Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 MIR4724-201ENST00000579485 89 ntBASIC1.53□□□□□ -2.16
SIN3AQ96ST3 MIR4422-201ENST00000581938 83 ntBASIC1.53□□□□□ -2.16
SIN3AQ96ST3 AL365434.2-201ENST00000607979 234 ntBASIC1.53□□□□□ -2.16
SIN3AQ96ST3 AL365265.1-201ENST00000621045 234 ntBASIC1.53□□□□□ -2.16
SIN3AQ96ST3 AL161722.3-201ENST00000605789 2983 ntBASIC1.52□□□□□ -2.17
SIN3AQ96ST3 RNU6-199P-201ENST00000362954 107 ntBASIC1.52□□□□□ -2.17
SIN3AQ96ST3 RNU6-653P-201ENST00000363074 106 ntBASIC1.52□□□□□ -2.17
SIN3AQ96ST3 Y_RNA.292-201ENST00000364904 97 ntBASIC1.52□□□□□ -2.17
SIN3AQ96ST3 SNORA8.3-201ENST00000384679 139 ntBASIC1.52□□□□□ -2.17
SIN3AQ96ST3 MIR626-201ENST00000385032 94 ntBASIC1.52□□□□□ -2.17
SIN3AQ96ST3 AC027119.1-201ENST00000440877 241 ntBASIC1.52□□□□□ -2.17
SIN3AQ96ST3 RNU6-917P-201ENST00000516294 104 ntBASIC1.52□□□□□ -2.17
SIN3AQ96ST3 AC019176.1-201ENST00000518519 225 ntBASIC1.52□□□□□ -2.17
SIN3AQ96ST3 MIR5688-201ENST00000580619 83 ntBASIC1.52□□□□□ -2.17
SIN3AQ96ST3 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.52□□□□□ -2.17
SIN3AQ96ST3 MIR4295-201ENST00000585286 85 ntBASIC1.52□□□□□ -2.17
SIN3AQ96ST3 AC008507.4-201ENST00000585464 127 ntBASIC1.52□□□□□ -2.17
SIN3AQ96ST3 AC006006.1-201ENST00000603082 144 ntBASIC1.52□□□□□ -2.17
SIN3AQ96ST3 RNU6-1084P-201ENST00000362498 107 ntBASIC1.51□□□□□ -2.17
SIN3AQ96ST3 Y_RNA.24-201ENST00000362508 103 ntBASIC1.51□□□□□ -2.17
SIN3AQ96ST3 MIR526A1-201ENST00000384897 85 ntBASIC1.51□□□□□ -2.17
SIN3AQ96ST3 MIR150-201ENST00000385048 84 ntBASIC1.51□□□□□ -2.17
SIN3AQ96ST3 RNU1-78P-201ENST00000391248 165 ntBASIC1.51□□□□□ -2.17
SIN3AQ96ST3 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.51□□□□□ -2.17
SIN3AQ96ST3 Y_RNA.714-201ENST00000517065 90 ntBASIC1.51□□□□□ -2.17
SIN3AQ96ST3 RNU6-111P-201ENST00000517179 105 ntBASIC1.51□□□□□ -2.17
SIN3AQ96ST3 AC087685.1-201ENST00000587507 141 ntBASIC1.51□□□□□ -2.17
SIN3AQ96ST3 Y_RNA.65-201ENST00000362846 100 ntBASIC1.5□□□□□ -2.17
SIN3AQ96ST3 snoU2-30.1-201ENST00000365012 70 ntBASIC1.5□□□□□ -2.17
SIN3AQ96ST3 RNY4P28-201ENST00000365281 93 ntBASIC1.5□□□□□ -2.17
SIN3AQ96ST3 RNA5SP496-201ENST00000391240 109 ntBASIC1.5□□□□□ -2.17
SIN3AQ96ST3 RPS27P16-201ENST00000425758 201 ntBASIC1.5□□□□□ -2.17
SIN3AQ96ST3 AC245517.4-201ENST00000448601 281 ntBASIC1.5□□□□□ -2.17
