNA.170-201ENST00000363746 110 ntBASIC1.88□□□□□ -2.11
VRK1Q99986 RNY1P5-201ENST00000383890 115 ntBASIC1.88□□□□□ -2.11
VRK1Q99986 Y_RNA.398-201ENST00000383952 99 ntBASIC1.88□□□□□ -2.11
VRK1Q99986 RNU6-768P-201ENST00000384683 107 ntBASIC1.88□□□□□ -2.11
VRK1Q99986 RNA5SP338-201ENST00000410495 85 ntBASIC1.88□□□□□ -2.11
VRK1Q99986 UBL5P3-201ENST00000475112 231 ntBASIC1.88□□□□□ -2.11
VRK1Q99986 RNU7-200P-201ENST00000516105 62 ntBASIC1.88□□□□□ -2.11
VRK1Q99986 AC007751.1-201ENST00000529260 376 ntBASIC1.88□□□□□ -2.11
VRK1Q99986 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
VRK1Q99986 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
VRK1Q99986 Y_RNA.8-201ENST00000362353 102 ntBASIC1.87□□□□□ -2.11
VRK1Q99986 SNORA25.7-201ENST00000364375 127 ntBASIC1.87□□□□□ -2.11
VRK1Q99986 RNU6-1130P-201ENST00000365434 107 ntBASIC1.87□□□□□ -2.11
VRK1Q99986 SNORD116-18-201ENST00000383961 92 ntBASIC1.87□□□□□ -2.11
VRK1Q99986 Y_RNA.547-201ENST00000384654 119 ntBASIC1.87□□□□□ -2.11
VRK1Q99986 MIR518F-201ENST00000384973 87 ntBASIC1.87□□□□□ -2.11
VRK1Q99986 MIR30A-201ENST00000385092 71 ntBASIC1.87□□□□□ -2.11
VRK1Q99986 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.87□□□□□ -2.11
VRK1Q99986 snoU13.15-201ENST00000459407 104 ntBASIC1.87□□□□□ -2.11
VRK1Q99986 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.87□□□□□ -2.11
VRK1Q99986 RNU7-25P-201ENST00000516544 62 ntBASIC1.87□□□□□ -2.11
VRK1Q99986 SUMO2P16-201ENST00000519475 264 ntBASIC1.87□□□□□ -2.11
VRK1Q99986 AC015688.6-201ENST00000577737 104 ntBASIC1.87□□□□□ -2.11
VRK1Q99986 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.87□□□□□ -2.11
VRK1Q99986 Y_RNA.778-201ENST00000620203 90 ntBASIC1.87□□□□□ -2.11
VRK1Q99986 AC009831.4-201ENST00000620744 325 ntBASIC1.87□□□□□ -2.11
VRK1Q99986 MIR7843-201ENST00000622274 79 ntBASIC1.87□□□□□ -2.11
VRK1Q99986 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.86□□□□□ -2.11
VRK1Q99986 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
VRK1Q99986 SNORA64-201ENST00000384674 134 ntBASIC1.86□□□□□ -2.11
VRK1Q99986 MIR504-201ENST00000385065 83 ntBASIC1.86□□□□□ -2.11
VRK1Q99986 MIR513A1-201ENST00000385138 129 ntBASIC1.86□□□□□ -2.11
VRK1Q99986 MIR136-201ENST00000385207 82 ntBASIC1.86□□□□□ -2.11
VRK1Q99986 SNORA75.5-201ENST00000391291 81 ntBASIC1.86□□□□□ -2.11
VRK1Q99986 AL021397.1-201ENST00000451806 248 ntBASIC1.86□□□□□ -2.11
VRK1Q99986 RPL23AP42-201ENST00000471152 471 ntBASIC1.86□□□□□ -2.11
VRK1Q99986 RNU6-1270P-201ENST00000517128 108 ntBASIC1.86□□□□□ -2.11
VRK1Q99986 MTND5P41-201ENST00000517498 206 ntBASIC1.86□□□□□ -2.11
VRK1Q99986 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
VRK1Q99986 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.86□□□□□ -2.11
VRK1Q99986 MIR6844-201ENST00000637122 62 ntBASIC1.86□□□□□ -2.11
VRK1Q99986 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.86□□□□□ -2.11
VRK1Q99986 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.85□□□□□ -2.11
VRK1Q99986 SNORD115-28-201ENST00000363931 81 ntBASIC1.85□□□□□ -2.11
VRK1Q99986 RNU6-457P-201ENST00000363999 107 ntBASIC1.85□□□□□ -2.11
VRK1Q99986 SNORA2.2-201ENST00000365473 135 ntBASIC1.85□□□□□ -2.11
VRK1Q99986 RNU6-1292P-201ENST00000383856 107 ntBASIC1.85□□□□□ -2.11
VRK1Q99986 RNU6-746P-201ENST00000384112 109 ntBASIC1.85□□□□□ -2.11
VRK1Q99986 SNORA67.3-201ENST00000384366 140 ntBASIC1.85□□□□□ -2.11
VRK1Q99986 MIR526A1-201ENST00000384897 85 ntBASIC1.85□□□□□ -2.11
