Protein–RNA interactions for Protein: Q96QK1

VPS35, Vacuolar protein sorting-associated protein 35, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35Q96QK1 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.5□□□□□ -2.33
VPS35Q96QK1 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.5□□□□□ -2.33
VPS35Q96QK1 RNU6-801P-201ENST00000364087 105 ntBASIC0.49□□□□□ -2.33
VPS35Q96QK1 Y_RNA.355-201ENST00000365462 98 ntBASIC0.49□□□□□ -2.33
VPS35Q96QK1 Y_RNA.376-201ENST00000365638 108 ntBASIC0.49□□□□□ -2.33
VPS35Q96QK1 SNORA36.2-201ENST00000384004 127 ntBASIC0.49□□□□□ -2.33
VPS35Q96QK1 SNORA26.5-201ENST00000391215 123 ntBASIC0.49□□□□□ -2.33
VPS35Q96QK1 RNU6-847P-201ENST00000411115 108 ntBASIC0.49□□□□□ -2.33
VPS35Q96QK1 AC236972.2-201ENST00000434979 310 ntBASIC0.49□□□□□ -2.33
VPS35Q96QK1 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.49□□□□□ -2.33
VPS35Q96QK1 SEPT14P8-201ENST00000508026 178 ntBASIC0.49□□□□□ -2.33
VPS35Q96QK1 SNORD113-5-201ENST00000607261 78 ntBASIC0.49□□□□□ -2.33
VPS35Q96QK1 PART1_1.1-201ENST00000611761 217 ntBASIC0.49□□□□□ -2.33
VPS35Q96QK1 RNU6-369P-201ENST00000362515 102 ntBASIC0.48□□□□□ -2.33
VPS35Q96QK1 SNORD45.3-201ENST00000363836 72 ntBASIC0.48□□□□□ -2.33
VPS35Q96QK1 Y_RNA.813-201ENST00000364639 102 ntBASIC0.48□□□□□ -2.33
VPS35Q96QK1 Y_RNA.269-201ENST00000364685 89 ntBASIC0.48□□□□□ -2.33
VPS35Q96QK1 Y_RNA.508-201ENST00000384502 114 ntBASIC0.48□□□□□ -2.33
VPS35Q96QK1 Y_RNA.529-201ENST00000384586 119 ntBASIC0.48□□□□□ -2.33
VPS35Q96QK1 RNU6-130P-201ENST00000411112 103 ntBASIC0.48□□□□□ -2.33
VPS35Q96QK1 AC040926.1-201ENST00000530195 238 ntBASIC0.48□□□□□ -2.33
VPS35Q96QK1 AP000753.3-201ENST00000604083 169 ntBASIC0.48□□□□□ -2.33
VPS35Q96QK1 AC243994.1-201ENST00000618627 109 ntBASIC0.48□□□□□ -2.33
VPS35Q96QK1 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.48□□□□□ -2.33
VPS35Q96QK1 Y_RNA.303-201ENST00000364998 94 ntBASIC0.47□□□□□ -2.33
VPS35Q96QK1 Y_RNA.356-201ENST00000365475 113 ntBASIC0.47□□□□□ -2.33
VPS35Q96QK1 RNY1P8-201ENST00000383970 114 ntBASIC0.47□□□□□ -2.33
VPS35Q96QK1 RNU6-1237P-201ENST00000384777 107 ntBASIC0.47□□□□□ -2.33
VPS35Q96QK1 RNU6-205P-201ENST00000390858 107 ntBASIC0.47□□□□□ -2.33
VPS35Q96QK1 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC0.47□□□□□ -2.33
VPS35Q96QK1 snoU13.18-201ENST00000459483 104 ntBASIC0.47□□□□□ -2.33
VPS35Q96QK1 RNU2-13P-201ENST00000515909 113 ntBASIC0.47□□□□□ -2.33