SIN3AQ96ST3 AC245047.8-201ENST00000456455 284 ntBASIC1.5□□□□□ -2.17
SIN3AQ96ST3 AC079140.2-201ENST00000506193 142 ntBASIC1.5□□□□□ -2.17
SIN3AQ96ST3 RN7SKP179-201ENST00000516126 217 ntBASIC1.5□□□□□ -2.17
SIN3AQ96ST3 AL049861.1-201ENST00000603130 150 ntBASIC1.5□□□□□ -2.17
SIN3AQ96ST3 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
SIN3AQ96ST3 SNORD33-201ENST00000362761 85 ntBASIC1.49□□□□□ -2.17
SIN3AQ96ST3 snoU2_19.4-201ENST00000364329 80 ntBASIC1.49□□□□□ -2.17
SIN3AQ96ST3 Y_RNA.226-201ENST00000364337 114 ntBASIC1.49□□□□□ -2.17
SIN3AQ96ST3 Y_RNA.229-201ENST00000364347 113 ntBASIC1.49□□□□□ -2.17
SIN3AQ96ST3 SNORA20.1-201ENST00000364790 130 ntBASIC1.49□□□□□ -2.17
SIN3AQ96ST3 Y_RNA.401-201ENST00000383965 117 ntBASIC1.49□□□□□ -2.17
SIN3AQ96ST3 MIR653-201ENST00000385279 96 ntBASIC1.49□□□□□ -2.17
SIN3AQ96ST3 SNORD72-201ENST00000390994 80 ntBASIC1.49□□□□□ -2.17
SIN3AQ96ST3 MIR1298-201ENST00000408783 112 ntBASIC1.49□□□□□ -2.17
SIN3AQ96ST3 SNRPGP14-201ENST00000435400 219 ntBASIC1.49□□□□□ -2.17
SIN3AQ96ST3 uc_338.4-201ENST00000616635 176 ntBASIC1.49□□□□□ -2.17
SIN3AQ96ST3 RNY1P10-201ENST00000363268 113 ntBASIC1.48□□□□□ -2.17
SIN3AQ96ST3 RNY1-201ENST00000364228 113 ntBASIC1.48□□□□□ -2.17
SIN3AQ96ST3 RNU6-955P-201ENST00000410497 104 ntBASIC1.48□□□□□ -2.17
SIN3AQ96ST3 AC087343.1-201ENST00000477341 475 ntBASIC1.48□□□□□ -2.17
SIN3AQ96ST3 RNA5SP445-201ENST00000515889 115 ntBASIC1.48□□□□□ -2.17
SIN3AQ96ST3 AL160236.1-201ENST00000556317 195 ntBASIC1.48□□□□□ -2.17
SIN3AQ96ST3 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.48□□□□□ -2.17
SIN3AQ96ST3 Y_RNA.188-201ENST00000363952 111 ntBASIC1.47□□□□□ -2.17
SIN3AQ96ST3 SNORD14E-201ENST00000364009 85 ntBASIC1.47□□□□□ -2.17
SIN3AQ96ST3 RNU4-38P-201ENST00000364472 129 ntBASIC1.47□□□□□ -2.17
SIN3AQ96ST3 Y_RNA.262-201ENST00000364641 102 ntBASIC1.47□□□□□ -2.17
SIN3AQ96ST3 Y_RNA.336-201ENST00000365307 109 ntBASIC1.47□□□□□ -2.17
SIN3AQ96ST3 SNORD41-201ENST00000386967 70 ntBASIC1.47□□□□□ -2.17
SIN3AQ96ST3 MT-TG-201ENST00000387429 68 ntBASIC1.47□□□□□ -2.17
SIN3AQ96ST3 RNU6-381P-201ENST00000391259 108 ntBASIC1.47□□□□□ -2.17
SIN3AQ96ST3 Y_RNA.618-201ENST00000410949 107 ntBASIC1.47□□□□□ -2.17
SIN3AQ96ST3 Y_RNA.626-201ENST00000411288 95 ntBASIC1.47□□□□□ -2.17
SIN3AQ96ST3 HMGN2P32-201ENST00000444648 269 ntBASIC1.47□□□□□ -2.17