VRK1Q99986 MIR653-201ENST00000385279 96 ntBASIC1.85□□□□□ -2.11
VRK1Q99986 HMGN2P23-201ENST00000456759 269 ntBASIC1.85□□□□□ -2.11
VRK1Q99986 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.85□□□□□ -2.11
VRK1Q99986 DEFB122-202ENST00000569013 197 ntBASIC1.85□□□□□ -2.11
VRK1Q99986 AC134878.1-201ENST00000619901 243 ntBASIC1.85□□□□□ -2.11
VRK1Q99986 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.85□□□□□ -2.11
VRK1Q99986 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
VRK1Q99986 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.84□□□□□ -2.11
VRK1Q99986 RNU6-151P-201ENST00000364158 107 ntBASIC1.84□□□□□ -2.11
VRK1Q99986 Y_RNA.400-201ENST00000383963 111 ntBASIC1.84□□□□□ -2.11
VRK1Q99986 Y_RNA.410-201ENST00000383992 113 ntBASIC1.84□□□□□ -2.11
VRK1Q99986 Y_RNA.506-201ENST00000384494 102 ntBASIC1.84□□□□□ -2.11
VRK1Q99986 HMGN2P19-201ENST00000425149 265 ntBASIC1.84□□□□□ -2.11
VRK1Q99986 AC087499.4-201ENST00000448505 178 ntBASIC1.84□□□□□ -2.11
VRK1Q99986 RNU4-57P-201ENST00000515980 135 ntBASIC1.84□□□□□ -2.11
VRK1Q99986 RNA5SP200-201ENST00000516360 103 ntBASIC1.84□□□□□ -2.11
VRK1Q99986 MIR3198-2-201ENST00000577868 80 ntBASIC1.84□□□□□ -2.11
VRK1Q99986 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.84□□□□□ -2.11
VRK1Q99986 AC012493.3-201ENST00000604494 112 ntBASIC1.84□□□□□ -2.11
VRK1Q99986 MIR219B-201ENST00000637023 88 ntBASIC1.84□□□□□ -2.11
VRK1Q99986 RNA5SP259-201ENST00000365541 109 ntBASIC1.83□□□□□ -2.12
VRK1Q99986 SNORA1-201ENST00000384107 130 ntBASIC1.83□□□□□ -2.12
VRK1Q99986 MIR624-201ENST00000385217 97 ntBASIC1.83□□□□□ -2.12
VRK1Q99986 snoU13.9-201ENST00000458927 103 ntBASIC1.83□□□□□ -2.12
VRK1Q99986 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.83□□□□□ -2.12
VRK1Q99986 AC090049.2-201ENST00000550377 109 ntBASIC1.83□□□□□ -2.12
VRK1Q99986 AC015726.2-201ENST00000620112 122 ntBASIC1.83□□□□□ -2.12
VRK1Q99986 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.83□□□□□ -2.12
VRK1Q99986 MIR3658-201ENST00000636291 56 ntBASIC1.83□□□□□ -2.12
VRK1Q99986 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
VRK1Q99986 MIR302D-201ENST00000362275 68 ntBASIC1.82□□□□□ -2.12
VRK1Q99986 SNORD114-1-201ENST00000362705 72 ntBASIC1.82□□□□□ -2.12
VRK1Q99986 RNA5SP160-201ENST00000364866 120 ntBASIC1.82□□□□□ -2.12
VRK1Q99986 MIR516B2-201ENST00000385190 85 ntBASIC1.82□□□□□ -2.12
VRK1Q99986 AL023284.1-201ENST00000403956 276 ntBASIC1.82□□□□□ -2.12
VRK1Q99986 AL603908.1-201ENST00000406098 201 ntBASIC1.82□□□□□ -2.12
VRK1Q99986 RNA5SP127-201ENST00000411051 133 ntBASIC1.82□□□□□ -2.12
VRK1Q99986 AL445646.1-201ENST00000431784 216 ntBASIC1.82□□□□□ -2.12
VRK1Q99986 AF228730.3-201ENST00000436691 102 ntBASIC1.82□□□□□ -2.12
VRK1Q99986 RNU6-917P-201ENST00000516294 104 ntBASIC1.82□□□□□ -2.12
VRK1Q99986 MIR3129-201ENST00000581095 76 ntBASIC1.82□□□□□ -2.12
VRK1Q99986 MIR3935-201ENST00000583472 104 ntBASIC1.82□□□□□ -2.12
VRK1Q99986 ICE2P2-201ENST00000483823 2787 ntBASIC1.82□□□□□ -2.12
VRK1Q99986 Y_RNA.37-201ENST00000362606 108 ntBASIC1.81□□□□□ -2.12
VRK1Q99986 RNU6-1082P-201ENST00000364574 107 ntBASIC1.81□□□□□ -2.12
VRK1Q99986 RNU6-125P-201ENST00000384505 107 ntBASIC1.81□□□□□ -2.12
VRK1Q99986 SNORD37.2-201ENST00000391075 66 ntBASIC1.81□□□□□ -2.12
VRK1Q99986 SNORD77.3-201ENST00000391113 65 ntBASIC1.81□□□□□ -2.12
VRK1Q99986 MIR548M-201ENST00000408260 86 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 127.2 ms