VPS35Q96QK1 RNU6-875P-201ENST00000516488 106 ntBASIC0.47□□□□□ -2.33
VPS35Q96QK1 Z83818.1-201ENST00000603584 150 ntBASIC0.47□□□□□ -2.33
VPS35Q96QK1 AC006157.1-201ENST00000611750 366 ntBASIC0.47□□□□□ -2.33
VPS35Q96QK1 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.46□□□□□ -2.34
VPS35Q96QK1 Y_RNA.263-201ENST00000364659 114 ntBASIC0.46□□□□□ -2.34
VPS35Q96QK1 RNU6-580P-201ENST00000365159 107 ntBASIC0.46□□□□□ -2.34
VPS35Q96QK1 MIR573-201ENST00000384964 99 ntBASIC0.46□□□□□ -2.34
VPS35Q96QK1 RNU6-1009P-201ENST00000390996 107 ntBASIC0.46□□□□□ -2.34
VPS35Q96QK1 snoU13.21-201ENST00000459368 105 ntBASIC0.46□□□□□ -2.34
VPS35Q96QK1 RNU6-191P-201ENST00000516295 94 ntBASIC0.46□□□□□ -2.34
VPS35Q96QK1 Y_RNA.58-201ENST00000362807 102 ntBASIC0.45□□□□□ -2.34
VPS35Q96QK1 Y_RNA.154-201ENST00000363624 102 ntBASIC0.45□□□□□ -2.34
VPS35Q96QK1 RNU6-899P-201ENST00000363947 107 ntBASIC0.45□□□□□ -2.34
VPS35Q96QK1 RNY3P1-201ENST00000365085 102 ntBASIC0.45□□□□□ -2.34
VPS35Q96QK1 Y_RNA.315-201ENST00000365117 102 ntBASIC0.45□□□□□ -2.34
VPS35Q96QK1 Y_RNA.418-201ENST00000384029 102 ntBASIC0.45□□□□□ -2.34
VPS35Q96QK1 RNU6-125P-201ENST00000384505 107 ntBASIC0.45□□□□□ -2.34
VPS35Q96QK1 RNU6-308P-201ENST00000390957 107 ntBASIC0.45□□□□□ -2.34
VPS35Q96QK1 RNU6-177P-201ENST00000411257 104 ntBASIC0.45□□□□□ -2.34
VPS35Q96QK1 AC114737.2-201ENST00000421583 173 ntBASIC0.45□□□□□ -2.34
VPS35Q96QK1 AC082651.2-201ENST00000496833 166 ntBASIC0.45□□□□□ -2.34
VPS35Q96QK1 RNU6-475P-201ENST00000516073 104 ntBASIC0.45□□□□□ -2.34
VPS35Q96QK1 RNU7-25P-201ENST00000516544 62 ntBASIC0.45□□□□□ -2.34
VPS35Q96QK1 MIR4264-201ENST00000583520 66 ntBASIC0.45□□□□□ -2.34
VPS35Q96QK1 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.45□□□□□ -2.34
VPS35Q96QK1 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.44□□□□□ -2.34
VPS35Q96QK1 Y_RNA.222-201ENST00000364264 102 ntBASIC0.44□□□□□ -2.34
VPS35Q96QK1 MIR520H-201ENST00000385126 88 ntBASIC0.44□□□□□ -2.34
VPS35Q96QK1 MIR140-201ENST00000385282 100 ntBASIC0.44□□□□□ -2.34
VPS35Q96QK1 MIR936-201ENST00000401264 98 ntBASIC0.44□□□□□ -2.34
VPS35Q96QK1 SNORD83.1-201ENST00000411362 77 ntBASIC0.44□□□□□ -2.34
VPS35Q96QK1 AC098934.3-201ENST00000430450 190 ntBASIC0.44□□□□□ -2.34
VPS35Q96QK1 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.44□□□□□ -2.34
VPS35Q96QK1 RNU6-1132P-201ENST00000459214 107 ntBASIC0.44□□□□□ -2.34
VPS35Q96QK1 RNU6-496P-201ENST00000516145 99 ntBASIC0.44□□□□□ -2.34
VPS35Q96QK1 RNU6-1046P-201ENST00000516538 107 ntBASIC0.44□□□□□ -2.34
VPS35Q96QK1 RNU6-229P-201ENST00000516614 102 ntBASIC0.44□□□□□ -2.34
VPS35Q96QK1 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.44□□□□□ -2.34
VPS35Q96QK1 uc_338.4-201ENST00000616635 176 ntBASIC0.44□□□□□ -2.34
VPS35Q96QK1 MIR6515-201ENST00000619843 57 ntBASIC0.44□□□□□ -2.34
VPS35Q96QK1 MIR5087-201ENST00000635826 76 ntBASIC0.44□□□□□ -2.34
VPS35Q96QK1 SNORD18A-201ENST00000363753 72 ntBASIC0.43□□□□□ -2.34
VPS35Q96QK1 RNU6-934P-201ENST00000365154 107 ntBASIC0.43□□□□□ -2.34
VPS35Q96QK1 Y_RNA.547-201ENST00000384654 119 ntBASIC0.43□□□□□ -2.34
VPS35Q96QK1 MIR520F-201ENST00000384824 87 ntBASIC0.43□□□□□ -2.34
VPS35Q96QK1 MIR548O-201ENST00000408583 114 ntBASIC0.43□□□□□ -2.34
VPS35Q96QK1 AC023449.1-201ENST00000454464 154 ntBASIC0.43□□□□□ -2.34
VPS35Q96QK1 RNA5SP436-201ENST00000516020 115 ntBASIC0.43□□□□□ -2.34
VPS35Q96QK1 RN7SKP12-201ENST00000516275 143 ntBASIC0.43□□□□□ -2.34
VPS35Q96QK1 RNU6-977P-201ENST00000516411 103 ntBASIC0.43□□□□□ -2.34
VPS35Q96QK1 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
VPS35Q96QK1 MIR4771-2-201ENST00000577758 74 ntBASIC0.43□□□□□ -2.34
VPS35Q96QK1 MIR4711-201ENST00000578274 70 ntBASIC0.43□□□□□ -2.34
VPS35Q96QK1 MIR4771-1-201ENST00000582617 74 ntBASIC0.43□□□□□ -2.34
VPS35Q96QK1 AC007485.1-201ENST00000616755 206 ntBASIC0.43□□□□□ -2.34
VPS35Q96QK1 AC022140.2-201ENST00000623500 188 ntBASIC0.43□□□□□ -2.34
VPS35Q96QK1 AC112487.2-201ENST00000637950 304 ntBASIC0.43□□□□□ -2.34
VPS35Q96QK1 SNORD113-8-201ENST00000363497 74 ntBASIC0.42□□□□□ -2.34
VPS35Q96QK1 RNU6-1205P-201ENST00000363625 106 ntBASIC0.42□□□□□ -2.34
VPS35Q96QK1 RNU6-763P-201ENST00000390865 106 ntBASIC0.42□□□□□ -2.34
VPS35Q96QK1 Y_RNA.579-201ENST00000390939 94 ntBASIC0.42□□□□□ -2.34
VPS35Q96QK1 MIR1302-11-201ENST00000408051 138 ntBASIC0.42□□□□□ -2.34
VPS35Q96QK1 MIR1302-9-201ENST00000408365 138 ntBASIC0.42□□□□□ -2.34
VPS35Q96QK1 MIR1302-10-201ENST00000408734 138 ntBASIC0.42□□□□□ -2.34
VPS35Q96QK1 AC015818.7-201ENST00000428754 109 ntBASIC0.42□□□□□ -2.34
VPS35Q96QK1 AC087499.7-201ENST00000441958 109 ntBASIC0.42□□□□□ -2.34
VPS35Q96QK1 snoU13.16-201ENST00000459350 104 ntBASIC0.42□□□□□ -2.34
VPS35Q96QK1 AC107297.1-201ENST00000459991 176 ntBASIC0.42□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 256.6 ms