SIN3AQ96ST3 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.47□□□□□ -2.17
SIN3AQ96ST3 SCARNA8-201ENST00000515924 131 ntBASIC1.47□□□□□ -2.17
SIN3AQ96ST3 RNY3P16-201ENST00000516338 101 ntBASIC1.47□□□□□ -2.17
SIN3AQ96ST3 RNU7-149P-201ENST00000516739 59 ntBASIC1.47□□□□□ -2.17
SIN3AQ96ST3 RNA5SP102-201ENST00000516865 106 ntBASIC1.47□□□□□ -2.17
SIN3AQ96ST3 AC090142.3-201ENST00000519012 385 ntBASIC1.47□□□□□ -2.17
SIN3AQ96ST3 MIR3937-201ENST00000580135 106 ntBASIC1.47□□□□□ -2.17
SIN3AQ96ST3 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.47□□□□□ -2.17
SIN3AQ96ST3 AL442644.1-201ENST00000454390 3105 ntBASIC1.46□□□□□ -2.17
SIN3AQ96ST3 SNORA2.2-201ENST00000365473 135 ntBASIC1.46□□□□□ -2.18
SIN3AQ96ST3 MIR452-201ENST00000385020 85 ntBASIC1.46□□□□□ -2.18
SIN3AQ96ST3 SNX2P2-201ENST00000424553 323 ntBASIC1.46□□□□□ -2.18
SIN3AQ96ST3 SNORD77.4-201ENST00000516158 81 ntBASIC1.46□□□□□ -2.18
SIN3AQ96ST3 RNU4-71P-201ENST00000516258 113 ntBASIC1.46□□□□□ -2.18
SIN3AQ96ST3 RNU6-1271P-201ENST00000517049 105 ntBASIC1.46□□□□□ -2.18
SIN3AQ96ST3 AC090049.2-201ENST00000550377 109 ntBASIC1.46□□□□□ -2.18
SIN3AQ96ST3 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.46□□□□□ -2.18
SIN3AQ96ST3 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
SIN3AQ96ST3 MIR337-201ENST00000362281 93 ntBASIC1.45□□□□□ -2.18
SIN3AQ96ST3 RNU6-379P-201ENST00000363813 104 ntBASIC1.45□□□□□ -2.18
SIN3AQ96ST3 RNU6-268P-201ENST00000364174 107 ntBASIC1.45□□□□□ -2.18
SIN3AQ96ST3 RNU6-1138P-201ENST00000365359 106 ntBASIC1.45□□□□□ -2.18
SIN3AQ96ST3 RNU4-17P-201ENST00000365598 141 ntBASIC1.45□□□□□ -2.18
SIN3AQ96ST3 RNU6-442P-201ENST00000383968 104 ntBASIC1.45□□□□□ -2.18
SIN3AQ96ST3 Y_RNA.489-201ENST00000384410 101 ntBASIC1.45□□□□□ -2.18
SIN3AQ96ST3 MIR516B2-201ENST00000385190 85 ntBASIC1.45□□□□□ -2.18
SIN3AQ96ST3 MT-TT-201ENST00000387460 66 ntBASIC1.45□□□□□ -2.18
SIN3AQ96ST3 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.45□□□□□ -2.18
SIN3AQ96ST3 RNU6-922P-201ENST00000516753 99 ntBASIC1.45□□□□□ -2.18
SIN3AQ96ST3 RNU6-453P-201ENST00000516819 85 ntBASIC1.45□□□□□ -2.18
SIN3AQ96ST3 RNU6-902P-201ENST00000517212 91 ntBASIC1.45□□□□□ -2.18
SIN3AQ96ST3 AL513534.2-201ENST00000603836 250 ntBASIC1.45□□□□□ -2.18
SIN3AQ96ST3 MIR616-201ENST00000385293 97 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms