Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 Y_RNA.376-201ENST00000365638 108 ntBASIC1.25□□□□□ -2.21
NEK1Q96PY6 MIR136-201ENST00000385207 82 ntBASIC1.25□□□□□ -2.21
NEK1Q96PY6 RNU6-383P-201ENST00000410864 94 ntBASIC1.25□□□□□ -2.21
NEK1Q96PY6 HMGN2P32-201ENST00000444648 269 ntBASIC1.25□□□□□ -2.21
NEK1Q96PY6 RPL39P39-201ENST00000455840 151 ntBASIC1.25□□□□□ -2.21
NEK1Q96PY6 AC090142.3-201ENST00000519012 385 ntBASIC1.25□□□□□ -2.21
NEK1Q96PY6 MIR5692C2-201ENST00000577959 77 ntBASIC1.25□□□□□ -2.21
NEK1Q96PY6 AC007742.2-201ENST00000618226 398 ntBASIC1.25□□□□□ -2.21
NEK1Q96PY6 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.25□□□□□ -2.21
NEK1Q96PY6 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.24□□□□□ -2.21
NEK1Q96PY6 RNU6-969P-201ENST00000383900 105 ntBASIC1.24□□□□□ -2.21
NEK1Q96PY6 RNU6-144P-201ENST00000383951 107 ntBASIC1.24□□□□□ -2.21
NEK1Q96PY6 Y_RNA.459-201ENST00000384251 102 ntBASIC1.24□□□□□ -2.21
NEK1Q96PY6 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.24□□□□□ -2.21
NEK1Q96PY6 NDUFA4P2-201ENST00000489989 244 ntBASIC1.24□□□□□ -2.21
NEK1Q96PY6 RNU7-40P-201ENST00000516397 64 ntBASIC1.24□□□□□ -2.21
NEK1Q96PY6 RNU6-113P-201ENST00000516653 101 ntBASIC1.24□□□□□ -2.21
NEK1Q96PY6 RN7SL793P-201ENST00000583259 296 ntBASIC1.24□□□□□ -2.21
NEK1Q96PY6 snoU18.1-201ENST00000629629 71 ntBASIC1.24□□□□□ -2.21
NEK1Q96PY6 Y_RNA.145-201ENST00000363527 102 ntBASIC1.23□□□□□ -2.21
NEK1Q96PY6 SNORA70.7-201ENST00000384159 133 ntBASIC1.23□□□□□ -2.21
NEK1Q96PY6 AL133373.1-201ENST00000497098 94 ntBASIC1.23□□□□□ -2.21
NEK1Q96PY6 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.23□□□□□ -2.21
NEK1Q96PY6 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.23□□□□□ -2.21
NEK1Q96PY6 SNORA18.7-201ENST00000516910 131 ntBASIC1.23□□□□□ -2.21
NEK1Q96PY6 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.23□□□□□ -2.21
NEK1Q96PY6 AC087685.1-201ENST00000587507 141 ntBASIC1.23□□□□□ -2.21
NEK1Q96PY6 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
NEK1Q96PY6 MIR367-201ENST00000362299 68 ntBASIC1.22□□□□□ -2.21
NEK1Q96PY6 Y_RNA.176-201ENST00000363815 109 ntBASIC1.22□□□□□ -2.21
NEK1Q96PY6 Y_RNA.237-201ENST00000364439 102 ntBASIC1.22□□□□□ -2.21
NEK1Q96PY6 RNY1P4-201ENST00000384595 115 ntBASIC1.22□□□□□ -2.21
NEK1Q96PY6 MIR1302-6-201ENST00000408466 90 ntBASIC1.22□□□□□ -2.21
NEK1Q96PY6 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.22□□□□□ -2.21
NEK1Q96PY6 MRPL35P3-201ENST00000421557 364 ntBASIC1.22□□□□□ -2.21
NEK1Q96PY6 AC023449.1-201ENST00000454464 154 ntBASIC1.22□□□□□ -2.21
NEK1Q96PY6 AC048334.1-201ENST00000477975 159 ntBASIC1.22□□□□□ -2.21
NEK1Q96PY6 RPS23P4-201ENST00000487908 423 ntBASIC1.22□□□□□ -2.21
NEK1Q96PY6 SNORA31.2-201ENST00000516019 134 ntBASIC1.22□□□□□ -2.21
NEK1Q96PY6 SNORD111.1-201ENST00000516421 86 ntBASIC1.22□□□□□ -2.21
NEK1Q96PY6 RNU6-1007P-201ENST00000516586 107 ntBASIC1.22□□□□□ -2.21
NEK1Q96PY6 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.22□□□□□ -2.21
NEK1Q96PY6 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.22□□□□□ -2.21
NEK1Q96PY6 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.21□□□□□ -2.22
NEK1Q96PY6 Y_RNA.14-201ENST00000362415 103 ntBASIC1.21□□□□□ -2.22
NEK1Q96PY6 Y_RNA.217-201ENST00000364214 105 ntBASIC1.21□□□□□ -2.22
NEK1Q96PY6 RNU6-442P-201ENST00000383968 104 ntBASIC1.21□□□□□ -2.22
NEK1Q96PY6 RNU6-1289P-201ENST00000384431 106 ntBASIC1.21□□□□□ -2.22
NEK1Q96PY6 RNU6-738P-201ENST00000384531 106 ntBASIC1.21□□□□□ -2.22
NEK1Q96PY6 Y_RNA.574-201ENST00000384766 95 ntBASIC1.21□□□□□ -2.22
NEK1Q96PY6 Y_RNA.641-201ENST00000459414 105 ntBASIC1.21□□□□□ -2.22
NEK1Q96PY6 MIR4724-201ENST00000579485 89 ntBASIC1.21□□□□□ -2.22
NEK1Q96PY6 AL008718.3-201ENST00000610217 321 ntBASIC1.21□□□□□ -2.22
NEK1Q96PY6 AP001282.2-201ENST00000616149 309 ntBASIC1.21□□□□□ -2.22
NEK1Q96PY6 MIR8062-201ENST00000621515 85 ntBASIC1.21□□□□□ -2.22
NEK1Q96PY6 AC068700.1-201ENST00000565862 3754 ntBASIC1.2□□□□□ -2.22
NEK1Q96PY6 UBE2WP1-201ENST00000362030 340 ntBASIC1.2□□□□□ -2.22
NEK1Q96PY6 Y_RNA.117-201ENST00000363294 101 ntBASIC1.2□□□□□ -2.22
NEK1Q96PY6 RNU4-10P-201ENST00000364383 140 ntBASIC1.2□□□□□ -2.22
NEK1Q96PY6 Y_RNA.461-201ENST00000384263 103 ntBASIC1.2□□□□□ -2.22
NEK1Q96PY6 SNORD38C-201ENST00000384381 69 ntBASIC1.2□□□□□ -2.22
NEK1Q96PY6 MIR216A-201ENST00000385063 110 ntBASIC1.2□□□□□ -2.22
NEK1Q96PY6 SNORD72-201ENST00000390994 80 ntBASIC1.2□□□□□ -2.22
NEK1Q96PY6 SNORD11-201ENST00000459124 84 ntBASIC1.2□□□□□ -2.22
NEK1Q96PY6 RNA5SP436-201ENST00000516020 115 ntBASIC1.2□□□□□ -2.22
NEK1Q96PY6 SNORA31.4-201ENST00000516049 129 ntBASIC1.2□□□□□ -2.22
NEK1Q96PY6 AC008507.4-201ENST00000585464 127 ntBASIC1.2□□□□□ -2.22
NEK1Q96PY6 AL360085.1-201ENST00000604713 532 ntBASIC1.2□□□□□ -2.22
NEK1Q96PY6 U6.104-201ENST00000637979 90 ntBASIC1.2□□□□□ -2.22
NEK1Q96PY6 Y_RNA.44-201ENST00000362676 108 ntBASIC1.19□□□□□ -2.22
NEK1Q96PY6 RNU4-38P-201ENST00000364472 129 ntBASIC1.19□□□□□ -2.22
NEK1Q96PY6 RNU6-211P-201ENST00000384047 107 ntBASIC1.19□□□□□ -2.22
NEK1Q96PY6 Y_RNA.483-201ENST00000384380 101 ntBASIC1.19□□□□□ -2.22
NEK1Q96PY6 SNORA25-201ENST00000384384 134 ntBASIC1.19□□□□□ -2.22
NEK1Q96PY6 MIR520C-201ENST00000385005 87 ntBASIC1.19□□□□□ -2.22
NEK1Q96PY6 SNORA74.3-201ENST00000517108 154 ntBASIC1.19□□□□□ -2.22
NEK1Q96PY6 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.19□□□□□ -2.22
NEK1Q96PY6 MIR5000-201ENST00000577717 103 ntBASIC1.19□□□□□ -2.22
NEK1Q96PY6 AL049861.1-201ENST00000603130 150 ntBASIC1.19□□□□□ -2.22
NEK1Q96PY6 HSPE1P19-201ENST00000603327 295 ntBASIC1.19□□□□□ -2.22
NEK1Q96PY6 AL096861.1-201ENST00000610899 123 ntBASIC1.19□□□□□ -2.22
NEK1Q96PY6 Y_RNA.275-201ENST00000364726 110 ntBASIC1.18□□□□□ -2.22
NEK1Q96PY6 MIR15B-201ENST00000385045 98 ntBASIC1.18□□□□□ -2.22
NEK1Q96PY6 MT-TW-201ENST00000387382 68 ntBASIC1.18□□□□□ -2.22
NEK1Q96PY6 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
NEK1Q96PY6 RNU6-910P-201ENST00000390844 107 ntBASIC1.18□□□□□ -2.22
NEK1Q96PY6 MIR548F4-201ENST00000408515 105 ntBASIC1.18□□□□□ -2.22
NEK1Q96PY6 RNU6-1054P-201ENST00000411293 104 ntBASIC1.18□□□□□ -2.22
NEK1Q96PY6 AC245047.7-201ENST00000440265 293 ntBASIC1.18□□□□□ -2.22
NEK1Q96PY6 SNORA70.22-201ENST00000517160 124 ntBASIC1.18□□□□□ -2.22
NEK1Q96PY6 AL117187.1-201ENST00000555482 181 ntBASIC1.18□□□□□ -2.22
NEK1Q96PY6 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.18□□□□□ -2.22
NEK1Q96PY6 AC006006.1-201ENST00000603082 144 ntBASIC1.18□□□□□ -2.22
NEK1Q96PY6 AL022345.2-201ENST00000606307 135 ntBASIC1.18□□□□□ -2.22
NEK1Q96PY6 BX284668.6-201ENST00000606899 438 ntBASIC1.18□□□□□ -2.22
NEK1Q96PY6 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
NEK1Q96PY6 Y_RNA.47-201ENST00000362697 108 ntBASIC1.17□□□□□ -2.22
NEK1Q96PY6 RNU6-268P-201ENST00000364174 107 ntBASIC1.17□□□□□ -2.22
NEK1Q96PY6 RNU6-740P-201ENST00000364734 105 ntBASIC1.17□□□□□ -2.22
NEK1Q96PY6 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms