Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 AL451046.2-201ENST00000403074 277 ntBASIC1.26□□□□□ -2.21
RAD9AQ99638 MIR1298-201ENST00000408783 112 ntBASIC1.26□□□□□ -2.21
RAD9AQ99638 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.26□□□□□ -2.21
RAD9AQ99638 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC1.26□□□□□ -2.21
RAD9AQ99638 RPS29P29-201ENST00000456396 171 ntBASIC1.26□□□□□ -2.21
RAD9AQ99638 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.26□□□□□ -2.21
RAD9AQ99638 CYP3A52P-201ENST00000563326 91 ntBASIC1.26□□□□□ -2.21
RAD9AQ99638 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
RAD9AQ99638 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.26□□□□□ -2.21
RAD9AQ99638 Y_RNA.133-201ENST00000363428 110 ntBASIC1.25□□□□□ -2.21
RAD9AQ99638 Y_RNA.293-201ENST00000364908 93 ntBASIC1.25□□□□□ -2.21
RAD9AQ99638 Y_RNA.396-201ENST00000383949 103 ntBASIC1.25□□□□□ -2.21
RAD9AQ99638 RNU6-1289P-201ENST00000384431 106 ntBASIC1.25□□□□□ -2.21
RAD9AQ99638 SNORD41-201ENST00000386967 70 ntBASIC1.25□□□□□ -2.21
RAD9AQ99638 HMGN2P32-201ENST00000444648 269 ntBASIC1.25□□□□□ -2.21
RAD9AQ99638 RPS23P4-201ENST00000487908 423 ntBASIC1.25□□□□□ -2.21
RAD9AQ99638 NDUFA4P2-201ENST00000489989 244 ntBASIC1.25□□□□□ -2.21
RAD9AQ99638 MTCO2P24-201ENST00000515611 426 ntBASIC1.25□□□□□ -2.21
RAD9AQ99638 RN7SKP88-201ENST00000516847 250 ntBASIC1.25□□□□□ -2.21
RAD9AQ99638 AC087685.1-201ENST00000587507 141 ntBASIC1.25□□□□□ -2.21
RAD9AQ99638 7SK.8-201ENST00000612110 250 ntBASIC1.25□□□□□ -2.21
RAD9AQ99638 7SK.11-201ENST00000615477 250 ntBASIC1.25□□□□□ -2.21
RAD9AQ99638 U2.14-201ENST00000615943 113 ntBASIC1.25□□□□□ -2.21
RAD9AQ99638 MIR8065-201ENST00000620577 100 ntBASIC1.25□□□□□ -2.21
RAD9AQ99638 7SK.13-201ENST00000622040 250 ntBASIC1.25□□□□□ -2.21
RAD9AQ99638 AC068700.1-201ENST00000565862 3754 ntBASIC1.25□□□□□ -2.21
RAD9AQ99638 Y_RNA.117-201ENST00000363294 101 ntBASIC1.24□□□□□ -2.21
RAD9AQ99638 SNORD14E-201ENST00000364009 85 ntBASIC1.24□□□□□ -2.21
RAD9AQ99638 RNU6-383P-201ENST00000410864 94 ntBASIC1.24□□□□□ -2.21
RAD9AQ99638 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.24□□□□□ -2.21
RAD9AQ99638 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.24□□□□□ -2.21
RAD9AQ99638 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.24□□□□□ -2.21
RAD9AQ99638 AL357312.1-201ENST00000603879 298 ntBASIC1.24□□□□□ -2.21
RAD9AQ99638 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.24□□□□□ -2.21
RAD9AQ99638 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
RAD9AQ99638 MIR367-201ENST00000362299 68 ntBASIC1.23□□□□□ -2.21
RAD9AQ99638 RNA5SP325-201ENST00000363756 130 ntBASIC1.23□□□□□ -2.21
RAD9AQ99638 RNU6-740P-201ENST00000364734 105 ntBASIC1.23□□□□□ -2.21
RAD9AQ99638 Y_RNA.336-201ENST00000365307 109 ntBASIC1.23□□□□□ -2.21
RAD9AQ99638 RNU6-211P-201ENST00000384047 107 ntBASIC1.23□□□□□ -2.21
RAD9AQ99638 Y_RNA.518-201ENST00000384552 113 ntBASIC1.23□□□□□ -2.21
RAD9AQ99638 MIR516B2-201ENST00000385190 85 ntBASIC1.23□□□□□ -2.21
RAD9AQ99638 MIR618-201ENST00000385287 98 ntBASIC1.23□□□□□ -2.21
RAD9AQ99638 MTCYBP9-201ENST00000431021 303 ntBASIC1.23□□□□□ -2.21
RAD9AQ99638 AL118496.2-201ENST00000448300 230 ntBASIC1.23□□□□□ -2.21
RAD9AQ99638 SNORD11-201ENST00000459124 84 ntBASIC1.23□□□□□ -2.21
RAD9AQ99638 RNU7-40P-201ENST00000516397 64 ntBASIC1.23□□□□□ -2.21
RAD9AQ99638 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.23□□□□□ -2.21
RAD9AQ99638 MIR4724-201ENST00000579485 89 ntBASIC1.23□□□□□ -2.21
RAD9AQ99638 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.23□□□□□ -2.21
RAD9AQ99638 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.23□□□□□ -2.21
RAD9AQ99638 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
RAD9AQ99638 Y_RNA.14-201ENST00000362415 103 ntBASIC1.22□□□□□ -2.21
RAD9AQ99638 MIR136-201ENST00000385207 82 ntBASIC1.22□□□□□ -2.21
RAD9AQ99638 MIR802-201ENST00000390235 94 ntBASIC1.22□□□□□ -2.21
RAD9AQ99638 RNU6-1007P-201ENST00000516586 107 ntBASIC1.22□□□□□ -2.21
RAD9AQ99638 RNU6-165P-201ENST00000517170 99 ntBASIC1.22□□□□□ -2.21
RAD9AQ99638 AC090142.3-201ENST00000519012 385 ntBASIC1.22□□□□□ -2.21
RAD9AQ99638 AC008507.4-201ENST00000585464 127 ntBASIC1.22□□□□□ -2.21
RAD9AQ99638 RNU6-442P-201ENST00000383968 104 ntBASIC1.21□□□□□ -2.22
RAD9AQ99638 MIR568-201ENST00000385036 95 ntBASIC1.21□□□□□ -2.22
RAD9AQ99638 MIR1302-3-201ENST00000408128 138 ntBASIC1.21□□□□□ -2.22
RAD9AQ99638 AC023449.1-201ENST00000454464 154 ntBASIC1.21□□□□□ -2.22
RAD9AQ99638 RNU6-947P-201ENST00000516264 106 ntBASIC1.21□□□□□ -2.22
RAD9AQ99638 AC012433.1-201ENST00000588916 398 ntBASIC1.21□□□□□ -2.22
RAD9AQ99638 RNA5SP327-201ENST00000362494 101 ntBASIC1.2□□□□□ -2.22
RAD9AQ99638 RNU4-10P-201ENST00000364383 140 ntBASIC1.2□□□□□ -2.22
RAD9AQ99638 Y_RNA.288-201ENST00000364854 92 ntBASIC1.2□□□□□ -2.22
RAD9AQ99638 MIR526A2-201ENST00000390198 65 ntBASIC1.2□□□□□ -2.22
RAD9AQ99638 SNORD72-201ENST00000390994 80 ntBASIC1.2□□□□□ -2.22
RAD9AQ99638 RNA5SP496-201ENST00000391240 109 ntBASIC1.2□□□□□ -2.22
RAD9AQ99638 RNU6-651P-201ENST00000411040 105 ntBASIC1.2□□□□□ -2.22
RAD9AQ99638 Y_RNA.802-201ENST00000614892 130 ntBASIC1.2□□□□□ -2.22
RAD9AQ99638 Y_RNA.82-201ENST00000363000 102 ntBASIC1.19□□□□□ -2.22
RAD9AQ99638 Y_RNA.92-201ENST00000363043 102 ntBASIC1.19□□□□□ -2.22
RAD9AQ99638 Y_RNA.235-201ENST00000364412 102 ntBASIC1.19□□□□□ -2.22
RAD9AQ99638 Y_RNA.306-201ENST00000365015 102 ntBASIC1.19□□□□□ -2.22
RAD9AQ99638 Y_RNA.312-201ENST00000365089 102 ntBASIC1.19□□□□□ -2.22
RAD9AQ99638 Y_RNA.322-201ENST00000365151 102 ntBASIC1.19□□□□□ -2.22
RAD9AQ99638 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.19□□□□□ -2.22
RAD9AQ99638 Y_RNA.590-201ENST00000410140 107 ntBASIC1.19□□□□□ -2.22
RAD9AQ99638 RNU2-38P-201ENST00000410856 79 ntBASIC1.19□□□□□ -2.22
RAD9AQ99638 RPL39P39-201ENST00000455840 151 ntBASIC1.19□□□□□ -2.22
RAD9AQ99638 SNORD2.1-201ENST00000458762 69 ntBASIC1.19□□□□□ -2.22
RAD9AQ99638 SNORD127-201ENST00000458892 86 ntBASIC1.19□□□□□ -2.22
RAD9AQ99638 Y_RNA.650-201ENST00000459002 102 ntBASIC1.19□□□□□ -2.22
RAD9AQ99638 Y_RNA.777-201ENST00000516982 102 ntBASIC1.19□□□□□ -2.22
RAD9AQ99638 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.19□□□□□ -2.22
RAD9AQ99638 Y_RNA.771-201ENST00000598668 102 ntBASIC1.19□□□□□ -2.22
RAD9AQ99638 AC006006.1-201ENST00000603082 144 ntBASIC1.19□□□□□ -2.22
RAD9AQ99638 AL021707.8-201ENST00000609428 183 ntBASIC1.19□□□□□ -2.22
RAD9AQ99638 Y_RNA.789-201ENST00000622480 102 ntBASIC1.19□□□□□ -2.22
RAD9AQ99638 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.18□□□□□ -2.22
RAD9AQ99638 Y_RNA.24-201ENST00000362508 103 ntBASIC1.18□□□□□ -2.22
RAD9AQ99638 Y_RNA.242-201ENST00000364473 110 ntBASIC1.18□□□□□ -2.22
RAD9AQ99638 Y_RNA.352-201ENST00000365439 102 ntBASIC1.18□□□□□ -2.22
RAD9AQ99638 SNORD38C-201ENST00000384381 69 ntBASIC1.18□□□□□ -2.22
RAD9AQ99638 Y_RNA.556-201ENST00000384677 113 ntBASIC1.18□□□□□ -2.22
RAD9AQ99638 SNORA8.3-201ENST00000384679 139 ntBASIC1.18□□□□□ -2.22
RAD9AQ99638 MIR15B-201ENST00000385045 98 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms